Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g080800.3.1
CDS Infomation

deoxyhypusine synthase
Sequence

ATGGGAGAAGCTCTGAAGTACAGTATCATGGACTCAGTAAGATCGGTAGTTTTCAAAGAA
TCCGAAAATCTAGAAGGTTCTTGCACTAAAATCGAGGGCTACGACTTCAATAAAGGCGTT
AACTATGCTGAGCTGATCAAGTCCATGGTTTCCACTGGTTTCCAAGCATCTAATCTTGGT
GACGCCATTGCAATTGTTAATCAAATGCTAGATTGGAGGCTTTCACATGAGCTGCCCACG
GAGGATTGCAGTGAAGAAGAAAGAGATGTTGCATACAGAGAGTCGGTAACCTGCAAAATC
TTCTTGGGGTTCACTTCAAACCTTGTTTCTTCTGGTGTTAGAGACACTGTCCGCTACCTT
GTTCAGCACCGGATGGTTGATGTTGTGGTTACTACAGCTGGTGGTATTGAAGAGGATCTC
ATAAAGTGCCTCGCACCAACCTACAAGGGGGACTTCTCTTTACCTGGAGCTTCTCTACGA
TCGAAAGGATTGAACCGTATTGGTAACTTATTGGTTCCTAATGACAACTACTGCAAATTT
GAGAATTGGATCATCCCAGTTTTTGACCAAATGTATGAGGAGCAGATTAATGAGAAGGTT
CTATGGACACCATCTAAAGTCATTGCTCGTCTGGGTAAAGAAATTAATGATGAAACCTCA
TACTTGTATTGGGCTTACAAGAACCGGATTCCTGTCTTCTGTCCTGGCTTGACGGATGGA
TCACTTGGTGACATGCTATACTTCCATTCTTTCAAAAAGGGTGATCCAGATAATCCAGAT
CTTAATCCTGGTCTAGTCATAGACATTGTAGGAGATTAG

Peptide Sequence

PEP ID

Solyc02g080800.3.1
PEP Infomation

deoxyhypusine synthase
Sequence

MGEALKYSIMDSVRSVVFKESENLEGSCTKIEGYDFNKGVNYAELIKSMVSTGFQASNLG
DAIAIVNQMLDWRLSHELPTEDCSEEERDVAYRESVTCKIFLGFTSNLVSSGVRDTVRYL
VQHRMVDVVVTTAGGIEEDLIKCLAPTYKGDFSLPGASLRSKGLNRIGNLLVPNDNYCKF
ENWIIPVFDQMYEEQINEKVLWTPSKVIARLGKEINDETSYLYWAYKNRIPVFCPGLTDG
SLGDMLYFHSFKKGDPDNPDLNPGLVIDIVGD*

Transcript Sequence

Transcript ID

Solyc02g080800.3.1
Transcript Infomation

deoxyhypusine synthase
Sequence

CCTAAAATGAACAGAAACCCATTAGTTACATAAACTGCGTTTTGAAAACGCAGAAACTCG
CGGCGGCAGTCTTGTTCCGTACATAATCTTGGTCTGCAATAATGGGAGAAGCTCTGAAGT
ACAGTATCATGGACTCAGTAAGATCGGTAGTTTTCAAAGAATCCGAAAATCTAGAAGGTT
CTTGCACTAAAATCGAGGGCTACGACTTCAATAAAGGCGTTAACTATGCTGAGCTGATCA
AGTCCATGGTTTCCACTGGTTTCCAAGCATCTAATCTTGGTGACGCCATTGCAATTGTTA
ATCAAATGCTAGATTGGAGGCTTTCACATGAGCTGCCCACGGAGGATTGCAGTGAAGAAG
AAAGAGATGTTGCATACAGAGAGTCGGTAACCTGCAAAATCTTCTTGGGGTTCACTTCAA
ACCTTGTTTCTTCTGGTGTTAGAGACACTGTCCGCTACCTTGTTCAGCACCGGATGGTTG
ATGTTGTGGTTACTACAGCTGGTGGTATTGAAGAGGATCTCATAAAGTGCCTCGCACCAA
CCTACAAGGGGGACTTCTCTTTACCTGGAGCTTCTCTACGATCGAAAGGATTGAACCGTA
TTGGTAACTTATTGGTTCCTAATGACAACTACTGCAAATTTGAGAATTGGATCATCCCAG
TTTTTGACCAAATGTATGAGGAGCAGATTAATGAGAAGGTTCTATGGACACCATCTAAAG
TCATTGCTCGTCTGGGTAAAGAAATTAATGATGAAACCTCATACTTGTATTGGGCTTACA
AGAACCGGATTCCTGTCTTCTGTCCTGGCTTGACGGATGGATCACTTGGTGACATGCTAT
ACTTCCATTCTTTCAAAAAGGGTGATCCAGATAATCCAGATCTTAATCCTGGTCTAGTCA
TAGACATTGTAGGAGATTAG