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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g079510.3.1
CDS Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

ATGGGTTTTCGTTTGAGCCTTTTGAGCCTTGCGGTGAGCCTTGTGGCACTTGCACTCGCA
GGTGTTGCCATTTATAGAAATACTTATGAGGCCATGATCATGAATAACGGATCACTCCTC
CAAAATATCTCTCCAGATATCGATTCGTTGGAATCAGGCGAAGTCAGTATTTTAATTTTA
AATGATAAGAAGAAAAATTCAGACAAATATTTGAGTCAGCAATTAACTCAGGAGTCTTGC
GTTTTCTCAGCTGTGAAAGGAGTTGTGGACAGTGCCATTGATAATGAAACGCGCATGGGA
GCTTCTCTCATTCGTCTACATTTCCATGACTGCTTTGTTGATGGTTGTGATGGAGGTATT
CTGCTAGATGATATTAATGGAACATTCACCGGGGAACAAAACTCACCACCCAACAACAAC
TCAGTCAGAGGCTTTGAAGTGATAGCACAAGCTAAACAAAGTGTTGTAGATTCATGCCCC
AACATATCTGTATCTTGTGCTGATATTTTAGCTATTGCTGCTCGTGATTCCCTTGCTAAA
TTAGGAGGACAAACTTATACCGTTGCACTAGGGAGAAGCGATGCTACAACAGCCAACTTT
AGTGGTGCTATAAATCAACTTCCAGCTCCATCCGACAACCTAACTGTTCAAATACAGAAA
TTCAGCGACAAAAATTTCACTGTCCGTGAAATGGTGGCACTAGCTGGCGCGCACACGGTA
GGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACGTTAATCCTGCCGCACAACTC
CAATGCAACTGCTCCGCCACGCTAACTGATTCCGATTTGCAACAATTGGATACAACTCCT
GCTGTGTTCGACAAAGTTTACTATGATAACTTAAACAACAACCAAGGGATAATGTTCTCG
GATCAAGTTTTGACTGGGAATACTACAACTGCTGGTTTTGTAACCACTTATAGCAACAAT
GTTACTGTTTTTCTTGAAGATTTTGCTGCTGCTATGATCAAAATGGGGAATTTACCTCCC
TCCGCTGGCGCTCAATTGGAAATTCGCGATGTTTGCAGCAGGGTTAATCCCACTTCTGTG
GCTTCTATGTGA

Peptide Sequence

PEP ID

Solyc02g079510.3.1
PEP Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

MGFRLSLLSLAVSLVALALAGVAIYRNTYEAMIMNNGSLLQNISPDIDSLESGEVSILIL
NDKKKNSDKYLSQQLTQESCVFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGI
LLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAK
LGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTV
GFARCSTVCTSGNVNPAAQLQCNCSATLTDSDLQQLDTTPAVFDKVYYDNLNNNQGIMFS
DQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVNPTSV
ASM*

Transcript Sequence

Transcript ID

Solyc02g079510.3.1
Transcript Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

GAAGTGAAAATATAGGCAAACAGACCATCCCTAAGGCCTCTGTTTCTTCCAAATAGACAT
TTAATAATTTCTTTAAGTGATGGGTTTTCGTTTGAGCCTTTTGAGCCTTGCGGTGAGCCT
TGTGGCACTTGCACTCGCAGGTGTTGCCATTTATAGAAATACTTATGAGGCCATGATCAT
GAATAACGGATCACTCCTCCAAAATATCTCTCCAGATATCGATTCGTTGGAATCAGGCGA
AGTCAGTATTTTAATTTTAAATGATAAGAAGAAAAATTCAGACAAATATTTGAGTCAGCA
ATTAACTCAGGAGTCTTGCGTTTTCTCAGCTGTGAAAGGAGTTGTGGACAGTGCCATTGA
TAATGAAACGCGCATGGGAGCTTCTCTCATTCGTCTACATTTCCATGACTGCTTTGTTGA
TGGTTGTGATGGAGGTATTCTGCTAGATGATATTAATGGAACATTCACCGGGGAACAAAA
CTCACCACCCAACAACAACTCAGTCAGAGGCTTTGAAGTGATAGCACAAGCTAAACAAAG
TGTTGTAGATTCATGCCCCAACATATCTGTATCTTGTGCTGATATTTTAGCTATTGCTGC
TCGTGATTCCCTTGCTAAATTAGGAGGACAAACTTATACCGTTGCACTAGGGAGAAGCGA
TGCTACAACAGCCAACTTTAGTGGTGCTATAAATCAACTTCCAGCTCCATCCGACAACCT
AACTGTTCAAATACAGAAATTCAGCGACAAAAATTTCACTGTCCGTGAAATGGTGGCACT
AGCTGGCGCGCACACGGTAGGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACGT
TAATCCTGCCGCACAACTCCAATGCAACTGCTCCGCCACGCTAACTGATTCCGATTTGCA
ACAATTGGATACAACTCCTGCTGTGTTCGACAAAGTTTACTATGATAACTTAAACAACAA
CCAAGGGATAATGTTCTCGGATCAAGTTTTGACTGGGAATACTACAACTGCTGGTTTTGT
AACCACTTATAGCAACAATGTTACTGTTTTTCTTGAAGATTTTGCTGCTGCTATGATCAA
AATGGGGAATTTACCTCCCTCCGCTGGCGCTCAATTGGAAATTCGCGATGTTTGCAGCAG
GGTTAATCCCACTTCTGTGGCTTCTATGTGAAAAATTTCGGAAATTTTAAGTAGCTTTTA
TCTTACTATTTGTCGCATCATGTTTTCATCTTTTTCAGTATTGATGCAATAATATATATG
TCCCTATGTTCGCAGTGTTTTTAATCCAATTTATTCTTCTTAATCCATATAGT