Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g082100.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 - AT2G34920.2)
Sequence	ATGTATGTTTGGTTGTTTTTAATTCTGCTAATTTCTTCTTCAGACGAGTCAATTTTGAGA GATGGGTTGTTTTCAATTTGTAATGTTTTACTTTGGGGAACGTTGAAATGTTCAAAGTTT TCTCCTTTTTGTCAACAAACATTAAATATAGCATTCTTGATTGAGCAAGTTTCGCAAGAA ATGGCATCTTCTCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGAT CGTAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAA GATTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAAT ACTCATTCTTCGGATGCCAATGAAAATTCCCGGCAACACCGACATGTTGATTATGCAGAT TTATGGGTTCATAAACCGCAATGGGACAACAATGAGAACACTCCTACAACCGTTGATAAA TGGGATAGAGAAATGGTGATTTCTTCAAGGCCAACAAAACAGAAAGGAGAAGCGCTTGAA ACTACCACCGCAACCACCGTCGTCGAAGTTCCTAATTCAGGCGGTGTTTCTACTCTTGTC CGACGGTGGAGGGATTTTGAAACGGTGTCTAAGAGCGTGAATTTGGGGAACAATTCGAAT TCGAATCCGAGCAGCGCTAAAAGCAATTGTGAAAATGCTGCATTTGCGGACTCAAATGTA TCTCAGAGAGGAGATGATACATGTGATGAATCTTCAGTCGATGGACGATTTGAAACTCCG GCTGCAAGCGTGAATGGCGAATCGGCTGGGGATTGGGAACAGGTGTATAAAACTGCTATG AATGATATTCAGGGTTGTAAAAATTCAGATACTAATAAAGAAAGGGAAAAGCTTAGAGTT GCTGATATTATTAAGAAATTGGCAAGTAGTAATGGTGAAGAGAATCATGAGAATGAAAAC AATTGCACTAATGCTGCTCATCTTGCCACTGGTGAATGTTTGCCTCGTATTAAAACATCA TTTGATCATTCAGAGCAACAACTGCAACAAAGGAATTTTTTCCCGGTTCTGCATTCGCCT CGAATCATCAGAGGTCGAAAGGCATTAAGCGATTTGCTATTGCAAATGGAGCGTGACAGA CTCAGGGAACTTGACACTCTTAGGGAACGAAAGGCTGTTTCCAAGTTCCAACAAAGAGGT CGTATTCAGGCTTTGCTTAAAGTTAGATTCCTGCGTCGTGTCACAGACACCAGAGATGAT CGATCAACCAATGGCACATCATCCGAATCAAATAGAGTGTCTAGTTCTGCAATCATGCAT ATCAGGGAAAAGTTCAATACAGGAAGTCAAAATGGTGTATCTGACTCCAGAAGCCTCTCG AGAGAAGCAGCAGAGAACACCCAGGAAAACCGGAATTCCACACCAAATCAGCAAAGAGTA CAGAACAAAGGTAATAATGCTGTAAAAGTTGGAAGTGAATTAGCATCCCACAAGCAAAGA GAAGGGAACCAGAAGCAGGAGATTATCAGAGAGAGTGCTGCAATGCAGCCTGGTGTAGCT GACTCAAGAAGCAATAGCAGTCCTAAATCCGAAATTGCTTCTACATCTACACGAGAGGAT CATCCTGAGCCGATTGACCCAATGACTCTCTGCATAAATGTGATAGATAGCAATACACAA ATTGGAAAAGTTTTTCCATCCAATCAACTGCAAGAGGAGAATCCCCATGGGGAAGTCAAT AAGAAAATAAGTCCCCGAATGATGACAACAAATGTAAAAGCTACTAACTCATCAAATTCC CAGAAAGAAATGTCAATTCATATCCGACATTCTGACAGTTCTTATAGTCCGAAACATAAT GAGGTAGACTGTAGTCCTCAAGCAGTTAGCCCCAGTTTACTACATTGTACTTCACAACTG CACAGCTCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAAC CATGACAAGTCGCTGGAATTTTTAGAGACATCAAGATCTCCCAAGGATAGTGAACAAAGT GTCCATAGAGAAGAACACGATGCAAATAAACTGCAGCATGCAGGAACTAGTAATGAGTGG TCTAGTGAGAGCACCAAACCTCAAAGTGACTGTGAAGAGGAAGCTACCAACCAAAATCTA GTGGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAA CTACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCT CGTCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCC TTCCTAGAGAATCATGATATTCGCCAACTTCTTAACAGAAAAAGTGTTTCAATCTTTCTC AACAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCT AATGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGC AAGGAGGAGGAAGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAG GAAGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAA CAATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCG TGGAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGT GACGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTAC TCTCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATCGAAATGGAA CTGATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGA AGATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAG GTTGCAGCTGCAATAATTCAGTCAGGTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGT GCAAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGG TGTGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAA TGTCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGA

Peptide Sequence

PEP ID	Solyc02g082100.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 - AT2G34920.2)
Sequence	MYVWLFLILLISSSDESILRDGLFSICNVLLWGTLKCSKFSPFCQQTLNIAFLIEQVSQE MASSQVEIASSSSFGHVLRDRNRRDRCTHRDSNVFQKNLKDLVHTHIHSCISSSQPTNTN THSSDANENSRQHRHVDYADLWVHKPQWDNNENTPTTVDKWDREMVISSRPTKQKGEALE TTTATTVVEVPNSGGVSTLVRRWRDFETVSKSVNLGNNSNSNPSSAKSNCENAAFADSNV SQRGDDTCDESSVDGRFETPAASVNGESAGDWEQVYKTAMNDIQGCKNSDTNKEREKLRV ADIIKKLASSNGEENHENENNCTNAAHLATGECLPRIKTSFDHSEQQLQQRNFFPVLHSP RIIRGRKALSDLLLQMERDRLRELDTLRERKAVSKFQQRGRIQALLKVRFLRRVTDTRDD RSTNGTSSESNRVSSSAIMHIREKFNTGSQNGVSDSRSLSREAAENTQENRNSTPNQQRV QNKGNNAVKVGSELASHKQREGNQKQEIIRESAAMQPGVADSRSNSSPKSEIASTSTRED HPEPIDPMTLCINVIDSNTQIGKVFPSNQLQEENPHGEVNKKISPRMMTTNVKATNSSNS QKEMSIHIRHSDSSYSPKHNEVDCSPQAVSPSLLHCTSQLHSSDIPHDQASWENASCQAN HDKSLEFLETSRSPKDSEQSVHREEHDANKLQHAGTSNEWSSESTKPQSDCEEEATNQNL VDSDCGWVSDYSHTPSGWDELQSNYQQQLESNQDWINDVSRPREEWEGLRQERYQEMLDP FLENHDIRQLLNRKSVSIFLNSGLRDKIDQLMASRSQELPNARSGQLEKKVGARMTKEWG KEEEVISHIETRAAGVDDDEEEAYSGYEDDFEDDNNPIRQQYLKPEELVDQNKASHTLQS WRNNQDTLPSWSNDQDRGVSDDSYHRPSNSLPQPELSNIYSHHNQQSSSTSTRHPSIEME LIYELRGHMEQLHQEIFEIRRSINSCMNMQMNLQHSIKDEVAAAIIQSGPVIGSNSDKKG ANIANCCICYEQQVDSLLYRCGHMCTCFRCAHELLWGTGKCPICETPIIDVVRAYIHS*

Transcript Sequence

Transcript ID	Solyc02g082100.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 - AT2G34920.2)
Sequence	TTCCGAAAAGCATACGGCATGAATTACACTTTAACCATCCAAGTTTCTCTATTCAGAGTT GTTGGGGTTGGATTCATTAAAAGTTGCTTCAAGTAAACAAGAACCACTGTTTCAAGTGAA GCAGACATTGTTATCTTTTAAATAATGTAAAACATTAGAAAAAAATGAATACGAACAATT GATTTCTAGTTGTTTTAGATTAATTAACCCATATGACTTAGATTATTTATGATTTGGGAT CACATGAACTAAAAAATCAGTATCACCTATTTAATTAAAGCGCACATGTGACATCACATA ACTCCCTTATAAGGAGGAGCATTTATTTACCCGAATATTAATATTAAAGAAAAATTGGAT TTAATAGGTGTAAGAAAGTGATATTTTTAACTATTTTGAATACGTTAGGGATATCATTTG ACGATTGATTAAAAACTAAATATAATTTAAAACCTTTTTTCCAAATAATAACAAATAGGG TAAAGAATAGTTGAAGTAAAAAAGAATAGTGGCAGTGTGTGTAAGAAAAAAGGGTGACGC TCTCATGAGAAAAATAAAGGAATAGTTTGGCTTTACCGCAAAGTAGAAAAAAGAACCGAG TCATTTTTATAATCCAATCTTGACCCCACATTTTCCTCCAACGGCTCTAATCCAACGTCT CTCTATTCTCCCTTTTTCCATCTTCCCTCATTTTCCTATACCAAACTATGATACAACCCA CGCACATGCTCCTCCTTTCATTTTTTTCCGTTTGAATAATATATTTACATAGTATTTAAT AAGAATTTTTAATTTTTTTTTCTTATTTTGTGTTTAAATTATGATGCAAATGCAGAAACT ATTTGAGAATGATATTTTTTTAAAGCAATATTATAATTCGTGTTAGGTTATAATAAAATG ATATTACACAGTTCAAATAATTTGTAGATAATTAAATTAAATATTGAACAAGTAAAAATG GACGAATATTAACTTTACTCGATTGCAACTGTTTTATTTATGAATCACAACAAGAAGAGA GCACCGCACCACATGTCCCATTCCTCTGTTATTTCGTCTTCTTTAAGATATTATAGTTCC ACGAAGTTCCCATCTTTGTTTGTTTGCTCTTCACTTCACATCTACTCTCTCCTCTATATT CTCTCTCTTTATCTCCTTCATTCCTTTTTTTTTTCTTTTTTCCGTGTGGAATTTTCTGTT TGTGAAGAATGTTGATTGATTAACTTATCAAGATGAAAAAACAGAGAAATAACCGGCGAG ACTTGCGTTCTCTGCGTGTTTGACGTTTTAATTACCCAAAAACAACAGAGAGGCCAGACC CCCTTTTCTTCTCTTTGAGAGAAACAAATGGGTTGTTATTTTTGATATTGTTGAATGAAT GTATGTTTGGTTGTTTTTAATTCTGCTAATTTCTTCTTCAGACGAGTCAATTTTGAGAGA TGGGTTGTTTTCAATTTGTAATGTTTTACTTTGGGGAACGTTGAAATGTTCAAAGTTTTC TCCTTTTTGTCAACAAACATTAAATATAGCATTCTTGATTGAGCAAGTTTCGCAAGAAAT GGCATCTTCTCAGGTAGAAATTGCCTCTTCTTCTTCATTTGGTCATGTACTTAGAGATCG TAACAGGCGTGATCGATGTACTCATAGGGATTCCAATGTTTTCCAGAAGAATCTAAAAGA TTTGGTCCATACACATATCCATTCTTGTATTTCTTCAAGTCAACCCACAAATACGAATAC TCATTCTTCGGATGCCAATGAAAATTCCCGGCAACACCGACATGTTGATTATGCAGATTT ATGGGTTCATAAACCGCAATGGGACAACAATGAGAACACTCCTACAACCGTTGATAAATG GGATAGAGAAATGGTGATTTCTTCAAGGCCAACAAAACAGAAAGGAGAAGCGCTTGAAAC TACCACCGCAACCACCGTCGTCGAAGTTCCTAATTCAGGCGGTGTTTCTACTCTTGTCCG ACGGTGGAGGGATTTTGAAACGGTGTCTAAGAGCGTGAATTTGGGGAACAATTCGAATTC GAATCCGAGCAGCGCTAAAAGCAATTGTGAAAATGCTGCATTTGCGGACTCAAATGTATC TCAGAGAGGAGATGATACATGTGATGAATCTTCAGTCGATGGACGATTTGAAACTCCGGC TGCAAGCGTGAATGGCGAATCGGCTGGGGATTGGGAACAGGTGTATAAAACTGCTATGAA TGATATTCAGGGTTGTAAAAATTCAGATACTAATAAAGAAAGGGAAAAGCTTAGAGTTGC TGATATTATTAAGAAATTGGCAAGTAGTAATGGTGAAGAGAATCATGAGAATGAAAACAA TTGCACTAATGCTGCTCATCTTGCCACTGGTGAATGTTTGCCTCGTATTAAAACATCATT TGATCATTCAGAGCAACAACTGCAACAAAGGAATTTTTTCCCGGTTCTGCATTCGCCTCG AATCATCAGAGGTCGAAAGGCATTAAGCGATTTGCTATTGCAAATGGAGCGTGACAGACT CAGGGAACTTGACACTCTTAGGGAACGAAAGGCTGTTTCCAAGTTCCAACAAAGAGGTCG TATTCAGGCTTTGCTTAAAGTTAGATTCCTGCGTCGTGTCACAGACACCAGAGATGATCG ATCAACCAATGGCACATCATCCGAATCAAATAGAGTGTCTAGTTCTGCAATCATGCATAT CAGGGAAAAGTTCAATACAGGAAGTCAAAATGGTGTATCTGACTCCAGAAGCCTCTCGAG AGAAGCAGCAGAGAACACCCAGGAAAACCGGAATTCCACACCAAATCAGCAAAGAGTACA GAACAAAGGTAATAATGCTGTAAAAGTTGGAAGTGAATTAGCATCCCACAAGCAAAGAGA AGGGAACCAGAAGCAGGAGATTATCAGAGAGAGTGCTGCAATGCAGCCTGGTGTAGCTGA CTCAAGAAGCAATAGCAGTCCTAAATCCGAAATTGCTTCTACATCTACACGAGAGGATCA TCCTGAGCCGATTGACCCAATGACTCTCTGCATAAATGTGATAGATAGCAATACACAAAT TGGAAAAGTTTTTCCATCCAATCAACTGCAAGAGGAGAATCCCCATGGGGAAGTCAATAA GAAAATAAGTCCCCGAATGATGACAACAAATGTAAAAGCTACTAACTCATCAAATTCCCA GAAAGAAATGTCAATTCATATCCGACATTCTGACAGTTCTTATAGTCCGAAACATAATGA GGTAGACTGTAGTCCTCAAGCAGTTAGCCCCAGTTTACTACATTGTACTTCACAACTGCA CAGCTCAGATATTCCCCATGACCAAGCTAGCTGGGAAAATGCAAGCTGTCAAGCTAACCA TGACAAGTCGCTGGAATTTTTAGAGACATCAAGATCTCCCAAGGATAGTGAACAAAGTGT CCATAGAGAAGAACACGATGCAAATAAACTGCAGCATGCAGGAACTAGTAATGAGTGGTC TAGTGAGAGCACCAAACCTCAAAGTGACTGTGAAGAGGAAGCTACCAACCAAAATCTAGT GGACAGTGATTGTGGCTGGGTAAGTGATTATTCGCACACGCCAAGTGGATGGGATGAACT ACAGTCTAACTACCAGCAGCAATTAGAATCCAACCAAGACTGGATAAATGATGTTTCTCG TCCACGTGAAGAGTGGGAAGGTCTTAGGCAAGAAAGATACCAAGAGATGCTTGATCCCTT CCTAGAGAATCATGATATTCGCCAACTTCTTAACAGAAAAAGTGTTTCAATCTTTCTCAA CAGTGGTTTGAGAGACAAGATAGATCAACTAATGGCGTCTCGCTCACAAGAACTACCTAA TGCAAGGAGCGGCCAGCTTGAGAAAAAAGTAGGGGCACGTATGACTAAAGAATGGGGCAA GGAGGAGGAAGTGATATCACATATAGAAACACGAGCAGCCGGGGTTGATGATGATGAGGA AGAAGCGTACTCAGGTTATGAGGATGACTTTGAAGATGATAATAATCCAATTAGACAACA ATACCTTAAACCTGAGGAATTAGTTGATCAGAACAAAGCTTCACACACTTTACAGTCGTG GAGAAATAATCAGGACACTTTACCATCATGGAGTAATGATCAAGACAGGGGTGTCAGTGA CGACTCCTATCACCGTCCCTCTAATTCTTTACCACAGCCTGAATTATCCAACATTTACTC TCATCACAATCAACAAAGCTCCTCCACCTCCACTAGACACCCTTCAATCGAAATGGAACT GATATATGAATTGCGAGGACACATGGAGCAACTCCACCAAGAGATTTTTGAAATACGAAG ATCAATAAACAGTTGCATGAACATGCAAATGAATTTACAACATTCCATCAAGGACGAGGT TGCAGCTGCAATAATTCAGTCAGGTCCAGTGATTGGGAGTAACTCGGATAAGAAGGGTGC AAACATAGCAAATTGCTGTATTTGTTATGAGCAGCAAGTTGATTCTCTCCTTTACAGGTG TGGGCACATGTGCACCTGTTTCAGGTGTGCCCATGAATTGCTTTGGGGCACCGGAAAATG TCCGATATGTGAAACCCCTATTATAGATGTTGTCCGTGCATATATACACTCATGACGTAC AGGTTAACCGGATTTTGTTCTGCTGATGTCTAACTTTTTGCCCAATGAGAGATGAGCCGA AAGATGATTTTTCGTTTTCTTTTCCTTCTTTTTTTGGTTTTAATTGAATCTCGTGAGCCA TGGAACTGTTTTATGGCTAATTTATTTGTCTATAACAGGTTTAGATTTAGTGGATGAATG CTCACTCTCCCCTGGTTTTCACTAACCATCTTTTGTATACAATAGGAGAAAAGAAAGCAA AGTTCTTTCTATGACATTAGAAATTGTATATTTTCAAGCTCTTTGTAACAGCAATTCAAA TGAAAATTGGAAGAGTTCCTTACATGTAA