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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g080540.1.1
CDS Infomation

ATP synthase gamma-subunit (AHRD V3.3 *** I0ZA63_COCSC)
Sequence

ATGTCTTGTTCAAATTTGACAATGTTGGTGTCCTCAAAACCATCTCTTTCTGAATCCTCT
GCCCTTTCTTTCCGCTCTGCTGTCAGCTCTTTTCAGCTTCCTAACCACAACCTATCAGGC
CCTTCAAACCCCTCAAGATCATCATCAGTTATCCCTGTCCGATGTGGTCTCCGTGATCTG
CGTGATCGAATTGACTCTGTCAAGAACACACAGAAGATTACTGAGGCTATGAAGCTTGTG
GCTGCTGCTAAAGTCAGAAGAGCACAAGAAGCTGTTGTGGGTGCGAGGCCTTTCTCTGAG
ACTTTGGTTGAGGTACTTTACAACATCAATGAGCAGCTCCAGACAGATGACATTGATGTA
CCACTCACCAAAGTAAGACCTGTCAAGAAAGTGGCGTTGGTGGTTGTCACCGGTGACCGG
GGTCTTTGTGGTGGTTTTAACAACTATATCATCAAAAAAGCTGAGGCCAGGATTAGAGAT
TTGAAAGCTCTTGGCCTTGATTACACTATTATCAGTGTTGGCAAAAAGGGTAATTCTTAT
TTCCTCCGCAGGCCTTACATCCCTGTAGATAAATTTCTTGAAGGAAGCAATCTGCCCACT
GCTAAAGATGCTCAGGCCATTGCTGATGATGTTTTCTCATTTTTCGTGAGTGAAGAGGTT
GACAAGGTTGAGCTTCTCTACACAAAGTTTGTGTCTTTAGTGAAATCTGAGCCAGTCATT
CACACCCTGCTTCCATTGTCACCAAAGGGAGAGATTTGTGACATCAACGGGAACTGTGTT
GATGCAGCTGAAGATGAGTTCTTTAGGTTGACAACAAAGGAAGGGAAATTGACAGTGGAA
AGAGATGTCATGAGGACTAAGACAACTGATTTTTCAGCAATCTTGCAATTCGAGCAGGAC
CCTGTTCAGATTCTTGATGCCTTGCTGCCACTTTACTTGAACAGTCAAATCCTGAGGGCA
TTGCAGGAGTCATTAGCCAGTGAGCTTGCTTCTAGGATGAGTGCCATGAGCAGTGCAACA
GATAATGCATCTGAATTGAAGAAGAATCTATCTAGAGTGTACAACAGACAGCGTCAGGCA
AAGATTACCGGAGAAATATTGGAGATTGTTGCTGGAGCAGATGCCTTGGTTTAA

Peptide Sequence

PEP ID

Solyc02g080540.1.1
PEP Infomation

ATP synthase gamma-subunit (AHRD V3.3 *** I0ZA63_COCSC)
Sequence

MSCSNLTMLVSSKPSLSESSALSFRSAVSSFQLPNHNLSGPSNPSRSSSVIPVRCGLRDL
RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV
PLTKVRPVKKVALVVVTGDRGLCGGFNNYIIKKAEARIRDLKALGLDYTIISVGKKGNSY
FLRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSFFVSEEVDKVELLYTKFVSLVKSEPVI
HTLLPLSPKGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDVMRTKTTDFSAILQFEQD
PVQILDALLPLYLNSQILRALQESLASELASRMSAMSSATDNASELKKNLSRVYNRQRQA
KITGEILEIVAGADALV*

Transcript Sequence

Transcript ID

Solyc02g080540.1.1
Transcript Infomation

ATP synthase gamma-subunit (AHRD V3.3 *** I0ZA63_COCSC)
Sequence

ATGTCTTGTTCAAATTTGACAATGTTGGTGTCCTCAAAACCATCTCTTTCTGAATCCTCT
GCCCTTTCTTTCCGCTCTGCTGTCAGCTCTTTTCAGCTTCCTAACCACAACCTATCAGGC
CCTTCAAACCCCTCAAGATCATCATCAGTTATCCCTGTCCGATGTGGTCTCCGTGATCTG
CGTGATCGAATTGACTCTGTCAAGAACACACAGAAGATTACTGAGGCTATGAAGCTTGTG
GCTGCTGCTAAAGTCAGAAGAGCACAAGAAGCTGTTGTGGGTGCGAGGCCTTTCTCTGAG
ACTTTGGTTGAGGTACTTTACAACATCAATGAGCAGCTCCAGACAGATGACATTGATGTA
CCACTCACCAAAGTAAGACCTGTCAAGAAAGTGGCGTTGGTGGTTGTCACCGGTGACCGG
GGTCTTTGTGGTGGTTTTAACAACTATATCATCAAAAAAGCTGAGGCCAGGATTAGAGAT
TTGAAAGCTCTTGGCCTTGATTACACTATTATCAGTGTTGGCAAAAAGGGTAATTCTTAT
TTCCTCCGCAGGCCTTACATCCCTGTAGATAAATTTCTTGAAGGAAGCAATCTGCCCACT
GCTAAAGATGCTCAGGCCATTGCTGATGATGTTTTCTCATTTTTCGTGAGTGAAGAGGTT
GACAAGGTTGAGCTTCTCTACACAAAGTTTGTGTCTTTAGTGAAATCTGAGCCAGTCATT
CACACCCTGCTTCCATTGTCACCAAAGGGAGAGATTTGTGACATCAACGGGAACTGTGTT
GATGCAGCTGAAGATGAGTTCTTTAGGTTGACAACAAAGGAAGGGAAATTGACAGTGGAA
AGAGATGTCATGAGGACTAAGACAACTGATTTTTCAGCAATCTTGCAATTCGAGCAGGAC
CCTGTTCAGATTCTTGATGCCTTGCTGCCACTTTACTTGAACAGTCAAATCCTGAGGGCA
TTGCAGGAGTCATTAGCCAGTGAGCTTGCTTCTAGGATGAGTGCCATGAGCAGTGCAACA
GATAATGCATCTGAATTGAAGAAGAATCTATCTAGAGTGTACAACAGACAGCGTCAGGCA
AAGATTACCGGAGAAATATTGGAGATTGTTGCTGGAGCAGATGCCTTGGTTTAA