Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g082880.2.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

ATGAATCCTTTTTTCAATATTTCAAGATTGAATGGGTTGTTACATGCTCTAAACAGAGTT
CGAGTTCACCCCATTTTGAGTCAGAGGTCTCGTTATTTGTCCCAAATTATTCATGAGAAT
GTTGAAACTCACCCATGGGAATCCATGGAGGGACTAATGAGGTGTTCAGCTAATTATTTC
CCTTTAACACCCATTAGTTTCTTGGACAGAGCTGCTAAGGTTTTTAGAGACAGGACTTCT
GTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAG
ATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTTGCAACGCTGGCT
CCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTT
TGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAA
GCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCTT
CTTGCAGATGCTAAAACAAAACCTCTTCTAATATTAATCCCTGATCCTGAAAATCTACCG
CCTCCTGTTGCTGCTCCCAATGTTCATGAATATGAAACTCTTCTGGCAAGTGGGCGCGAT
GATTTTGCTATAAAGTGGCCGTTAACTGAATTTGACCCTATTAGTGTCAACTATACTTCT
GGGACAACGTCACATCCTAAAGGAGTCGTTTACAATCATAGAGGTGCATATCTCAATGCT
ATTGCAACTCCTTATACTCATGAGATGGGCTCTATGCCTACTTATCTTTGGACTGTTCCA
ATGTTTCACTGTAACGGATGGAGCCTTACTTGGGGCGTGGCTGCACTTGGTGGCACGAAT
GTATGCCTAAGACGTGTCTCTCCTAAGGACATTTTTGAGAATATATCCCTCCACAAGGTC
ACACATATGAGTGCTGCACCAACGGTCATGAATATGATTGTAAATTCACCAAGAAGTGAC
CGCAAACCACTTCCTCACAAGGTTGAAATAACGACAGGTGGTTCACCACCGCCTCCTCAT
ATCATTTCCAAGATGGAGGAGTTAGGCTTTTCGGTATCTCATATATATGGTCTCACAGAG
ATTCATGGTCCCTGTATGTCTTGCCTTCATCAGCCAGAGTGGGAATCATTACCTCCTGAT
GAACGATTTGCTCTGAAAGCAAGACAAGGAGTGGAGCACTATTTTACGCAGGGAATTGAC
ATAAGAGATCCTGATACAATGGAGATGGTTCCAGATGATGGAAAGACCCTTGGTGAAATT
ATGATTAAAGGGAACACTGTGATGAGTGGATACTTGAAAAATGTTAAAGCAACAGAAGAA
GTGTTCAGAGGTGGATGGTTTCATACTGGCGATCTTGCTGTGAGACATCCAGATGGCTAC
ATAGAAGTTAAGGACCGGATGAAGGACATTATAATCTCTGGAGGTGAAAATATTTGCTCG
GTTGAGGTGGAAAGAGTTTTGGTCAGTCATCCTGCAGTCCTTGAAGCAGCTGTAGTAGCA
AGACCAGATGATCACTGGGGGCAGACACCTTGTGCTTTCGTGAAGTTGAAGGAAGGATTT
AGTCTTGGCTCTGAAGATATAATCAACTATTGTCGGGATCATTTGCCTCATTATATGGCT
CCCCGGACAGTCATATTTGAAGATCTACCAACAACTTCTACGGGCAAGATACAAAAGTTT
GTCCTAAGGGAAAAAGCAAAAGCCTTAGGCAGTCTTTGTGAAATCAAAAGAGAGATTGCA
GTCTGA

Peptide Sequence

PEP ID

Solyc02g082880.2.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

MNPFFNISRLNGLLHALNRVRVHPILSQRSRYLSQIIHENVETHPWESMEGLMRCSANYF
PLTPISFLDRAAKVFRDRTSVVYGSSVKFTWEETHNRCLKMASALSQLGISRGDVVATLA
PNVPAVQELHFAVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDQQLFDVAQGALDL
LADAKTKPLLILIPDPENLPPPVAAPNVHEYETLLASGRDDFAIKWPLTEFDPISVNYTS
GTTSHPKGVVYNHRGAYLNAIATPYTHEMGSMPTYLWTVPMFHCNGWSLTWGVAALGGTN
VCLRRVSPKDIFENISLHKVTHMSAAPTVMNMIVNSPRSDRKPLPHKVEITTGGSPPPPH
IISKMEELGFSVSHIYGLTEIHGPCMSCLHQPEWESLPPDERFALKARQGVEHYFTQGID
IRDPDTMEMVPDDGKTLGEIMIKGNTVMSGYLKNVKATEEVFRGGWFHTGDLAVRHPDGY
IEVKDRMKDIIISGGENICSVEVERVLVSHPAVLEAAVVARPDDHWGQTPCAFVKLKEGF
SLGSEDIINYCRDHLPHYMAPRTVIFEDLPTTSTGKIQKFVLREKAKALGSLCEIKREIA
V*

Transcript Sequence

Transcript ID

Solyc02g082880.2.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

AGACATGTATTTGTATAAAATCCCGTCACGCTAACTTTTGCTTGCTCGCTCACTCACTCA
TTTTCATCTATCATGAATCCTTTTTTCAATATTTCAAGATTGAATGGGTTGTTACATGCT
CTAAACAGAGTTCGAGTTCACCCCATTTTGAGTCAGAGGTCTCGTTATTTGTCCCAAATT
ATTCATGAGAATGTTGAAACTCACCCATGGGAATCCATGGAGGGACTAATGAGGTGTTCA
GCTAATTATTTCCCTTTAACACCCATTAGTTTCTTGGACAGAGCTGCTAAGGTTTTTAGA
GACAGGACTTCTGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAAT
AGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTT
GCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCA
GGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTG
AGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGA
GCACTGGATCTTCTTGCAGATGCTAAAACAAAACCTCTTCTAATATTAATCCCTGATCCT
GAAAATCTACCGCCTCCTGTTGCTGCTCCCAATGTTCATGAATATGAAACTCTTCTGGCA
AGTGGGCGCGATGATTTTGCTATAAAGTGGCCGTTAACTGAATTTGACCCTATTAGTGTC
AACTATACTTCTGGGACAACGTCACATCCTAAAGGAGTCGTTTACAATCATAGAGGTGCA
TATCTCAATGCTATTGCAACTCCTTATACTCATGAGATGGGCTCTATGCCTACTTATCTT
TGGACTGTTCCAATGTTTCACTGTAACGGATGGAGCCTTACTTGGGGCGTGGCTGCACTT
GGTGGCACGAATGTATGCCTAAGACGTGTCTCTCCTAAGGACATTTTTGAGAATATATCC
CTCCACAAGGTCACACATATGAGTGCTGCACCAACGGTCATGAATATGATTGTAAATTCA
CCAAGAAGTGACCGCAAACCACTTCCTCACAAGGTTGAAATAACGACAGGTGGTTCACCA
CCGCCTCCTCATATCATTTCCAAGATGGAGGAGTTAGGCTTTTCGGTATCTCATATATAT
GGTCTCACAGAGATTCATGGTCCCTGTATGTCTTGCCTTCATCAGCCAGAGTGGGAATCA
TTACCTCCTGATGAACGATTTGCTCTGAAAGCAAGACAAGGAGTGGAGCACTATTTTACG
CAGGGAATTGACATAAGAGATCCTGATACAATGGAGATGGTTCCAGATGATGGAAAGACC
CTTGGTGAAATTATGATTAAAGGGAACACTGTGATGAGTGGATACTTGAAAAATGTTAAA
GCAACAGAAGAAGTGTTCAGAGGTGGATGGTTTCATACTGGCGATCTTGCTGTGAGACAT
CCAGATGGCTACATAGAAGTTAAGGACCGGATGAAGGACATTATAATCTCTGGAGGTGAA
AATATTTGCTCGGTTGAGGTGGAAAGAGTTTTGGTCAGTCATCCTGCAGTCCTTGAAGCA
GCTGTAGTAGCAAGACCAGATGATCACTGGGGGCAGACACCTTGTGCTTTCGTGAAGTTG
AAGGAAGGATTTAGTCTTGGCTCTGAAGATATAATCAACTATTGTCGGGATCATTTGCCT
CATTATATGGCTCCCCGGACAGTCATATTTGAAGATCTACCAACAACTTCTACGGGCAAG
ATACAAAAGTTTGTCCTAAGGGAAAAAGCAAAAGCCTTAGGCAGTCTTTGTGAAATCAAA
AGAGAGATTGCAGTCTGAAGAGTACTTGAGACTATAAGCCTTATTCTTGTAACACTTGTT
TAGAAATTTCCAACATTAACTCTTGGCTCTTCTGTTTGTAATCTTATGCTTGAGGTCATA
CATAACAAAGCTTTTCTATGAATAAAAAAGGCTCAAGCATTGTCAGTGTGTACAATTGAT
TAACTTGACAATCTCTCTTCATCCAGTGTTTTCGACTAAAGAGAATTGG