Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g081320.3.1
CDS Infomation

Protein SET DOMAIN GROUP, putative (AHRD V3.3 *** B9T3H1_RICCO)
Sequence

ATGGAAGAAGCTGAAGAATTGAACCTGAAGAGCTTTCTGAAATGGGCAGCGGAGCTGGGA
ATATCAGATTCTCCTTCAACTTGTACAACCCAATCAGATTCATGTTTGGGAAAAACCCTT
TGTGTCGCTAATTTCCCTAAAGCCGGAGGGAGAGGTTTAGCAGCTGTTCGTGATATTAAG
AAAGGGGAATTGATTCTTAGAGTTCCAAAGGGAGCGTTAATGACTAGTCAAAATCTTATG
ATGAACGATGTGGCATTCTCCATTGCTGTCAAGAATCACCCTTCTCTGTCCTCCGCACAG
ATATTGGCTGTTGGATTGTTAAATGAAGTGAACAAGGGTAAGAGTTCTAGGTGGTGGCCC
TATCTAAAACAGTTTCCCCGCAGCTATGAAACACTTGCGGATTTTGGCAAATTCGAGATA
CAAGCATTGCAAATTGATGATGCCATATGGGCTGCACAAAAGGCTTCTAGGAAGGCTGAA
CAGGAGTGGAATGAAGTGACTCAGCTTATGCATGAACTGAAGCTCAAGCCACAATTCCTC
GCTCTTAAGGCATGGCTCTGGGCCTCTGGTTCTATATCCTCGCGGACCATGCATATACCT
TGGGATGAAGCTGGATGTTTATGCCCTGTGGGAGATTTCTTCAATTATGCAGCACCTGAA
GAGGAAACATCTATTTATGAAGATCAAGGTGCTGGAAAGCCTTATTTTATGCAAGAAAAC
AGTACACTTAAATCAGAAACTGAATTGGATTCTACCACTAGGCTAATAGATGCTGGATAT
GAGAAAGACGTTTCTTCATACCATTTCTATGCTAGAAGAAACTACCGGAAAGGAGACCAG
GTTCTTCTAAGCTACGGAACCTACACCAATCTGGAGCTTCTACAACACTATGGATTTCTT
CTGACTGAGAACCCAAATGACAAGGCCTTTATACCTTTAGAACCAGATATGTATTCTCTC
TGCTCATGGGATAATGAGTCACTATACATTCATCCAGATGGGAAGCCATCCTTTGCACTA
CTATCAACATTGCGATTCTGGGCAGTCCCTAAAACCAGTCGCAAATCTGTTGTACACCTT
GTTTATTCAGGGAACAGACTTTCAACAGAGAGTGAAGTTGTTGCAATGAGATGGCTAATT
ATGAAATGCAGAACCACATTGGAAGTTCTTCAAACAACTGCTCCAGAAGATTGTAGGTTG
CTCAACATCCTATATAAGTTTCAAGACATTCATAAATTCCCCGAGGTCAAAGAGATACCA
CCACCCCTTGCTAGTGAGCTTTGTGCTTTTATTGAAAAAAACAAGAATGTGGCCAGTGAA
GGAATTTGCTCCTTGTCAAGTGTAGCTAGAAGGTCCACTGAGAGATGGAAATTAGCTATT
CTGTGGAGGTATCTCTACAAGCAAATACTTTGCAGTTGCATTATACATTGTAGTGCTGTA
ATTTATTATTTAGGGGTCGATCGGTAGGAAGCATTAGGAGAAGTAATTCATATATTATTT
AGTACTATATTTGAAAGGAATTTTGGACCCAAGTAAAATTAATTCATGGATTAGTTATAC
ATCCTTCATGGTTTCGTAGGATGCATTACTAAT

Peptide Sequence

PEP ID

Solyc02g081320.3.1
PEP Infomation

Protein SET DOMAIN GROUP, putative (AHRD V3.3 *** B9T3H1_RICCO)
Sequence

MEEAEELNLKSFLKWAAELGISDSPSTCTTQSDSCLGKTLCVANFPKAGGRGLAAVRDIK
KGELILRVPKGALMTSQNLMMNDVAFSIAVKNHPSLSSAQILAVGLLNEVNKGKSSRWWP
YLKQFPRSYETLADFGKFEIQALQIDDAIWAAQKASRKAEQEWNEVTQLMHELKLKPQFL
ALKAWLWASGSISSRTMHIPWDEAGCLCPVGDFFNYAAPEEETSIYEDQGAGKPYFMQEN
STLKSETELDSTTRLIDAGYEKDVSSYHFYARRNYRKGDQVLLSYGTYTNLELLQHYGFL
LTENPNDKAFIPLEPDMYSLCSWDNESLYIHPDGKPSFALLSTLRFWAVPKTSRKSVVHL
VYSGNRLSTESEVVAMRWLIMKCRTTLEVLQTTAPEDCRLLNILYKFQDIHKFPEVKEIP
PPLASELCAFIEKNKNVASEGICSLSSVARRSTERWKLAILWRYLYKQILCSCIIHCSAV
IYYLGVDR*EALGEVIHILFSTIFERNFGPK*N*FMD*LYILHGFVGCITN

Transcript Sequence

Transcript ID

Solyc02g081320.3.1
Transcript Infomation

Protein SET DOMAIN GROUP, putative (AHRD V3.3 *** B9T3H1_RICCO)
Sequence

TTAGCGATTGTAATTATTTTTGATTGGCTAAATATGTAACTTGCCAAATCATATTTAGGC
CATTAGCTTTTGGACTTGGGCTCACTTAAGCTGAATTGGCCCAGTAAATGAAACAGTAAT
CCAATTGGGCCATCAGAATTTTCTCTAACAAAAGAAACGGGAAAAAAACCCAGTTCCACC
GGAAAGCCGCCATGGAAGAAGCTGAAGAATTGAACCTGAAGAGCTTTCTGAAATGGGCAG
CGGAGCTGGGAATATCAGATTCTCCTTCAACTTGTACAACCCAATCAGATTCATGTTTGG
GAAAAACCCTTTGTGTCGCTAATTTCCCTAAAGCCGGAGGGAGAGGTTTAGCAGCTGTTC
GTGATATTAAGAAAGGGGAATTGATTCTTAGAGTTCCAAAGGGAGCGTTAATGACTAGTC
AAAATCTTATGATGAACGATGTGGCATTCTCCATTGCTGTCAAGAATCACCCTTCTCTGT
CCTCCGCACAGATATTGGCTGTTGGATTGTTAAATGAAGTGAACAAGGGTAAGAGTTCTA
GGTGGTGGCCCTATCTAAAACAGTTTCCCCGCAGCTATGAAACACTTGCGGATTTTGGCA
AATTCGAGATACAAGCATTGCAAATTGATGATGCCATATGGGCTGCACAAAAGGCTTCTA
GGAAGGCTGAACAGGAGTGGAATGAAGTGACTCAGCTTATGCATGAACTGAAGCTCAAGC
CACAATTCCTCGCTCTTAAGGCATGGCTCTGGGCCTCTGGTTCTATATCCTCGCGGACCA
TGCATATACCTTGGGATGAAGCTGGATGTTTATGCCCTGTGGGAGATTTCTTCAATTATG
CAGCACCTGAAGAGGAAACATCTATTTATGAAGATCAAGGTGCTGGAAAGCCTTATTTTA
TGCAAGAAAACAGTACACTTAAATCAGAAACTGAATTGGATTCTACCACTAGGCTAATAG
ATGCTGGATATGAGAAAGACGTTTCTTCATACCATTTCTATGCTAGAAGAAACTACCGGA
AAGGAGACCAGGTTCTTCTAAGCTACGGAACCTACACCAATCTGGAGCTTCTACAACACT
ATGGATTTCTTCTGACTGAGAACCCAAATGACAAGGCCTTTATACCTTTAGAACCAGATA
TGTATTCTCTCTGCTCATGGGATAATGAGTCACTATACATTCATCCAGATGGGAAGCCAT
CCTTTGCACTACTATCAACATTGCGATTCTGGGCAGTCCCTAAAACCAGTCGCAAATCTG
TTGTACACCTTGTTTATTCAGGGAACAGACTTTCAACAGAGAGTGAAGTTGTTGCAATGA
GATGGCTAATTATGAAATGCAGAACCACATTGGAAGTTCTTCAAACAACTGCTCCAGAAG
ATTGTAGGTTGCTCAACATCCTATATAAGTTTCAAGACATTCATAAATTCCCCGAGGTCA
AAGAGATACCACCACCCCTTGCTAGTGAGCTTTGTGCTTTTATTGAAAAAAACAAGAATG
TGGCCAGTGAAGGAATTTGCTCCTTGTCAAGTGTAGCTAGAAGGTCCACTGAGAGATGGA
AATTAGCTATTCTGTGGAGGTATCTCTACAAGCAAATACTTTGCAGTTGCATTATACATT
GTAGTGCTGTAATTTATTATTTAGGGGTCGATCGGTAGGAAGCATTAGGAGAAGTAATTC
ATATATTATTTAGTACTATATTTGAAAGGAATTTTGGACCCAAGTAAAATTAATTCATGG
ATTAGTTATACATCCTTCATGGTTTCGTAGGATGCATTACTAAT