Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g079830.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061GG29_THECC)
Sequence	ATGGCTTCTTCTTCCGTTTATCGCCGGCTTCACGGACTCTTCACCGGGAAACGCAAAGTC AGTGTAAATCTGAAAACTGAACAGCCCCAAACAACTTCCACCAAACCCACATCCAAACTT TCTGAAAAACATAAACTTCAAAGCATTATTGACAACTTCAAAAAATCATCTGAATCTCCT GAATTCCGAAACCGTTGCGCCAACTATACAGCCGCTATACGCCGCCTTGAATTCAATTCT TCTGCTATCGAAGACATTTTTGAACACCAAAAACAATACCCGGAAATTAGCAATGAGTTC TTTGTCTGCCGTCTCATACTTTTATATGGTACGGTAAAAATGCATGAACATGCCCGTAAA TTGTTCGACGAAATGCCAAACTTAAAATGTCAACGAACAGTCTTTTCTTTCAATGCCCTT TTGGAGGCCTACTCAAGGGCTGAGAAGTACGATATAATCAGCGATTTGTTTCGTGAATTA CCTGAGGAGCTATCCATAGAGCCTGATGTAGTGTCCTATAATACTTTGATTAAGGCATTA TGGAAAGCTGGTTCTTTGGATTCTGCTCCCAGTGTAATGGATGAGATGGAAAAACACGGA ATCATACCTGATTTAGTGACTTTCAATACGCTTTCAAACGCGTATTATAAAAGTAAAAGG TTTTCTGAAGCAGAAGATTTGTGGGTATTGATGCAAAAGAAGAATGTTGATGCTGACTTG GGGAGTTACACCATTAGATTACAAGGATTGGTTGCGAATAACCAGGTTAACGAGGCGATT GAACTGTTTGAGGAGATGGGGAAGAAAGACATCATCCCAAAAGCTTTCAGTTATAACATT ATGATCAAAATGTATGTGGATGATAGGAACTGGGAGGAGGCAGAAAGATGGTATGTGAAA ATGGTGGAAAATGGATGTTATCCGGATTATGCAACATTTGAGAAGCTCATTTCTTTTGCT TGTGACAAGGATAATCTTGATTTTGCGCTTGAATTGTGTAAGAAAGCTATTGCTTCAAAA GTTGCTATTCATAATGCAACAATGCAGAGGGTAGTCAATGTCTTGGCTGAGCATTCCAAG CTTGAAGATGCGCAGGAGCTGGTGAACTTGGCCAAATCATGTAAGCTATACCACTGCCGA CCCCGATCGCGGTATAAACTTTCGCTGCCTTCTTCTTTAATAGTTGCACATTTTATGCTG TAG

Peptide Sequence

PEP ID	Solyc02g079830.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061GG29_THECC)
Sequence	MASSSVYRRLHGLFTGKRKVSVNLKTEQPQTTSTKPTSKLSEKHKLQSIIDNFKKSSESP EFRNRCANYTAAIRRLEFNSSAIEDIFEHQKQYPEISNEFFVCRLILLYGTVKMHEHARK LFDEMPNLKCQRTVFSFNALLEAYSRAEKYDIISDLFRELPEELSIEPDVVSYNTLIKAL WKAGSLDSAPSVMDEMEKHGIIPDLVTFNTLSNAYYKSKRFSEAEDLWVLMQKKNVDADL GSYTIRLQGLVANNQVNEAIELFEEMGKKDIIPKAFSYNIMIKMYVDDRNWEEAERWYVK MVENGCYPDYATFEKLISFACDKDNLDFALELCKKAIASKVAIHNATMQRVVNVLAEHSK LEDAQELVNLAKSCKLYHCRPRSRYKLSLPSSLIVAHFML*

Transcript Sequence

Transcript ID	Solyc02g079830.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061GG29_THECC)
Sequence	ATGGCTTCTTCTTCCGTTTATCGCCGGCTTCACGGACTCTTCACCGGGAAACGCAAAGTC AGTGTAAATCTGAAAACTGAACAGCCCCAAACAACTTCCACCAAACCCACATCCAAACTT TCTGAAAAACATAAACTTCAAAGCATTATTGACAACTTCAAAAAATCATCTGAATCTCCT GAATTCCGAAACCGTTGCGCCAACTATACAGCCGCTATACGCCGCCTTGAATTCAATTCT TCTGCTATCGAAGACATTTTTGAACACCAAAAACAATACCCGGAAATTAGCAATGAGTTC TTTGTCTGCCGTCTCATACTTTTATATGGTACGGTAAAAATGCATGAACATGCCCGTAAA TTGTTCGACGAAATGCCAAACTTAAAATGTCAACGAACAGTCTTTTCTTTCAATGCCCTT TTGGAGGCCTACTCAAGGGCTGAGAAGTACGATATAATCAGCGATTTGTTTCGTGAATTA CCTGAGGAGCTATCCATAGAGCCTGATGTAGTGTCCTATAATACTTTGATTAAGGCATTA TGGAAAGCTGGTTCTTTGGATTCTGCTCCCAGTGTAATGGATGAGATGGAAAAACACGGA ATCATACCTGATTTAGTGACTTTCAATACGCTTTCAAACGCGTATTATAAAAGTAAAAGG TTTTCTGAAGCAGAAGATTTGTGGGTATTGATGCAAAAGAAGAATGTTGATGCTGACTTG GGGAGTTACACCATTAGATTACAAGGATTGGTTGCGAATAACCAGGTTAACGAGGCGATT GAACTGTTTGAGGAGATGGGGAAGAAAGACATCATCCCAAAAGCTTTCAGTTATAACATT ATGATCAAAATGTATGTGGATGATAGGAACTGGGAGGAGGCAGAAAGATGGTATGTGAAA ATGGTGGAAAATGGATGTTATCCGGATTATGCAACATTTGAGAAGCTCATTTCTTTTGCT TGTGACAAGGATAATCTTGATTTTGCGCTTGAATTGTGTAAGAAAGCTATTGCTTCAAAA GTTGCTATTCATAATGCAACAATGCAGAGGGTAGTCAATGTCTTGGCTGAGCATTCCAAG CTTGAAGATGCGCAGGAGCTGGTGAACTTGGCCAAATCATGTAAGCTATACCACTGCCGA CCCCGATCGCGGTATAAACTTTCGCTGCCTTCTTCTTTAATAGTTGCACATTTTATGCTG TAG