Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g079440.2.1
CDS Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)
Sequence	ATGTTCCTCAAAAGAAAAAGAAAAATTATGGGTAACCTTCAAATCCTCTCTCTTTTAATC TTTTCCTTCTTTTTGTCAAAATGTTACTCCAAACAAGAAGATTTTGTTCAGTGTCTTTCT AAATACTCTAAAACCAACGTTACACACAACATTTACACCCCAAAATCTCCAACCTATTCA TCTATCTTAGAATATGCTCAAAAAAATCCTAGATGGATGAATTCTTCACATCCCATTTTC ATTGTTTCCCCTACAAAAGAATCACAAATCAAGCCGGTTATTCGCTGTGCAAAAAAACTA GGGTTGCAAATGAAAATAAAAAGTGGTGGCCATGACTATGAAGGCATATCTTTTCGCTCT AAAACCCCTTTTGTTATGCTTGATTTAAGCAATCTTAACAAAATCAAGATTGATTTAAAT GAAGGAACAGTTTGGGTTCAAGCAGGGGCAACCCTCGGCCAGCTTTACTATGCAATTGCT AAAAAAAGTAATGTGCATGGTTTTGCTGGAGGTGTTTGTTTCAGTATTGGCACTGGAGGG ATTATTAGTGGTGGAGGGTTAGGTACTTTGATGAGAAAATTCGGGCTTGCAGCTGATAAT GTTGTAGATGCTCGCGTAATAGATGTAAATGGAAAAATTCTTAATAAGAACAAAATGAAT GAAGATCTGTTTTGGGCAATAAGAGGAGGTGGAGGAGCAAGTTTTGGTGTTATTTTAGCA TGGAAACTCAAACTTGTTCCTGTCCCGGAGAAAGTTACTGTTTTCAATGTTTACAAGAGG TTAGAGGGTAACCACAATCTCCTCACAAAATGGGAAAGCACCGCGCATCAATTACCTGAT AAATTACTTATCAGAGTAATTATACAAAATGATGGAACAGAGAATGACAAGTACGTTGAA GTAATCTTTCAATCACTATACCTCGGACCTGTTGATGAGTTAATTCCATTGCTCAAAGAA AAATTCCCTGAATTTGATTTGGACAAAAAGGATTGCTTCCAAGAGCCTGTTGTGGATTGT AGTAACAGGCCTTGTATTAAGAAAGAATGTCGCGAATCTTCCTGGATTGGATCAGTCCTG TATTTCTATGGTAGGAGAACAAATGAATCACTTGAAGTTCTGCTAGAAAAGAGTATTCCA ACACAGAAGAATTATTTCAAAGCCACATCTGATTTTGTGAAGACTCCAGTTCCGGAAAGT GGTTGGGAAATGGTTGAAAAAATGTTTTTGGAAGAAGAAAGACCTCAGATGATAATGGAG CCATTAGGTGGGATATTAGATGAAATATCAGAATCTGAAATTCCATTCCCTCATAGAAAG GGGAATTTGTATAATATTCAGTACTTGGTGAACTGGGGCGATAACAGCGAGAGTATATCA AGCCAGAAGATAAGATGGATGAGGAAACTTTACAAGAAAATGGAGCCATATGTTGCAAAA TCACCAAGAAGTGCTTATCTGAACTATAGGGATCTTGATTTTGGAACAAATTCAGAGGAC TATAGTTATTCCAAGGCTAAAAAATGGGGTGAAAAGTATTACAGTGGAAACTTTGAGAGA TTGGCTAAAGTGAAGAGTGAGGTAGATCCCAAAAATTTCTTCAGATATGAACAAAGCATT CCACCTTATCACACTGATAGCTGA

Peptide Sequence

PEP ID	Solyc02g079440.2.1
PEP Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)
Sequence	MFLKRKRKIMGNLQILSLLIFSFFLSKCYSKQEDFVQCLSKYSKTNVTHNIYTPKSPTYS SILEYAQKNPRWMNSSHPIFIVSPTKESQIKPVIRCAKKLGLQMKIKSGGHDYEGISFRS KTPFVMLDLSNLNKIKIDLNEGTVWVQAGATLGQLYYAIAKKSNVHGFAGGVCFSIGTGG IISGGGLGTLMRKFGLAADNVVDARVIDVNGKILNKNKMNEDLFWAIRGGGGASFGVILA WKLKLVPVPEKVTVFNVYKRLEGNHNLLTKWESTAHQLPDKLLIRVIIQNDGTENDKYVE VIFQSLYLGPVDELIPLLKEKFPEFDLDKKDCFQEPVVDCSNRPCIKKECRESSWIGSVL YFYGRRTNESLEVLLEKSIPTQKNYFKATSDFVKTPVPESGWEMVEKMFLEEERPQMIME PLGGILDEISESEIPFPHRKGNLYNIQYLVNWGDNSESISSQKIRWMRKLYKKMEPYVAK SPRSAYLNYRDLDFGTNSEDYSYSKAKKWGEKYYSGNFERLAKVKSEVDPKNFFRYEQSI PPYHTDS*

Transcript Sequence

Transcript ID	Solyc02g079440.2.1
Transcript Infomation	FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)
Sequence	ATGTTCCTCAAAAGAAAAAGAAAAATTATGGGTAACCTTCAAATCCTCTCTCTTTTAATC TTTTCCTTCTTTTTGTCAAAATGTTACTCCAAACAAGAAGATTTTGTTCAGTGTCTTTCT AAATACTCTAAAACCAACGTTACACACAACATTTACACCCCAAAATCTCCAACCTATTCA TCTATCTTAGAATATGCTCAAAAAAATCCTAGATGGATGAATTCTTCACATCCCATTTTC ATTGTTTCCCCTACAAAAGAATCACAAATCAAGCCGGTTATTCGCTGTGCAAAAAAACTA GGGTTGCAAATGAAAATAAAAAGTGGTGGCCATGACTATGAAGGCATATCTTTTCGCTCT AAAACCCCTTTTGTTATGCTTGATTTAAGCAATCTTAACAAAATCAAGATTGATTTAAAT GAAGGAACAGTTTGGGTTCAAGCAGGGGCAACCCTCGGCCAGCTTTACTATGCAATTGCT AAAAAAAGTAATGTGCATGGTTTTGCTGGAGGTGTTTGTTTCAGTATTGGCACTGGAGGG ATTATTAGTGGTGGAGGGTTAGGTACTTTGATGAGAAAATTCGGGCTTGCAGCTGATAAT GTTGTAGATGCTCGCGTAATAGATGTAAATGGAAAAATTCTTAATAAGAACAAAATGAAT GAAGATCTGTTTTGGGCAATAAGAGGAGGTGGAGGAGCAAGTTTTGGTGTTATTTTAGCA TGGAAACTCAAACTTGTTCCTGTCCCGGAGAAAGTTACTGTTTTCAATGTTTACAAGAGG TTAGAGGGTAACCACAATCTCCTCACAAAATGGGAAAGCACCGCGCATCAATTACCTGAT AAATTACTTATCAGAGTAATTATACAAAATGATGGAACAGAGAATGACAAGTACGTTGAA GTAATCTTTCAATCACTATACCTCGGACCTGTTGATGAGTTAATTCCATTGCTCAAAGAA AAATTCCCTGAATTTGATTTGGACAAAAAGGATTGCTTCCAAGAGCCTGTTGTGGATTGT AGTAACAGGCCTTGTATTAAGAAAGAATGTCGCGAATCTTCCTGGATTGGATCAGTCCTG TATTTCTATGGTAGGAGAACAAATGAATCACTTGAAGTTCTGCTAGAAAAGAGTATTCCA ACACAGAAGAATTATTTCAAAGCCACATCTGATTTTGTGAAGACTCCAGTTCCGGAAAGT GGTTGGGAAATGGTTGAAAAAATGTTTTTGGAAGAAGAAAGACCTCAGATGATAATGGAG CCATTAGGTGGGATATTAGATGAAATATCAGAATCTGAAATTCCATTCCCTCATAGAAAG GGGAATTTGTATAATATTCAGTACTTGGTGAACTGGGGCGATAACAGCGAGAGTATATCA AGCCAGAAGATAAGATGGATGAGGAAACTTTACAAGAAAATGGAGCCATATGTTGCAAAA TCACCAAGAAGTGCTTATCTGAACTATAGGGATCTTGATTTTGGAACAAATTCAGAGGAC TATAGTTATTCCAAGGCTAAAAAATGGGGTGAAAAGTATTACAGTGGAAACTTTGAGAGA TTGGCTAAAGTGAAGAGTGAGGTAGATCCCAAAAATTTCTTCAGATATGAACAAAGCATT CCACCTTATCACACTGATAGCTGA