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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g079500.4.1
CDS Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

ATGGGTTTTCGTTTGAGTCATTTGAGTCTTGCATTGAGTTTTGTGGCACTTGCACTTGCA
GGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAAAAACGGTTCACTCCTC
AAAAATGTTTCTCCAGATTTCGATTCGTTGGAATCAGGCGTAGCCAGTATTTTAACCTTA
AATAATAATAAGAAGAGAAATTCAGACAAGTACTTGAGACAGCAACTAACTCCGGAGGCA
TGCGTTTTCTCAGCTGTACGAGCAGTTGTGGACAGTGCTATTGATGCAGAAACTCGCATG
GGAGCTTCTCTCATTCGTCTCCACTTTCATGACTGCTTCGTTGATGGTTGTGATGGAGGT
ATTCTGCTAGATGATATTAATGGAACATTTACAGGGGAACAAAACTCACCACCCAACGCC
AACTCAGCCAGAGGTTATGAAGTAATAGCACAAGCTAAACAAAGTGTCATAAACACATGC
CCCAACGTATCTGTATCTTGTGCCGACATATTAGCTATTGCTGCTCGTGATTCTGTTGCT
AAATTAGGAGGACAAACTTATAGCGTTGCATTAGGGAGAAGCGATGCTAGAACTGCCAAC
TTTAGTGGTGCTATAAATCAACTTCCAGCTCCATTCGACAACCTAACAGTCCAAATACAG
AAATTCAGCGACAAAAATTTCACCCTCCGTGAAATGGTTGCACTAGCTGGTGCACACACG
GTAGGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACGTTAATCCTGCCGCACAA
CTCCAATGCAACTGCTCCGCCACGCTAACTGATTCTGATTTGCAACAATTGGATACTACT
CCTACTATGTTCGACAAAGTTTACTACGATAACTTAAACAGCAACCAAGGCATAATGTTT
TCAGATCAAGTTTTGACCGGGGATGCTACAACTGCTGGTTTTGTAACGGATTATAGCAAC
GATGTGAACGTTTTCCTTGGAGATTTTGCTGCTGCCATGATCAAGATGGGAGACTTGCCC
CCCTCCGCCGGCGCTCAATTGGAAATTCGTGATGTTTGTAGCAGGGTTAATCCCACTTCA
GTGGCTTCTATGTGA

Peptide Sequence

PEP ID

Solyc02g079500.4.1
PEP Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

MGFRLSHLSLALSFVALALAGVAIYRNTYEAIIMKNGSLLKNVSPDFDSLESGVASILTL
NNNKKRNSDKYLRQQLTPEACVFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGG
ILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVA
KLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHT
VGFARCSTVCTSGNVNPAAQLQCNCSATLTDSDLQQLDTTPTMFDKVYYDNLNSNQGIMF
SDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTS
VASM*

Transcript Sequence

Transcript ID

Solyc02g079500.4.1
Transcript Infomation

Peroxidase (AHRD V1 **** Q50LG4_TOBAC)%3B contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site IPR019794 Peroxidase%2C active site IPR002016 Haem peroxidase%2C plant/fungal/bacterial
Sequence

AGAGGCATAAATAAAAGCAAAATCATCCCTATCGAAAGCCTTTAATTTGTTTCCTCGATA
GACATTTAAATTAAGTGATGGGTTTTCGTTTGAGTCATTTGAGTCTTGCATTGAGTTTTG
TGGCACTTGCACTTGCAGGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGA
AAAACGGTTCACTCCTCAAAAATGTTTCTCCAGATTTCGATTCGTTGGAATCAGGCGTAG
CCAGTATTTTAACCTTAAATAATAATAAGAAGAGAAATTCAGACAAGTACTTGAGACAGC
AACTAACTCCGGAGGCATGCGTTTTCTCAGCTGTACGAGCAGTTGTGGACAGTGCTATTG
ATGCAGAAACTCGCATGGGAGCTTCTCTCATTCGTCTCCACTTTCATGACTGCTTCGTTG
ATGGTTGTGATGGAGGTATTCTGCTAGATGATATTAATGGAACATTTACAGGGGAACAAA
ACTCACCACCCAACGCCAACTCAGCCAGAGGTTATGAAGTAATAGCACAAGCTAAACAAA
GTGTCATAAACACATGCCCCAACGTATCTGTATCTTGTGCCGACATATTAGCTATTGCTG
CTCGTGATTCTGTTGCTAAATTAGGAGGACAAACTTATAGCGTTGCATTAGGGAGAAGCG
ATGCTAGAACTGCCAACTTTAGTGGTGCTATAAATCAACTTCCAGCTCCATTCGACAACC
TAACAGTCCAAATACAGAAATTCAGCGACAAAAATTTCACCCTCCGTGAAATGGTTGCAC
TAGCTGGTGCACACACGGTAGGTTTCGCCAGGTGTTCCACAGTTTGCACCAGCGGTAACG
TTAATCCTGCCGCACAACTCCAATGCAACTGCTCCGCCACGCTAACTGATTCTGATTTGC
AACAATTGGATACTACTCCTACTATGTTCGACAAAGTTTACTACGATAACTTAAACAGCA
ACCAAGGCATAATGTTTTCAGATCAAGTTTTGACCGGGGATGCTACAACTGCTGGTTTTG
TAACGGATTATAGCAACGATGTGAACGTTTTCCTTGGAGATTTTGCTGCTGCCATGATCA
AGATGGGAGACTTGCCCCCCTCCGCCGGCGCTCAATTGGAAATTCGTGATGTTTGTAGCA
GGGTTAATCCCACTTCAGTGGCTTCTATGTGAAAAATTCGGAAATTTTAATTAACTTATC
TCGCGACTAGTTGCTTCATGTTTTCTTCAAAATAAAAGAATCACTGGCTCCAGAATGTGG
TTTGGTTTTGGTATTTGTTTTGTAATCCATCCTATTTTATATGAATATTGTTTTCCTTGT
GTGC