Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g079450.1.1
CDS Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2)
Sequence	ATGGCTAGCCTTCAAATTTTCTGTGTTCTGCTCTTTTCACTCTTTTTGGCAAAATGTTAC TACTCCAAAGAAGAAGATTTTGTCCAGTGTCTTTCTAAATCTCCTGAAACAAACATTACA CAAAACATTTACACCCCAGGCTCCCCAATTTATTCATCTATCCTGGAATATGCCCAAAAA AATCCGAGATGGTTGAATTCTTCACATCCCAATTTCATTGCTTCCCCTAAGGAAGAATCA GAAATCAGGCCTGTCATTCTTTGTAGTAAAAAAACAGGCCTACAAATCAAGATCAAAAGC GGTGGTCACGATTATGAAGGCATATCTTTTCGCTCTGAATCCCCTTTTGTTATGCTTGAT TTAAGCAATCTTAACAAAATCGAGACTGATTTAAATGAAGAAACAATTTGGGTTCAAACA GGGGCGACCCTTGGCCAACTTTACTATGCAATTGCCAAGAAAAGTAAAGTTCATGCATTT CCAGGCGGTGTCTGCTTTACTGTTGGCACTGGCGGAATCATCAGTGGTGGTGGGCTCGGT GCATTGATGAGGAAATTCGGCCTGGCAGCTGATAACGTTGTAGATGCACGTGTGATGGAT GTGAATGGAAAAATTCTTGAACGAAAGATGAATGAAGATTTATTTTGGGCGATAAGAGGA GGTGGAGGAGCAAGTTTCGGTGTTATTCTAGCATGGAAACTAAAATTGGTTCGTGTTCCT GAAAAGGTTACTGTTTTCACGATTCGTAGGGAGTTAGAGGGTAACCTAACTCTCCTCCGA AAATGGGAAAACATAGCATATCAACTCTCTGAAGATTTATTTGTCAGGGCGTTTGTTCAA AAAGGGGTATTTTCAGGTGGAAATGATACCAAAAACCAAGTGGGATTTTATTTCCAGGGG CAATATATTGGGCCTGTTGACAAATTAATTCCTCTGCTCAATCAATACTTCCCTGAGTTT AATTTGGAGCGAAAAGATTGCTTCCAAGAGAATATTACTGCTGATGCAGAGAAAGAATGC CTGGAAGTTCCCTGGATCAGATCAGTGTTGTATTTCTCTTGGAGAAACCCAAATGATTCA CTTGAAGTTTTGCTAGAGAAGAGTATTCCAACACACAAGGTTTATCACAAAGGAACATCT GATTTCGTGAAGATTCCAATTCCAGAAAGTGGTTGGGAAATGATAGAAAAATTGTTTCGG GAAGAAGAAAGACCTCAGATGGTTTTTGAGCCATTAGGTGGAAAAATGTATGAAATTTCT GAATCTGAAATTCCTTTTCCTCATCGAAAGGAGAATTTGTATACTATCCAGTACTTTGTG AGCTGGGACGATAACAGTGAGAGCGTATCAAGCGAGAAAATAGGATGGATAAGGAAATTG TACAAGGAAATGGAGCCATATGTAGCAAAATCTCCAAGAAGTGCTTATCTAAATTACAGG GACTTTGGTCTAGGAACAAATTCAGAGGACTACAGCTATTCCAAGGCCAAAATATGGGGT GAAAAGTATTTCAAAGGCAATTTCGAGAAGCTGGCTAAAGTGAAGAGTAAAGTAGATCCA AAAAATTTCTTCAGAAGTGAACAAAGTGTAACACCTTATCAGTTATCATATTGA

Peptide Sequence

PEP ID	Solyc02g079450.1.1
PEP Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2)
Sequence	MASLQIFCVLLFSLFLAKCYYSKEEDFVQCLSKSPETNITQNIYTPGSPIYSSILEYAQK NPRWLNSSHPNFIASPKEESEIRPVILCSKKTGLQIKIKSGGHDYEGISFRSESPFVMLD LSNLNKIETDLNEETIWVQTGATLGQLYYAIAKKSKVHAFPGGVCFTVGTGGIISGGGLG ALMRKFGLAADNVVDARVMDVNGKILERKMNEDLFWAIRGGGGASFGVILAWKLKLVRVP EKVTVFTIRRELEGNLTLLRKWENIAYQLSEDLFVRAFVQKGVFSGGNDTKNQVGFYFQG QYIGPVDKLIPLLNQYFPEFNLERKDCFQENITADAEKECLEVPWIRSVLYFSWRNPNDS LEVLLEKSIPTHKVYHKGTSDFVKIPIPESGWEMIEKLFREEERPQMVFEPLGGKMYEIS ESEIPFPHRKENLYTIQYFVSWDDNSESVSSEKIGWIRKLYKEMEPYVAKSPRSAYLNYR DFGLGTNSEDYSYSKAKIWGEKYFKGNFEKLAKVKSKVDPKNFFRSEQSVTPYQLSY*

Transcript Sequence

Transcript ID	Solyc02g079450.1.1
Transcript Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2)
Sequence	ATGGCTAGCCTTCAAATTTTCTGTGTTCTGCTCTTTTCACTCTTTTTGGCAAAATGTTAC TACTCCAAAGAAGAAGATTTTGTCCAGTGTCTTTCTAAATCTCCTGAAACAAACATTACA CAAAACATTTACACCCCAGGCTCCCCAATTTATTCATCTATCCTGGAATATGCCCAAAAA AATCCGAGATGGTTGAATTCTTCACATCCCAATTTCATTGCTTCCCCTAAGGAAGAATCA GAAATCAGGCCTGTCATTCTTTGTAGTAAAAAAACAGGCCTACAAATCAAGATCAAAAGC GGTGGTCACGATTATGAAGGCATATCTTTTCGCTCTGAATCCCCTTTTGTTATGCTTGAT TTAAGCAATCTTAACAAAATCGAGACTGATTTAAATGAAGAAACAATTTGGGTTCAAACA GGGGCGACCCTTGGCCAACTTTACTATGCAATTGCCAAGAAAAGTAAAGTTCATGCATTT CCAGGCGGTGTCTGCTTTACTGTTGGCACTGGCGGAATCATCAGTGGTGGTGGGCTCGGT GCATTGATGAGGAAATTCGGCCTGGCAGCTGATAACGTTGTAGATGCACGTGTGATGGAT GTGAATGGAAAAATTCTTGAACGAAAGATGAATGAAGATTTATTTTGGGCGATAAGAGGA GGTGGAGGAGCAAGTTTCGGTGTTATTCTAGCATGGAAACTAAAATTGGTTCGTGTTCCT GAAAAGGTTACTGTTTTCACGATTCGTAGGGAGTTAGAGGGTAACCTAACTCTCCTCCGA AAATGGGAAAACATAGCATATCAACTCTCTGAAGATTTATTTGTCAGGGCGTTTGTTCAA AAAGGGGTATTTTCAGGTGGAAATGATACCAAAAACCAAGTGGGATTTTATTTCCAGGGG CAATATATTGGGCCTGTTGACAAATTAATTCCTCTGCTCAATCAATACTTCCCTGAGTTT AATTTGGAGCGAAAAGATTGCTTCCAAGAGAATATTACTGCTGATGCAGAGAAAGAATGC CTGGAAGTTCCCTGGATCAGATCAGTGTTGTATTTCTCTTGGAGAAACCCAAATGATTCA CTTGAAGTTTTGCTAGAGAAGAGTATTCCAACACACAAGGTTTATCACAAAGGAACATCT GATTTCGTGAAGATTCCAATTCCAGAAAGTGGTTGGGAAATGATAGAAAAATTGTTTCGG GAAGAAGAAAGACCTCAGATGGTTTTTGAGCCATTAGGTGGAAAAATGTATGAAATTTCT GAATCTGAAATTCCTTTTCCTCATCGAAAGGAGAATTTGTATACTATCCAGTACTTTGTG AGCTGGGACGATAACAGTGAGAGCGTATCAAGCGAGAAAATAGGATGGATAAGGAAATTG TACAAGGAAATGGAGCCATATGTAGCAAAATCTCCAAGAAGTGCTTATCTAAATTACAGG GACTTTGGTCTAGGAACAAATTCAGAGGACTACAGCTATTCCAAGGCCAAAATATGGGGT GAAAAGTATTTCAAAGGCAATTTCGAGAAGCTGGCTAAAGTGAAGAGTAAAGTAGATCCA AAAAATTTCTTCAGAAGTGAACAAAGTGTAACACCTTATCAGTTATCATATTGA