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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g079760.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G61660.7)
Sequence

ATGGCTGATGAATATCAAGCAAGTGTTTGTGGAGGAAACTGGTGGAATTCAAGTAGAAGT
ATATTTGGTTCATCACTATGTGCATCTTCAGTTCCTTTAGGAAACTCTAATTTTGCATGG
ACAAACGATCATTTGTTGGATATGAAATCTTCCTGTAGGTCTAACGATGAATCTGGTAAT
TCCGATGAATCTGTCGTTCTTCAAGAATTACCTAAACATGATTCCACCCTACAAATCTTG
GGTAGTGGCCTTAATTCTTCATCAACAAATGATAATTGGAGTCATACCTTGATGCATGGA
AATGATAGGAGTGAAAGTAGTTATCCTTCAATACTACAGCAAGAAGATATAAATTCAAGC
ATGAATTACCAACAAGAAAGTGGTGTTGATTGTTCAAGCAACTCATTTAAGCAAGATTTC
ACTTTAGGAATGAATCATCCAATCACTAGCTCAACTAATACTCATCATGATCAAATTTCT
TCAACCTTTCCAATGAATTCATCTTTCTCTAATTATCCTTCAGCTTTACTTCAAACTTTA
TTTGATAACGATCCTCCTCAACAACAACAATTACAACAATCTTTGTTTGCTACTAATAAC
AACCAACCAATGAATTTCCCAACATCATCCTTAAACTATAGGCCTGATTTGAATGACTTT
TCACCTTCTATGCCTAAATTCCCTAATTCCTTGTTGATACCAAAACAAACTACAACACCT
TCGAATCATTTTCCAAATTACTCTCTTAATGCTACTGCCTCTCTCTACAATACTTCATCA
GCCACATCCTTAAACAATATGCGCGCTACTCTTATGCCTTCTATGCATCCACAAATTCTC
CAGTCACCAACATTTAACGACAATTCCAGAGCTCCTAACGTTACTCCAAAGAGTAAAGTT
GAAGATTTAAGAGAGTCGAGGGTGAGTAAGAAAAGTGTGACTAATGAAGCAACATTGAAG
AGGGCAAGAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAGAAAAGAGAAATTG
GGGGACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACAGCT
TCAGTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCAAGTCAATGCTCTT
AGTACTCCTTATTTGAAAAATGGATCAACCACCACTCAACACCAACAGATTGCTGATAAG
GTGAAGGAAGAAGATTTAAGGAGCCGAGGATTGTGTCTGGTACCGATATCGAGTACTTTT
CCAGTAGCAACTGAAAGTAGTACAGATTTTTGGACTCCAAATTTTGGTGGTACGTTCAGG
TAG

Peptide Sequence

PEP ID

Solyc02g079760.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G61660.7)
Sequence

MADEYQASVCGGNWWNSSRSIFGSSLCASSVPLGNSNFAWTNDHLLDMKSSCRSNDESGN
SDESVVLQELPKHDSTLQILGSGLNSSSTNDNWSHTLMHGNDRSESSYPSILQQEDINSS
MNYQQESGVDCSSNSFKQDFTLGMNHPITSSTNTHHDQISSTFPMNSSFSNYPSALLQTL
FDNDPPQQQQLQQSLFATNNNQPMNFPTSSLNYRPDLNDFSPSMPKFPNSLLIPKQTTTP
SNHFPNYSLNATASLYNTSSATSLNNMRATLMPSMHPQILQSPTFNDNSRAPNVTPKSKV
EDLRESRVSKKSVTNEATLKRARIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTA
SVLHEAIEYIKFLHDQVNALSTPYLKNGSTTTQHQQIADKVKEEDLRSRGLCLVPISSTF
PVATESSTDFWTPNFGGTFR*

Transcript Sequence

Transcript ID

Solyc02g079760.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G61660.7)
Sequence

ATAAGTACAACTCTCAGTTCATAAATTCATTTTCATGTAATACAGAAACACACAAGTACT
ATTACGACTAGTCGAGCTTTATTCAAGGAGCTAGAAGAAGTATATTTTTAATTTATTTAG
GAGTGACTAAGTTATGGCTGATGAATATCAAGCAAGTGTTTGTGGAGGAAACTGGTGGAA
TTCAAGTAGAAGTATATTTGGTTCATCACTATGTGCATCTTCAGTTCCTTTAGGAAACTC
TAATTTTGCATGGACAAACGATCATTTGTTGGATATGAAATCTTCCTGTAGGTCTAACGA
TGAATCTGGTAATTCCGATGAATCTGTCGTTCTTCAAGAATTACCTAAACATGATTCCAC
CCTACAAATCTTGGGTAGTGGCCTTAATTCTTCATCAACAAATGATAATTGGAGTCATAC
CTTGATGCATGGAAATGATAGGAGTGAAAGTAGTTATCCTTCAATACTACAGCAAGAAGA
TATAAATTCAAGCATGAATTACCAACAAGAAAGTGGTGTTGATTGTTCAAGCAACTCATT
TAAGCAAGATTTCACTTTAGGAATGAATCATCCAATCACTAGCTCAACTAATACTCATCA
TGATCAAATTTCTTCAACCTTTCCAATGAATTCATCTTTCTCTAATTATCCTTCAGCTTT
ACTTCAAACTTTATTTGATAACGATCCTCCTCAACAACAACAATTACAACAATCTTTGTT
TGCTACTAATAACAACCAACCAATGAATTTCCCAACATCATCCTTAAACTATAGGCCTGA
TTTGAATGACTTTTCACCTTCTATGCCTAAATTCCCTAATTCCTTGTTGATACCAAAACA
AACTACAACACCTTCGAATCATTTTCCAAATTACTCTCTTAATGCTACTGCCTCTCTCTA
CAATACTTCATCAGCCACATCCTTAAACAATATGCGCGCTACTCTTATGCCTTCTATGCA
TCCACAAATTCTCCAGTCACCAACATTTAACGACAATTCCAGAGCTCCTAACGTTACTCC
AAAGAGTAAAGTTGAAGATTTAAGAGAGTCGAGGGTGAGTAAGAAAAGTGTGACTAATGA
AGCAACATTGAAGAGGGCAAGAATAGAGACACCATCACCATTGCCAACTTTTAAGGTCAG
AAAAGAGAAATTGGGGGACCGTATTACTGCTCTCCAGCAATTGGTTTCACCTTTCGGAAA
GACTGATACAGCTTCAGTTCTCCATGAAGCTATTGAGTACATCAAGTTCCTCCATGATCA
AGTCAATGCTCTTAGTACTCCTTATTTGAAAAATGGATCAACCACCACTCAACACCAACA
GATTGCTGATAAGGTGAAGGAAGAAGATTTAAGGAGCCGAGGATTGTGTCTGGTACCGAT
ATCGAGTACTTTTCCAGTAGCAACTGAAAGTAGTACAGATTTTTGGACTCCAAATTTTGG
TGGTACGTTCAGGTAGAGAGGCAGTGATTTTAATTTTAGGTAAGAAAAGGGAAAGTGAGT
ATTGACAGCCAATGCTGGGCCATATCTACAGCCAGAATGATGTGTTGGTAGGCTAAGTAC
ATGATGATTATAGAGAAGATTAAGTGTAGAGCTGTAATCACCTTAATTAATTACTAGTAA
TAATTTGCAAGGATTAGGAACAGGAACAAGTGCTAAATTTAGCTAAGACTACTTTATTTT
AACATTTGTGTTTATGTTTTATGTAACTTGTTGTTTTGTTGCTCTTGGTTGGGCTGAATT
TAGCACATCATATATAAGGAACTTTTTGTTCCTGTTT