Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g080170.1.1

CDS Infomation

Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)

Sequence

ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAAAAGCAAGCACT
GTAACAACAACACAAAAGTCCCAAGACTGGAGAACCCAATTCAAACAAACCCAATTAGTT
TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTTACTTCTCAAG
AACCTCAAACTTTGTTCTTCACAGTTTACTCCATCTCTCTTCCTACAAATCCTCCACAAC
ACCCAAGACAACCCACAAGTCTCTCTACGCTTCTTCCACTATGCCAAGAACAATCTTGGG
TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA
TCCAGACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT
GTAGGTTTCTTGATTCAGTCATTGAAAGCTGGTGAAATTCACATTCAGTCTTCAGTCTTG
AGCTCAGTTCTTGAATGTTATTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT
CAAATAGTTAGAGAATATGGCTATTTTGTGTCTGTTAATTGTTGTAATACATTGCTTAAT
TTACTGCTCAGTAAGAATGATTTAAGACTGGGTTGGTGTTATTATGGTTCTATTATTCGT
AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAGATGCTTTGTAAAGAT
GGGAAATTTGAGAAAATTGTTGCTATTCTAGACAAGGGGGTATGTAGTCCTCTTATTTAC
AACATACTCATAGACTGTTACTCTGAGAGAGGGAAGTTTGATGCTGCGTTTGGTTATTTA
AATGATATGTATAGTGAACGCATTGATCCAACCTTTAGTACTTTTAGCTCAATTCTTGAT
GGTGCTTGCAAATATCAAAATGCCCAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA
AAAGGACATCTCCCGAAAGTTGTGACACCTGACTATGATTCTGTGATTCAAAAGTTCTCT
GGTATTGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGCATT
AAGCTACAAGACAAAACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT
GAAGATGCTATTTGGATGTACAACATTATAGTCGAGAGAAAAATATTCATCAATGGCAAA
TGCTATAGTGCCTTTATGAGTGTCCTATGCAATGAAATTCCATCAGTGGAAGTTAGCAGT
TTGTTGAAAGACTTGATAGGAAGAGGATTTGTACCTCCCGTATCTCAAGTATCTAAATTT
ATAGTTTCTCAATGTGAAAAGCATCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT
TTTCAAAAAGGACTTCAGTTTGAATCTTTTTGTTGCTGCTCTTTGGTGCGGCACTATTGC
TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT
GCTTTAGATGTAGAGACCTATGGTTTACTACTTGACAGACTGTTTAAATCAAGACGGCAT
GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGGAAGT
TTTTCAATCATGATCAGAGGGCTATGTCAGGAAGAGGAGTTTAGAAAAGCAATGAGACTG
CATGATGATATGTTGAAATTGGGGTTTAAACCTGACAAAAAAGCGTATAAACGTTTGATT
TCTGGGTTTGGCTAA

Peptide Sequence

PEP ID

Solyc02g080170.1.1

PEP Infomation

Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)

Sequence

MTIASRALFLFQKSIAKASTVTTTQKSQDWRTQFKQTQLVSQISSILLQRQTNQWPLLLK
NLKLCSSQFTPSLFLQILHNTQDNPQVSLRFFHYAKNNLGFQPDAKVLCTLVYILLGSGL
SRPAKPILDTLIQTYPPAQIVGFLIQSLKAGEIHIQSSVLSSVLECYCNKGLFLEALQVY
QIVREYGYFVSVNCCNTLLNLLLSKNDLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKD
GKFEKIVAILDKGVCSPLIYNILIDCYSERGKFDAAFGYLNDMYSERIDPTFSTFSSILD
GACKYQNAQVIESVMSSMVEKGHLPKVVTPDYDSVIQKFSGIGKAYAAELFFREAYEKSI
KLQDKTYGSMLRAFSKEGKAEDAIWMYNIIVERKIFINGKCYSAFMSVLCNEIPSVEVSS
LLKDLIGRGFVPPVSQVSKFIVSQCEKHQWKEAEELLNVIFQKGLQFESFCCCSLVRHYC
FSRRIDSAISLHTELERLGVALDVETYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGS
FSIMIRGLCQEEEFRKAMRLHDDMLKLGFKPDKKAYKRLISGFG*

Transcript Sequence

Transcript ID

Solyc02g080170.1.1

Transcript Infomation

Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H1G1_POPTR)

Sequence

ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAAAAGCAAGCACT
GTAACAACAACACAAAAGTCCCAAGACTGGAGAACCCAATTCAAACAAACCCAATTAGTT
TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTTACTTCTCAAG
AACCTCAAACTTTGTTCTTCACAGTTTACTCCATCTCTCTTCCTACAAATCCTCCACAAC
ACCCAAGACAACCCACAAGTCTCTCTACGCTTCTTCCACTATGCCAAGAACAATCTTGGG
TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA
TCCAGACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT
GTAGGTTTCTTGATTCAGTCATTGAAAGCTGGTGAAATTCACATTCAGTCTTCAGTCTTG
AGCTCAGTTCTTGAATGTTATTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT
CAAATAGTTAGAGAATATGGCTATTTTGTGTCTGTTAATTGTTGTAATACATTGCTTAAT
TTACTGCTCAGTAAGAATGATTTAAGACTGGGTTGGTGTTATTATGGTTCTATTATTCGT
AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAGATGCTTTGTAAAGAT
GGGAAATTTGAGAAAATTGTTGCTATTCTAGACAAGGGGGTATGTAGTCCTCTTATTTAC
AACATACTCATAGACTGTTACTCTGAGAGAGGGAAGTTTGATGCTGCGTTTGGTTATTTA
AATGATATGTATAGTGAACGCATTGATCCAACCTTTAGTACTTTTAGCTCAATTCTTGAT
GGTGCTTGCAAATATCAAAATGCCCAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA
AAAGGACATCTCCCGAAAGTTGTGACACCTGACTATGATTCTGTGATTCAAAAGTTCTCT
GGTATTGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGCATT
AAGCTACAAGACAAAACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT
GAAGATGCTATTTGGATGTACAACATTATAGTCGAGAGAAAAATATTCATCAATGGCAAA
TGCTATAGTGCCTTTATGAGTGTCCTATGCAATGAAATTCCATCAGTGGAAGTTAGCAGT
TTGTTGAAAGACTTGATAGGAAGAGGATTTGTACCTCCCGTATCTCAAGTATCTAAATTT
ATAGTTTCTCAATGTGAAAAGCATCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT
TTTCAAAAAGGACTTCAGTTTGAATCTTTTTGTTGCTGCTCTTTGGTGCGGCACTATTGC
TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT
GCTTTAGATGTAGAGACCTATGGTTTACTACTTGACAGACTGTTTAAATCAAGACGGCAT
GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGGAAGT
TTTTCAATCATGATCAGAGGGCTATGTCAGGAAGAGGAGTTTAGAAAAGCAATGAGACTG
CATGATGATATGTTGAAATTGGGGTTTAAACCTGACAAAAAAGCGTATAAACGTTTGATT
TCTGGGTTTGGCTAA