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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g079110.3.1
CDS Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A118JSZ2_CYNCS)
Sequence

ATGGGGGAAGAAGCTTCAGAGCAGCAGCTTGTTATAGAATCCATGGATGAAGATGCTGTA
GAGCTACCGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCT
TGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTC
AGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTCTCCTGATGGTTCT
GGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGCCATATGATGAA
AGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGATTCGTATGCTGCAAGT
CTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCT
TCAAGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGG
GATGCTACTACTGGACAGTTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATC
ACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAAGATATTTGCTGGTTACAAC
AAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACC
CTTCAAGGAAATAAAGAAGGGCAATCAGGAATTATATCCTCAATGGCTTTCTGTCCAAGC
CATTCAGGGTTATTGGCAACTGGCTCATATAGCCAAACTACTGCCATACATAGGGAAGAT
AACATGGAACTTCTCTATGTCTTGCATGGTCAAGAAGGTGGGGTTACACATGTCCAATTC
TCAAAAGACGGAAACTACTTGTACACTGGTGGCCGGAAGGACCCTTACATACTGTGCTGG
GACATTCGGAAGACTGCTGAAATTGTTTACAAGATGTACAGATCATCAGAAACTACCAAT
CAGCGGATATATTTTGATATTGAACCTCGAGGTCAGCATCTCGGCTCCGGAGGACAGGAT
GGCTCAGTTCACATTTATAATCTTCAAACCGGACAGTGGGTATCCAGCTTCCGAGCTGCA
TCAGACACGGTTAATGGCTTTTCATTTCATCCTTTCCTGCCGATGGCTGCCTCTTCATCA
GGCCAACGGAGATTTGGAGTTATAGATGACTCCCACGAGGATATGCTCCTTACAGGTGAT
GAAAATTGTGTTTCTGTGTGGAGCTTCGCCTATTCAGCATCTGTAGAAAATGATGTTAGT
CCCATTTCCGGGGTCTCAAATGGTAAATCTGAGCTCGATGAGGACCTTCACGTTCTTCAA
GAACCTTGA

Peptide Sequence

PEP ID

Solyc02g079110.3.1
PEP Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A118JSZ2_CYNCS)
Sequence

MGEEASEQQLVIESMDEDAVELPETPIEAVEEKPSEEPYPWPVIQYDVPPYLTYHFFNQF
RTPSNPNNFLKGVKWSPDGSGFLTCSDDNTFCLYNLPYDESGQLADFSSSAADTDSYAAS
LVMSDGESVYDYCWYPYMSSSSPETCVFASTTRDHPIHLWDATTGQLRCTYRAYDAMDEI
TAAFSIAFNPAGTKIFAGYNKSIRIFDIHRPGRDFTQHSTLQGNKEGQSGIISSMAFCPS
HSGLLATGSYSQTTAIHREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCW
DIRKTAEIVYKMYRSSETTNQRIYFDIEPRGQHLGSGGQDGSVHIYNLQTGQWVSSFRAA
SDTVNGFSFHPFLPMAASSSGQRRFGVIDDSHEDMLLTGDENCVSVWSFAYSASVENDVS
PISGVSNGKSELDEDLHVLQEP*

Transcript Sequence

Transcript ID

Solyc02g079110.3.1
Transcript Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A118JSZ2_CYNCS)
Sequence

ATAACACGTAGTTATAATTTTGACCATTTTGATTTTTAGCTAAGCTAAAACCGAAAAAAA
ACCCAACACTTGTTTTTGGCGCTAACACCGTTCACAGTGAATCCATGGGGGAAGAAGCTT
CAGAGCAGCAGCTTGTTATAGAATCCATGGATGAAGATGCTGTAGAGCTACCGGAAACCC
CTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGT
ATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACC
CTAATAATTTCTTAAAGGGTGTCAAATGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCT
CTGATGATAATACCTTTTGTTTATATAACTTGCCATATGATGAAAGTGGACAGCTTGCTG
ATTTTTCCTCATCAGCTGCTGATACAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACG
GGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTCCAGAGACAT
GTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGAC
AGTTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAA
TTGCCTTCAATCCCGCAGGGACTAAGATATTTGCTGGTTACAACAAATCCATAAGAATAT
TTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAG
AAGGGCAATCAGGAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGG
CAACTGGCTCATATAGCCAAACTACTGCCATACATAGGGAAGATAACATGGAACTTCTCT
ATGTCTTGCATGGTCAAGAAGGTGGGGTTACACATGTCCAATTCTCAAAAGACGGAAACT
ACTTGTACACTGGTGGCCGGAAGGACCCTTACATACTGTGCTGGGACATTCGGAAGACTG
CTGAAATTGTTTACAAGATGTACAGATCATCAGAAACTACCAATCAGCGGATATATTTTG
ATATTGAACCTCGAGGTCAGCATCTCGGCTCCGGAGGACAGGATGGCTCAGTTCACATTT
ATAATCTTCAAACCGGACAGTGGGTATCCAGCTTCCGAGCTGCATCAGACACGGTTAATG
GCTTTTCATTTCATCCTTTCCTGCCGATGGCTGCCTCTTCATCAGGCCAACGGAGATTTG
GAGTTATAGATGACTCCCACGAGGATATGCTCCTTACAGGTGATGAAAATTGTGTTTCTG
TGTGGAGCTTCGCCTATTCAGCATCTGTAGAAAATGATGTTAGTCCCATTTCCGGGGTCT
CAAATGGTAAATCTGAGCTCGATGAGGACCTTCACGTTCTTCAAGAACCTTGATCCATTT
AGGGACTTGTGTATAAACTTATCGTTGCATGGGCTAACATCACCTCCATTTACCACAACT
AATCCATGCTTAACAAACTCTATTTATGAATGTATGCACATTAGCTCTGCTGCTTTAAAT
ATTCTTCCAGTTGTTTTATTAGCTCATAGATGTTACTTTCTGTATTTGCCTCATTTGAAC
TTATTTTACCAGTTTTGATAGATGTGACAACTGAAGAATAGGTTGGATAGCTTAAATTAT
GCAAGAAGAAATTTACTACATGCAAGTTCTATAGAATATATATTTCTCAATG