Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g082840.3.1
CDS Infomation	Protein GRIP (AHRD V3.3 *** A0A0B2S9J7_GLYSO)
Sequence	ATGAAACAGTTTAATCCCTACTTCTCAGAAGCTAAAGAGGAAATAATGGAGGGAGATATT AGTAGTGGGGCTGCAGATAATCACACGGAAGATGCTAGCAAAACAGAGGCACAGTTCAAT AGCTTCAATATTGAGAGTGATCATGTAAAGGATAACGGAATATGTGAGAGTCACGAACAT ACAGGTGATAGCCATGATGATCTTGTACAAATGCTCGTAGAACTTAATTTCCAGAATGAA TATCTGAAATCTCAGATTGTGGGATGGCAAAGCATCAACATATATTCTGATGACTCTGGT CAACAAATTAAAACGGCTGCACATGAAAATGTGGCAAGTGATAATTCAGAAGACCTTAAT GAGAAGATCGAATCTTTGAATAGAGAACTTTTAGAGGAAAAGCAAACACGAGGTGCTGCA GAGGTAGCACTAAAGCATCTTCAAACTCTATATTTGGAAGCTGACACAAAGGCCCAAGAG TTGTCTGTCAAAGTTGCTGAAGTACAAAATAAGATGGATCAGGAAATAAAAGAACGTGAT GAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGACTTCACAAACGGGCAAAGCAGCGT ATTCAAGAGGTGCAAAAGGAAAAAGATGATCTTGAGGCCCAGTTTCGTGATGTCAATGAG AAATCTGAGCGCGCATCCTCGCAATTATCTGCATTGCAGCAAGAGTTGGAGCGCAGTAGA CAACACGCTCAGGAGGCACTGAAAGCAATGGATTTGGATAGGCAACAGTTAAGAAGTACA AACAACAAGCTCAGAGACAACATTGAAGAGCTGCGCCGTTCCTTGGCACCAAAAGAGAAT GCTCTGGAGGCATCACAACAGGCACTTCTAGAGAAAGAGCAGAAGTTAGAAGAGATGCAA GCATTACTGCAGGCAGCAGATGAGAAGAGACAAGCTTCAATTGAAGACCTCTCTTCAAAG CATCAGAAGCAAAAAGAGAGTCTGGAAGCCCAAATTGCTGAGGCATTGGCTGAAAGAAGC AAAGCAGCTGAAACAATCTCATCTCTGCGGACTGTGGTTGCAGAGAAGGAGTTTAAGATT GCAGAGATGGATGCAGCTTCCACTGGTGAAGCAGCAAGACTTAGAGCTGCTTTTGAAACA GTTAAAGGAGACATTGTTCATCTGAAAAGTGAACAAGAGAAAGAAAAAGAGAGTTGGGAA ACCACCTGCCATTCACTCAGAACAAAGCTGGAGATTGCTGAGAGTAACTGCATCCGTGCC GAGATTGAAGCGGCCAAATTTAGAAGTCAACTGGAGTCACAGTTATCTGCTCAGTCCCAG GTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCCAAAGAAGAGATCAATCGCACTCAA AGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCACTTCTCCAGCGAAAGGATGCTGAA TTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCACTGGAGGAAGCATTGAAGGAAGTG GAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGATAGAGCCCTTCAAGATCTAAAGAGC ACCTTAATTAATCATGAGAAGGAACTTTCGGACAGAGATGAAGCTCTTCGTGCTACAGAG CAACGGATCAGAAGCATGGAAATGAAGTTCAATTCTGCTATTTCTGCTCACCAAAAAGAG AAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAAGAAACATGGCGATTGAAATGTGAT GCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGATAATGTTCAAAAAGAACTAGATGAC CTCAAACAAAGCTGTAAAAAACTGAAGGAAGAGCTTGATTCTTTTCGTGACCTTGCTGAT AAGATGATTGAGGAGAAGGACAATGAAATCTCTAGACTTCTAGACGATAACGAGAACCTT CGCCACAAACTTCAGTCTGAATTTTTAGCCGATCGCAATGGCAATTCCAATACAGTATAT GACAAGCAAGATCCTCTGAATTCGACTACCTCAGCTGCTGATCAGCAGATTCTGGTCTTG GCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCTCAGTCACAACGTCACATTCTAGCC CTTCAAGAGGAGATAGAAGAGCTTGAACGTGAAAATCGTCTCCACAGCCAGCAGGAAGCT AAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCACAGAAGAGGGAAGGGGTAGATCTG ACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAGACAGGTGAAGTGGAGGCTCTATTA CCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAGGAGATGCGGAAGTGCCAACAAGCC TATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCAAAAGATACATCAGGATCGGGGAGC TCACTGTTTTCTAGATTCTCATTCTCTTAA

Peptide Sequence

PEP ID	Solyc02g082840.3.1
PEP Infomation	Protein GRIP (AHRD V3.3 *** A0A0B2S9J7_GLYSO)
Sequence	MKQFNPYFSEAKEEIMEGDISSGAADNHTEDASKTEAQFNSFNIESDHVKDNGICESHEH TGDSHDDLVQMLVELNFQNEYLKSQIVGWQSINIYSDDSGQQIKTAAHENVASDNSEDLN EKIESLNRELLEEKQTRGAAEVALKHLQTLYLEADTKAQELSVKVAEVQNKMDQEIKERD EKYSELDSKFNRLHKRAKQRIQEVQKEKDDLEAQFRDVNEKSERASSQLSALQQELERSR QHAQEALKAMDLDRQQLRSTNNKLRDNIEELRRSLAPKENALEASQQALLEKEQKLEEMQ ALLQAADEKRQASIEDLSSKHQKQKESLEAQIAEALAERSKAAETISSLRTVVAEKEFKI AEMDAASTGEAARLRAAFETVKGDIVHLKSEQEKEKESWETTCHSLRTKLEIAESNCIRA EIEAAKFRSQLESQLSAQSQVLNSKEAELMAAKEEINRTQSEFSSYKARAHALLQRKDAE LAAARDSEQLKALEEALKEVEKEVMSVSSERDRALQDLKSTLINHEKELSDRDEALRATE QRIRSMEMKFNSAISAHQKEKEAWEISLQNVEETWRLKCDAFKAESVVTSGDNVQKELDD LKQSCKKLKEELDSFRDLADKMIEEKDNEISRLLDDNENLRHKLQSEFLADRNGNSNTVY DKQDPLNSTTSAADQQILVLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEA KLKEELRNMDRSQKREGVDLTYLKNVILKLLETGEVEALLPVVAMLLQFSPEEMRKCQQA YRSSIEAQASPSKDTSGSGSSLFSRFSFS*

Transcript Sequence

Transcript ID	Solyc02g082840.3.1
Transcript Infomation	Protein GRIP (AHRD V3.3 *** A0A0B2S9J7_GLYSO)
Sequence	TACGCGATCTCAGAATTTTTCTTCCCCTGCTTTTTCTTTGCGGATTATTGAGATTTTTCT TTCTCGATTGATAGATACTCTTCTCAATAAAGGGATTTATTTAGTATTAGACACCGTTTC ACTCTTTTTGCCGCTTGGACATTTTACAAGCATCTAGATCTGCAGTTCCCCACTGCTTCA TCCATATTACTTCTCAGTTGATGGATGAAACAGTTTAATCCCTACTTCTCAGAAGCTAAA GAGGAAATAATGGAGGGAGATATTAGTAGTGGGGCTGCAGATAATCACACGGAAGATGCT AGCAAAACAGAGGCACAGTTCAATAGCTTCAATATTGAGAGTGATCATGTAAAGGATAAC GGAATATGTGAGAGTCACGAACATACAGGTGATAGCCATGATGATCTTGTACAAATGCTC GTAGAACTTAATTTCCAGAATGAATATCTGAAATCTCAGATTGTGGGATGGCAAAGCATC AACATATATTCTGATGACTCTGGTCAACAAATTAAAACGGCTGCACATGAAAATGTGGCA AGTGATAATTCAGAAGACCTTAATGAGAAGATCGAATCTTTGAATAGAGAACTTTTAGAG GAAAAGCAAACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTATATTTG GAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAGTACAAAATAAGATG GATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGA CTTCACAAACGGGCAAAGCAGCGTATTCAAGAGGTGCAAAAGGAAAAAGATGATCTTGAG GCCCAGTTTCGTGATGTCAATGAGAAATCTGAGCGCGCATCCTCGCAATTATCTGCATTG CAGCAAGAGTTGGAGCGCAGTAGACAACACGCTCAGGAGGCACTGAAAGCAATGGATTTG GATAGGCAACAGTTAAGAAGTACAAACAACAAGCTCAGAGACAACATTGAAGAGCTGCGC CGTTCCTTGGCACCAAAAGAGAATGCTCTGGAGGCATCACAACAGGCACTTCTAGAGAAA GAGCAGAAGTTAGAAGAGATGCAAGCATTACTGCAGGCAGCAGATGAGAAGAGACAAGCT TCAATTGAAGACCTCTCTTCAAAGCATCAGAAGCAAAAAGAGAGTCTGGAAGCCCAAATT GCTGAGGCATTGGCTGAAAGAAGCAAAGCAGCTGAAACAATCTCATCTCTGCGGACTGTG GTTGCAGAGAAGGAGTTTAAGATTGCAGAGATGGATGCAGCTTCCACTGGTGAAGCAGCA AGACTTAGAGCTGCTTTTGAAACAGTTAAAGGAGACATTGTTCATCTGAAAAGTGAACAA GAGAAAGAAAAAGAGAGTTGGGAAACCACCTGCCATTCACTCAGAACAAAGCTGGAGATT GCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGCGGCCAAATTTAGAAGTCAACTGGAG TCACAGTTATCTGCTCAGTCCCAGGTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCC AAAGAAGAGATCAATCGCACTCAAAGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCA CTTCTCCAGCGAAAGGATGCTGAATTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCA CTGGAGGAAGCATTGAAGGAAGTGGAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGAT AGAGCCCTTCAAGATCTAAAGAGCACCTTAATTAATCATGAGAAGGAACTTTCGGACAGA GATGAAGCTCTTCGTGCTACAGAGCAACGGATCAGAAGCATGGAAATGAAGTTCAATTCT GCTATTTCTGCTCACCAAAAAGAGAAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAA GAAACATGGCGATTGAAATGTGATGCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGAT AATGTTCAAAAAGAACTAGATGACCTCAAACAAAGCTGTAAAAAACTGAAGGAAGAGCTT GATTCTTTTCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAAATCTCTAGA CTTCTAGACGATAACGAGAACCTTCGCCACAAACTTCAGTCTGAATTTTTAGCCGATCGC AATGGCAATTCCAATACAGTATATGACAAGCAAGATCCTCTGAATTCGACTACCTCAGCT GCTGATCAGCAGATTCTGGTCTTGGCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCT CAGTCACAACGTCACATTCTAGCCCTTCAAGAGGAGATAGAAGAGCTTGAACGTGAAAAT CGTCTCCACAGCCAGCAGGAAGCTAAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCA CAGAAGAGGGAAGGGGTAGATCTGACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAG ACAGGTGAAGTGGAGGCTCTATTACCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAG GAGATGCGGAAGTGCCAACAAGCCTATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCA AAAGATACATCAGGATCGGGGAGCTCACTGTTTTCTAGATTCTCATTCTCTTAACAGCCA ATGAGGGCTGCAGAGATGCTTCCCAAATGTTGTCTTATCCAGCTTCAGTAGATAGTCTGT AGCAGACGTGGAAGGAGAGATACAGTAGAGGAATGTTTTGTGTTCTTATGTAATTAACAA AGAAATGCAAAAGAAGAACAAAACACAAAAAATGAGTAGGCATCCCTTGTCGTTCTTCAC ACGATATGTATATCAAAGGTATTTCGTTCTTCCTTTTTTTGTTTAATTGAGTGCAGAGAG AGAAGGAAGAGCACATTTGATAGAAATTGTAAAATTTTTGCGTAAGGAAACCAATTGAAC TGATGACTTCCCTAGAACTTCACTATTAAAAATAACATCTTTGGAGTATATATTTGCCAT ACT