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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g082950.3.1
CDS Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7JKP3_MEDTR)
Sequence

ATGAATGGAAGACCAGTACTTTTCGGCTCTAGTTTAAAGAACAAGGGAATGTGTATTCAG
CTAAGTTTTCAGTTGCTGGTAGTGACTATCACTGCAGTTTTAGTTCTTACGGTTTTGTCG
ATGTCCAGAGGTATTGGTCAAGCTCCAAAGTTAGTCGAGAAGCAGACCCAGATAAGCTCG
TTATCTAGCTGTAATTTCTATTCTGGTAAATGGGTATTTGATAATCAATCTCGCCCTCTG
TATAATGGGACAAATTGTTCGTTCATGGATGATGGAATGGCTTGTCAGAAGTTTGGGAGA
AAGAATCTTGACTATCTCTACTGGAAATGGCAACCCAATGATTGTGACCTTCCTAGATTT
AATGCTACGGCTATGCTGGAGAAGTTGAGGAACAAAAGGGTTGTTTATGTGGGAGATTCA
CTCAATAGGAATCAATGGGTTTCAATGGTCTGCATATTAGAATCAGAAATTCCTAATCAT
CTCAAATATGTTAACTATAATGGCTCTTTGGTCACCTTTAAAGCTATTGAGTACAATGCT
ACTATTGATTTCTACTGGGCACCATTATTAGTTGAATCAAATTGCGACGATCCATCATAT
CATCGTGTGGAAGAACGCATAGTGAGAATCGATTCGATAGAAAAACATGCCAGAATTTGG
AATGATGCTGATGTGCTAGTTTTTAATTCATATCTATGGTGGAGATTGAATTTGAAGGTT
CTGTGGGGATCTTTTGAAAGTGCAAATGCAAAGTATGAATATTTAGGGATGCTGCGTACA
TACGAATTGGGGCTACAGACATGGGCAGATTGGTTGGATACTCATGTTAATCGCTCCAAG
ACTCGAGTTTTCTTTGTTAGTTTATCACCTACACACAACAGGGGAGAAGATTGGGGGAAA
GCAAATGGTCAGAACTGCTACGATGAAACAGAACCGATAACTAATAGAGAGTATTGGGGA
TCAGATTCAGATCCAAAGATGATGAAATTGGTGGAATCGGTCATCAAGAAACTGAATGAG
AAGAGTGGTTTCAAAGTTGAGTTGCTCAACATTACTCAACTTTCTGAATATAGAAAGGAA
GGTCATTCATCAATATACAGAAAGCACTGGGATCCTCTAACCAAAGAACAATTGGCAAAT
CCAAGTAGTTATGCAGATTGTATACATTGGTGCCTTCCTGGAGTTCCTGATGTTTGGAAT
CATTTTTTATATACACACCTAGTTTACTTGTGA

Peptide Sequence

PEP ID

Solyc02g082950.3.1
PEP Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7JKP3_MEDTR)
Sequence

MNGRPVLFGSSLKNKGMCIQLSFQLLVVTITAVLVLTVLSMSRGIGQAPKLVEKQTQISS
LSSCNFYSGKWVFDNQSRPLYNGTNCSFMDDGMACQKFGRKNLDYLYWKWQPNDCDLPRF
NATAMLEKLRNKRVVYVGDSLNRNQWVSMVCILESEIPNHLKYVNYNGSLVTFKAIEYNA
TIDFYWAPLLVESNCDDPSYHRVEERIVRIDSIEKHARIWNDADVLVFNSYLWWRLNLKV
LWGSFESANAKYEYLGMLRTYELGLQTWADWLDTHVNRSKTRVFFVSLSPTHNRGEDWGK
ANGQNCYDETEPITNREYWGSDSDPKMMKLVESVIKKLNEKSGFKVELLNITQLSEYRKE
GHSSIYRKHWDPLTKEQLANPSSYADCIHWCLPGVPDVWNHFLYTHLVYL*

Transcript Sequence

Transcript ID

Solyc02g082950.3.1
Transcript Infomation

Trichome birefringence-like protein (AHRD V3.3 *** G7JKP3_MEDTR)
Sequence

ATGAATGGAAGACCAGTACTTTTCGGCTCTAGTTTAAAGAACAAGGGAATGTGTATTCAG
CTAAGTTTTCAGTTGCTGGTAGTGACTATCACTGCAGTTTTAGTTCTTACGGTTTTGTCG
ATGTCCAGAGGTATTGGTCAAGCTCCAAAGTTAGTCGAGAAGCAGACCCAGATAAGCTCG
TTATCTAGCTGTAATTTCTATTCTGGTAAATGGGTATTTGATAATCAATCTCGCCCTCTG
TATAATGGGACAAATTGTTCGTTCATGGATGATGGAATGGCTTGTCAGAAGTTTGGGAGA
AAGAATCTTGACTATCTCTACTGGAAATGGCAACCCAATGATTGTGACCTTCCTAGATTT
AATGCTACGGCTATGCTGGAGAAGTTGAGGAACAAAAGGGTTGTTTATGTGGGAGATTCA
CTCAATAGGAATCAATGGGTTTCAATGGTCTGCATATTAGAATCAGAAATTCCTAATCAT
CTCAAATATGTTAACTATAATGGCTCTTTGGTCACCTTTAAAGCTATTGAGTACAATGCT
ACTATTGATTTCTACTGGGCACCATTATTAGTTGAATCAAATTGCGACGATCCATCATAT
CATCGTGTGGAAGAACGCATAGTGAGAATCGATTCGATAGAAAAACATGCCAGAATTTGG
AATGATGCTGATGTGCTAGTTTTTAATTCATATCTATGGTGGAGATTGAATTTGAAGGTT
CTGTGGGGATCTTTTGAAAGTGCAAATGCAAAGTATGAATATTTAGGGATGCTGCGTACA
TACGAATTGGGGCTACAGACATGGGCAGATTGGTTGGATACTCATGTTAATCGCTCCAAG
ACTCGAGTTTTCTTTGTTAGTTTATCACCTACACACAACAGGGGAGAAGATTGGGGGAAA
GCAAATGGTCAGAACTGCTACGATGAAACAGAACCGATAACTAATAGAGAGTATTGGGGA
TCAGATTCAGATCCAAAGATGATGAAATTGGTGGAATCGGTCATCAAGAAACTGAATGAG
AAGAGTGGTTTCAAAGTTGAGTTGCTCAACATTACTCAACTTTCTGAATATAGAAAGGAA
GGTCATTCATCAATATACAGAAAGCACTGGGATCCTCTAACCAAAGAACAATTGGCAAAT
CCAAGTAGTTATGCAGATTGTATACATTGGTGCCTTCCTGGAGTTCCTGATGTTTGGAAT
CATTTTTTATATACACACCTAGTTTACTTGTGATCCATACACAACGCTACTAATTGGTAC
AAAAAAAAGATAGAATTAGTTTATTCTTGAATGAACTGAATCACCTTCATAGTTCAAGAT
TCAATTAGTGCACCATGTTGTTTATGAAAAAAGGTTTATATATACATGTTTATATCAAAT
CAAATAATGCAAGAAGTGTTTTTGTAGTTATATTCTCACTTTAAGTTTGTGATTCTTGTA
GCTAAATGAATTGCGTCATTCTTTTTGTAACAACCTA