Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g080170.1.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)
Sequence	ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAAAAGCAAGCACT GTAACAACAACACAAAAGTCCCAAGACTGGAGAACCCAATTCAAACAAACCCAATTAGTT TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTTACTTCTCAAG AACCTCAAACTTTGTTCTTCACAGTTTACTCCATCTCTCTTCCTACAAATCCTCCACAAC ACCCAAGACAACCCACAAGTCTCTCTACGCTTCTTCCACTATGCCAAGAACAATCTTGGG TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA TCCAGACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT GTAGGTTTCTTGATTCAGTCATTGAAAGCTGGTGAAATTCACATTCAGTCTTCAGTCTTG AGCTCAGTTCTTGAATGTTATTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT CAAATAGTTAGAGAATATGGCTATTTTGTGTCTGTTAATTGTTGTAATACATTGCTTAAT TTACTGCTCAGTAAGAATGATTTAAGACTGGGTTGGTGTTATTATGGTTCTATTATTCGT AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAGATGCTTTGTAAAGAT GGGAAATTTGAGAAAATTGTTGCTATTCTAGACAAGGGGGTATGTAGTCCTCTTATTTAC AACATACTCATAGACTGTTACTCTGAGAGAGGGAAGTTTGATGCTGCGTTTGGTTATTTA AATGATATGTATAGTGAACGCATTGATCCAACCTTTAGTACTTTTAGCTCAATTCTTGAT GGTGCTTGCAAATATCAAAATGCCCAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA AAAGGACATCTCCCGAAAGTTGTGACACCTGACTATGATTCTGTGATTCAAAAGTTCTCT GGTATTGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGCATT AAGCTACAAGACAAAACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT GAAGATGCTATTTGGATGTACAACATTATAGTCGAGAGAAAAATATTCATCAATGGCAAA TGCTATAGTGCCTTTATGAGTGTCCTATGCAATGAAATTCCATCAGTGGAAGTTAGCAGT TTGTTGAAAGACTTGATAGGAAGAGGATTTGTACCTCCCGTATCTCAAGTATCTAAATTT ATAGTTTCTCAATGTGAAAAGCATCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT TTTCAAAAAGGACTTCAGTTTGAATCTTTTTGTTGCTGCTCTTTGGTGCGGCACTATTGC TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT GCTTTAGATGTAGAGACCTATGGTTTACTACTTGACAGACTGTTTAAATCAAGACGGCAT GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGGAAGT TTTTCAATCATGATCAGAGGGCTATGTCAGGAAGAGGAGTTTAGAAAAGCAATGAGACTG CATGATGATATGTTGAAATTGGGGTTTAAACCTGACAAAAAAGCGTATAAACGTTTGATT TCTGGGTTTGGCTAA

Peptide Sequence

PEP ID	Solyc02g080170.1.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)
Sequence	MTIASRALFLFQKSIAKASTVTTTQKSQDWRTQFKQTQLVSQISSILLQRQTNQWPLLLK NLKLCSSQFTPSLFLQILHNTQDNPQVSLRFFHYAKNNLGFQPDAKVLCTLVYILLGSGL SRPAKPILDTLIQTYPPAQIVGFLIQSLKAGEIHIQSSVLSSVLECYCNKGLFLEALQVY QIVREYGYFVSVNCCNTLLNLLLSKNDLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKD GKFEKIVAILDKGVCSPLIYNILIDCYSERGKFDAAFGYLNDMYSERIDPTFSTFSSILD GACKYQNAQVIESVMSSMVEKGHLPKVVTPDYDSVIQKFSGIGKAYAAELFFREAYEKSI KLQDKTYGSMLRAFSKEGKAEDAIWMYNIIVERKIFINGKCYSAFMSVLCNEIPSVEVSS LLKDLIGRGFVPPVSQVSKFIVSQCEKHQWKEAEELLNVIFQKGLQFESFCCCSLVRHYC FSRRIDSAISLHTELERLGVALDVETYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGS FSIMIRGLCQEEEFRKAMRLHDDMLKLGFKPDKKAYKRLISGFG*

Transcript Sequence

Transcript ID	Solyc02g080170.1.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)
Sequence	ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAAAAGCAAGCACT GTAACAACAACACAAAAGTCCCAAGACTGGAGAACCCAATTCAAACAAACCCAATTAGTT TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTTACTTCTCAAG AACCTCAAACTTTGTTCTTCACAGTTTACTCCATCTCTCTTCCTACAAATCCTCCACAAC ACCCAAGACAACCCACAAGTCTCTCTACGCTTCTTCCACTATGCCAAGAACAATCTTGGG TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA TCCAGACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT GTAGGTTTCTTGATTCAGTCATTGAAAGCTGGTGAAATTCACATTCAGTCTTCAGTCTTG AGCTCAGTTCTTGAATGTTATTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT CAAATAGTTAGAGAATATGGCTATTTTGTGTCTGTTAATTGTTGTAATACATTGCTTAAT TTACTGCTCAGTAAGAATGATTTAAGACTGGGTTGGTGTTATTATGGTTCTATTATTCGT AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAGATGCTTTGTAAAGAT GGGAAATTTGAGAAAATTGTTGCTATTCTAGACAAGGGGGTATGTAGTCCTCTTATTTAC AACATACTCATAGACTGTTACTCTGAGAGAGGGAAGTTTGATGCTGCGTTTGGTTATTTA AATGATATGTATAGTGAACGCATTGATCCAACCTTTAGTACTTTTAGCTCAATTCTTGAT GGTGCTTGCAAATATCAAAATGCCCAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA AAAGGACATCTCCCGAAAGTTGTGACACCTGACTATGATTCTGTGATTCAAAAGTTCTCT GGTATTGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGCATT AAGCTACAAGACAAAACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT GAAGATGCTATTTGGATGTACAACATTATAGTCGAGAGAAAAATATTCATCAATGGCAAA TGCTATAGTGCCTTTATGAGTGTCCTATGCAATGAAATTCCATCAGTGGAAGTTAGCAGT TTGTTGAAAGACTTGATAGGAAGAGGATTTGTACCTCCCGTATCTCAAGTATCTAAATTT ATAGTTTCTCAATGTGAAAAGCATCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT TTTCAAAAAGGACTTCAGTTTGAATCTTTTTGTTGCTGCTCTTTGGTGCGGCACTATTGC TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT GCTTTAGATGTAGAGACCTATGGTTTACTACTTGACAGACTGTTTAAATCAAGACGGCAT GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGGAAGT TTTTCAATCATGATCAGAGGGCTATGTCAGGAAGAGGAGTTTAGAAAAGCAATGAGACTG CATGATGATATGTTGAAATTGGGGTTTAAACCTGACAAAAAAGCGTATAAACGTTTGATT TCTGGGTTTGGCTAA