Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g081590.3.1
CDS Infomation

FACT complex subunit SPT16 (AHRD V3.3 *-* W9RSN6_9ROSA)
Sequence

ATGAAGAAAGAGCTTTTCGGGAAAAGGCTTACTGCCTTTTACAATAGTTTGATTTTCAAC
AAGAAAGATTCATGGGGGAACTCTGATGCTGTTGTAATCCATTCACAGCAACAAGAAAAT
CCGAATTCTCTGTCATCCCAGTTCTATTTATGGCTTATGGGTGAAAAACATGATGATACG
ACAGTAATCTTTACTCCTATTGGGATATTCTTTTTCTGTACACAGAAAAATTATTCCAAG
ATTCGATCTTTGAGTTGTTGTGCTACTGTGATGAGTAAACAGCCTGTTTCTGTTCAATTG
AAGGCCAAAAACGATGAGGGTTTTGCGTTCATCGACTCCACGATACGTCAAGCCAGGGTA
ATTCGTAACAGCAAGGGGTTTACTGGTGTTTTTGATGATGATTGTAATTGGCCGTTTGTT
GTGGGTTATATAGAAGGTGAGTACCCTAAGTCTAAGTTTTTTTGGAATTGTATGAATGAT
TTAGAACCCAAAAAGTATAAAGTAATTACTGTGGATTCTGGTATTAATAAGATGATTCAT
GCTGCTGATAAACCAATTTCTGGACGAGAATTAGAATTTTTGCAATCACTATTTACTACT
TTCTGTCCTGAAGACGAGAAACAACTGTTTTTCCGGGGAAATCAACCTGGTTTGTTGGTG
AAGGAAAAGAACGATCTTGAGTCTAAATTTGGACGTGTAGGCTTGAGTGAAAAGCGGAGG
AGCAATTTGGGTTCTGAATTTGACAAAACTAGACTCTTCTGCGGTGATAAATCAGTGAGC
GGGGTGGATGACCTCACTAAAAATGATTTAGATTTTCTTGAGATGCTGGGGAGTATTGAA
CGGTTCTCTTTGCCTAGGGAAGAACGGGATAAGTATAAGGTAGCAAACATGTCTCGTGAT
CACAAGGCAGGAAATAAAAATGGTGATCAGGTATTTAAGTCGGGGTCAAGTATTTTGGAT
GGTAGAAAGGACAAGTTAAAGGAAATAAGCAAACATGTTGATGATGTGTTCAAGTTTGGG
TCATCTAAATTGGATGCTAAAGACTTCAAATCAAAGACCTTTGGAGAAAGAAAGAAAGAC
GTCGATCAGCTGTTTCAGTTTGGAGAGCAGTGTAAGATTGGAGAGAAGCGAGGCAGGAAC
AATCAGCCTCAATTGGTAATGGAGGAGAACAAAGGCACAAAAGATGTCGAGCAACTTACA
GAAAAAATAACAGCCTTCTATTCCAGCTGGAGGAAATACAAAGAAGAGAAATGGGGAAAA
GCCGATGTTTTGGTGATTACTTCTCCATCAGTGGCACCAGTTGAAGATTGGTCTCGTAGC
TTCTTAGTGTGGTTGCTGGATGGTGAGTTTCTGGATACCACAGCTGTTTTTACGGACACA
GGAATTGAATTTCTTTGCACCAAGGAAAGTTTCTTCAGGCTTCGTACAATTGGAATTTGT
ATGACAAAGATTGCAAAGCTAACTGTTTCTGTCCAACTGAAGAAACGAGGAGAACAATGT
GTAGATTGGTTAAAAAAGACTTTGAGGCAGGTAAATACTGCGGCGAAGTCTAAACCTAAC
TGGTGCCCACTTGTTGTTGGCTGCATTTTCGGGGAGTCTGGGGAGATAGAGGTTCTTTCA
CGTTCCAGAATGTTTGAAGTTGCATATGTAAACAATGCTTTAACCGACCTGCTTGAACAG
GGGAATTTTGTAAAAGCAGAAAGGTTTGCAGCTCAACAGTCAACTTTACCTAAGCAATTT
CAGATGCTGTCTTTGGGAACACGTGGCAGTGCAAATACTGCAAATGCTGTATCATTTTCT
GAGTTAGCCAAAATTAGGTCGATGGATGATAATTCTTATTTGTCAGAAGAATTACTCCGT
GATGCAAAAACTCCTACTGACGGTAGAGTAGATAATGGAGGACCAGTTGAGCAAACCAAA
CCTGAAGAAAACAAGGAGGACAATTCATCAAGAAAACTTGCAGATAAGATGATGTTGCTT
GATATAAAGGAGGGTGATGTGGAAACCTCTATCACAGAGGACAGTGCAGAAGAAAATCCA
TTGTGTATGTTATTTAATGATGAAAATAGTCCCTTGCTGCAAGTGAAGGAGCGTGGAGAG
CAATCTGGACCAACTGCAGAAGGAGGAATTGATTACAGTGTCCAGCCAACTGGTGTTATA
GATGCTGCATCAGAAAGTTCTTTACCCGATGATAACAATGGCATCTCGAGGAAGGACTCT
GTTGGTTCTGATGATGATTGGACATTAGTTGAGATGGAGTGTCAAGGGAAAGAAACAGAA
GTAGCCGAGAGAGTCAGCTGGGGAAGGTGGTTCATGGGTAAAACTGGAAAATCATTTGGT
TTTAAAGACGAGGTGACCGATGAAGCACCATCAAAGAGGACCAAGGCTGATCCATGA

Peptide Sequence

PEP ID

Solyc02g081590.3.1
PEP Infomation

FACT complex subunit SPT16 (AHRD V3.3 *-* W9RSN6_9ROSA)
Sequence

MKKELFGKRLTAFYNSLIFNKKDSWGNSDAVVIHSQQQENPNSLSSQFYLWLMGEKHDDT
TVIFTPIGIFFFCTQKNYSKIRSLSCCATVMSKQPVSVQLKAKNDEGFAFIDSTIRQARV
IRNSKGFTGVFDDDCNWPFVVGYIEGEYPKSKFFWNCMNDLEPKKYKVITVDSGINKMIH
AADKPISGRELEFLQSLFTTFCPEDEKQLFFRGNQPGLLVKEKNDLESKFGRVGLSEKRR
SNLGSEFDKTRLFCGDKSVSGVDDLTKNDLDFLEMLGSIERFSLPREERDKYKVANMSRD
HKAGNKNGDQVFKSGSSILDGRKDKLKEISKHVDDVFKFGSSKLDAKDFKSKTFGERKKD
VDQLFQFGEQCKIGEKRGRNNQPQLVMEENKGTKDVEQLTEKITAFYSSWRKYKEEKWGK
ADVLVITSPSVAPVEDWSRSFLVWLLDGEFLDTTAVFTDTGIEFLCTKESFFRLRTIGIC
MTKIAKLTVSVQLKKRGEQCVDWLKKTLRQVNTAAKSKPNWCPLVVGCIFGESGEIEVLS
RSRMFEVAYVNNALTDLLEQGNFVKAERFAAQQSTLPKQFQMLSLGTRGSANTANAVSFS
ELAKIRSMDDNSYLSEELLRDAKTPTDGRVDNGGPVEQTKPEENKEDNSSRKLADKMMLL
DIKEGDVETSITEDSAEENPLCMLFNDENSPLLQVKERGEQSGPTAEGGIDYSVQPTGVI
DAASESSLPDDNNGISRKDSVGSDDDWTLVEMECQGKETEVAERVSWGRWFMGKTGKSFG
FKDEVTDEAPSKRTKADP*

Transcript Sequence

Transcript ID

Solyc02g081590.3.1
Transcript Infomation

FACT complex subunit SPT16 (AHRD V3.3 *-* W9RSN6_9ROSA)
Sequence

AGCAAAATTTAGTCTAAAAAAAATCTTCTAACCTATTTCTCCGAAATTTTAGCCTTATTA
TTTGTTAACTTCCAAGTTCCAAGTTGCAGCTTATACAAAGACTCTCTATAATTTGATGAT
GTCAATCTTCACACAATTTCTATAGAAGACCCAAAAACCTATTCGGTCTCCTTCTTCGTC
TTCTTCTTCTCCAACAAAACCATAAAAACCCCATCACCGTGCAATTTTTTCCCAATTCTG
AAACAATCAACAACATGAAGAAAGAGCTTTTCGGGAAAAGGCTTACTGCCTTTTACAATA
GTTTGATTTTCAACAAGAAAGATTCATGGGGGAACTCTGATGCTGTTGTAATCCATTCAC
AGCAACAAGAAAATCCGAATTCTCTGTCATCCCAGTTCTATTTATGGCTTATGGGTGAAA
AACATGATGATACGACAGTAATCTTTACTCCTATTGGGATATTCTTTTTCTGTACACAGA
AAAATTATTCCAAGATTCGATCTTTGAGTTGTTGTGCTACTGTGATGAGTAAACAGCCTG
TTTCTGTTCAATTGAAGGCCAAAAACGATGAGGGTTTTGCGTTCATCGACTCCACGATAC
GTCAAGCCAGGGTAATTCGTAACAGCAAGGGGTTTACTGGTGTTTTTGATGATGATTGTA
ATTGGCCGTTTGTTGTGGGTTATATAGAAGGTGAGTACCCTAAGTCTAAGTTTTTTTGGA
ATTGTATGAATGATTTAGAACCCAAAAAGTATAAAGTAATTACTGTGGATTCTGGTATTA
ATAAGATGATTCATGCTGCTGATAAACCAATTTCTGGACGAGAATTAGAATTTTTGCAAT
CACTATTTACTACTTTCTGTCCTGAAGACGAGAAACAACTGTTTTTCCGGGGAAATCAAC
CTGGTTTGTTGGTGAAGGAAAAGAACGATCTTGAGTCTAAATTTGGACGTGTAGGCTTGA
GTGAAAAGCGGAGGAGCAATTTGGGTTCTGAATTTGACAAAACTAGACTCTTCTGCGGTG
ATAAATCAGTGAGCGGGGTGGATGACCTCACTAAAAATGATTTAGATTTTCTTGAGATGC
TGGGGAGTATTGAACGGTTCTCTTTGCCTAGGGAAGAACGGGATAAGTATAAGGTAGCAA
ACATGTCTCGTGATCACAAGGCAGGAAATAAAAATGGTGATCAGGTATTTAAGTCGGGGT
CAAGTATTTTGGATGGTAGAAAGGACAAGTTAAAGGAAATAAGCAAACATGTTGATGATG
TGTTCAAGTTTGGGTCATCTAAATTGGATGCTAAAGACTTCAAATCAAAGACCTTTGGAG
AAAGAAAGAAAGACGTCGATCAGCTGTTTCAGTTTGGAGAGCAGTGTAAGATTGGAGAGA
AGCGAGGCAGGAACAATCAGCCTCAATTGGTAATGGAGGAGAACAAAGGCACAAAAGATG
TCGAGCAACTTACAGAAAAAATAACAGCCTTCTATTCCAGCTGGAGGAAATACAAAGAAG
AGAAATGGGGAAAAGCCGATGTTTTGGTGATTACTTCTCCATCAGTGGCACCAGTTGAAG
ATTGGTCTCGTAGCTTCTTAGTGTGGTTGCTGGATGGTGAGTTTCTGGATACCACAGCTG
TTTTTACGGACACAGGAATTGAATTTCTTTGCACCAAGGAAAGTTTCTTCAGGCTTCGTA
CAATTGGAATTTGTATGACAAAGATTGCAAAGCTAACTGTTTCTGTCCAACTGAAGAAAC
GAGGAGAACAATGTGTAGATTGGTTAAAAAAGACTTTGAGGCAGGTAAATACTGCGGCGA
AGTCTAAACCTAACTGGTGCCCACTTGTTGTTGGCTGCATTTTCGGGGAGTCTGGGGAGA
TAGAGGTTCTTTCACGTTCCAGAATGTTTGAAGTTGCATATGTAAACAATGCTTTAACCG
ACCTGCTTGAACAGGGGAATTTTGTAAAAGCAGAAAGGTTTGCAGCTCAACAGTCAACTT
TACCTAAGCAATTTCAGATGCTGTCTTTGGGAACACGTGGCAGTGCAAATACTGCAAATG
CTGTATCATTTTCTGAGTTAGCCAAAATTAGGTCGATGGATGATAATTCTTATTTGTCAG
AAGAATTACTCCGTGATGCAAAAACTCCTACTGACGGTAGAGTAGATAATGGAGGACCAG
TTGAGCAAACCAAACCTGAAGAAAACAAGGAGGACAATTCATCAAGAAAACTTGCAGATA
AGATGATGTTGCTTGATATAAAGGAGGGTGATGTGGAAACCTCTATCACAGAGGACAGTG
CAGAAGAAAATCCATTGTGTATGTTATTTAATGATGAAAATAGTCCCTTGCTGCAAGTGA
AGGAGCGTGGAGAGCAATCTGGACCAACTGCAGAAGGAGGAATTGATTACAGTGTCCAGC
CAACTGGTGTTATAGATGCTGCATCAGAAAGTTCTTTACCCGATGATAACAATGGCATCT
CGAGGAAGGACTCTGTTGGTTCTGATGATGATTGGACATTAGTTGAGATGGAGTGTCAAG
GGAAAGAAACAGAAGTAGCCGAGAGAGTCAGCTGGGGAAGGTGGTTCATGGGTAAAACTG
GAAAATCATTTGGTTTTAAAGACGAGGTGACCGATGAAGCACCATCAAAGAGGACCAAGG
CTGATCCATGAATACGTATCCGTTTGATTAGCTGCTAGCCAGCAGTAGGTGGTGCACAAT
AATGCTCTTTATTTTCTAGGTTAATAATTTCTGTTGCTTGTCTTAGAACTTGATAGCTCA
TCTTTAAATATGGTTCCGTCGTGTTGACTATATGTGCCTGCCTTCTTTAATCTCATGATG
TTTATATTTTGCTCACAACAACTTCTGATACATTATTGTCCATCTAACATGTGTTTAAAA
GACAATAACTGCCACTGCAAAAAAC