Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g079050.3.1
CDS Infomation

Anaphase-promoting complex subunit 4 (AHRD V3.3 *** A0A151T237_CAJCA)
Sequence

ATGGAAACTGATGAAAACCAGCGGATTCTTCCATTTCAGCTTCAGTTCGACAAACCCATT
GCTTCTCAGATTAAAATTGCTGAATGGAATCCAGAAAAAGATTTACTTGCTATGGTTACA
GAAGACTCCAAGGTTCTACTTCATCGTTTCAATTGGCAAAGGCTCTGGACTGTTACTCCC
GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTT
GAAGATGGGACCATCTCCTTGCATGATGTAGAAAATGGAAAGCTGCTGCGAAACATAAAA
TCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAGGACATGAAC
AGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTT
CCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCT
TTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAG
GATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTAATATACAC
AACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCT
TCCATTTGTAAGGTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGG
GAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCAC
TGCTTAGTCCTCAATACTTCAATATTTTCCAAAAGGAAAACTGAACTTCACCAGGTTGCC
CAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATG
TCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACA
TTGATCGCTGATCATGGACTTGACTCTACTCCTCAGGATGAGTTTCTAAGCCTTTTAGGT
GGCGCCAGAGCCAGTCCTCCGCTTCATCAGTTTTTAGAAAATTCTCTTGGTGAGGCGGGT
CTGAAGCGGGTAGCAAAGGCAGTTAATGGTGCGGGGAAAGAGCTTCAGTTAATTGTTCTT
GATCATCTCCAGCCTGCTGCAGAAATTATTGGATTCAGAATTGGAGAATTGAGAGGGCTT
TCAAAATGGCGTGCACGCTATAAAGGTATCGGCCTGGACGAGAAGTTGATGGATAATGCT
ACAGAAAGGGCTGGCATGTTACTCGTACAGGTTGAACGTTTTATGAGGGTTTTAGCTTCT
GTTGTACAGCAGTTTTCAAATTTTTTCAGCTGGCTTCTGAAATCTGTGAAGATTCTAATG
GCTGAACCAAGTGATCAGCTACCATTTAATAGTGAACTTGTTATTATATTCTTGAAATTC
CTGTATGATCAAGATCCTGTAAGGCAGTTACTGGAGCTTTCTGAGGTAGATAGCAGTGTC
GAAGTAGACTTGGAAACGATGGAAAGAATTAAACAACTAGCACATTTTGGAGGGTTTTCA
GATCTAGAATATTTGAAAAGGACGCTTTCACAAGAATTTCAACAAATGGAGGCTTGTTTC
AAAGATGCTTTTGAGATGCCATTTTCTACTATTTCGGAAAAACTACTTTGTGAGGATCTG
CTGCCACTTTTTCCATTTGCATCCTCTTCAAAACTAAAGCCTTACAAGGTTCCTGCATCA
GTGTCCTACTATGAGGACATGTTGCATGATGCTTCAGATAGTGAGATACATCAACATACG
CTCACTAGCTACATATCCTTCAAATTACCAGATGATTCTCTTTCAGTCACAAACTGCATA
GGTATTGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATA
GAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAA
GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAAT
GCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACC
GCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGATTCTGCTATATACCTGCAACTGGAG
AGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGCATCA
AGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAA
GATGAAGATGAAGTTTCTGATACAGAGTGA

Peptide Sequence

PEP ID

Solyc02g079050.3.1
PEP Infomation

Anaphase-promoting complex subunit 4 (AHRD V3.3 *** A0A151T237_CAJCA)
Sequence

METDENQRILPFQLQFDKPIASQIKIAEWNPEKDLLAMVTEDSKVLLHRFNWQRLWTVTP
GKNITSICWRPDGKAIAVGLEDGTISLHDVENGKLLRNIKSHSADVVCLHWEEDGKKDMN
SNTSSYEDRTSRFFPPPPRVPKMPGLVPGDSGFMDDGEDSFQELSNSSHQRYNILCSGDK
DGSICFNIFGIFPIGTVNIHNLVVSSSLSSSNVASRLLNASICKVALSKDLCHLVVLCNG
ELITDEVDQGEGHHGLLGFHCLVLNTSIFSKRKTELHQVAQQASNIEDLSEVIRTSLSVM
SKIWSDAMHTFHEKFNAVSTLIADHGLDSTPQDEFLSLLGGARASPPLHQFLENSLGEAG
LKRVAKAVNGAGKELQLIVLDHLQPAAEIIGFRIGELRGLSKWRARYKGIGLDEKLMDNA
TERAGMLLVQVERFMRVLASVVQQFSNFFSWLLKSVKILMAEPSDQLPFNSELVIIFLKF
LYDQDPVRQLLELSEVDSSVEVDLETMERIKQLAHFGGFSDLEYLKRTLSQEFQQMEACF
KDAFEMPFSTISEKLLCEDLLPLFPFASSSKLKPYKVPASVSYYEDMLHDASDSEIHQHT
LTSYISFKLPDDSLSVTNCIGIVRGLARDLSKVDSIRDPIEAALLCIPDGYHCIDLSLYK
EGQIVLLLNETATTSESSGNAFMMILQAGDLSFVSLSRSTAPNSWKLHELQDSAIYLQLE
SEKVRSIPHSVVSPLAVSASRGVACVFAARKRALVYILDEDEDEVSDTE*

Transcript Sequence

Transcript ID

Solyc02g079050.3.1
Transcript Infomation

Anaphase-promoting complex subunit 4 (AHRD V3.3 *** A0A151T237_CAJCA)
Sequence

AAGTTGCAATAGTTTGTTTTTCTTCAGATTTGGCTTTCCATAATATTCTTTTGGTTTCTC
CGGACTCCGTATTGGAGATTCGGATGGCTCATTGTAGGCCCATTTGGAGTGATGTTTCCT
GCACTAATTTTCTCTGTAGGCCCATTTGAGGCGATGCTTTCGATATTGATTATCTCCAGG
GCTCAAATAGAAGACGTCATCATTATAATGCCCGCTTTCAAAAACACCTAATCGTTATAA
TGCCCTTAACTGTTATAATGCTCGCTTTGAAAACACCTAACCGTTATAATGTCCCTAACC
GTTATAACGCCCGCTTTGAAAAATACCTACTATTTAAAGAAAATCATGTTGTTTTTCTTT
AGAAAAATTTTCTTTTAAATAGTTAAATTAGAAAAATGTTTGGAAGACAAAAAGAAAAAA
ACAAGTTGAAATATTTTAAATTTGGTGGCCCAATTCAAATCAGGAGGAAGAAAAACCCAA
AACCCCGCCCTCTTCAGCTGAGTAGCAGCGATGGAAACTGATGAAAACCAGCGGATTCTT
CCATTTCAGCTTCAGTTCGACAAACCCATTGCTTCTCAGATTAAAATTGCTGAATGGAAT
CCAGAAAAAGATTTACTTGCTATGGTTACAGAAGACTCCAAGGTTCTACTTCATCGTTTC
AATTGGCAAAGGCTCTGGACTGTTACTCCCGGAAAGAACATAACTTCCATATGTTGGCGT
CCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTA
GAAAATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCAT
TGGGAGGAGGATGGGAAGAAGGACATGAACAGTAATACCTCCAGTTATGAAGATCGAACT
TCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGAT
AGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAA
AGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGC
ATATTTCCAATAGGGACAGTTAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGC
AGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAGGTGGCCTTGTCCAAAGAT
CTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGT
GAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCC
AAAAGGAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGT
GAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACA
TTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATGGACTTGACTCTACT
CCTCAGGATGAGTTTCTAAGCCTTTTAGGTGGCGCCAGAGCCAGTCCTCCGCTTCATCAG
TTTTTAGAAAATTCTCTTGGTGAGGCGGGTCTGAAGCGGGTAGCAAAGGCAGTTAATGGT
GCGGGGAAAGAGCTTCAGTTAATTGTTCTTGATCATCTCCAGCCTGCTGCAGAAATTATT
GGATTCAGAATTGGAGAATTGAGAGGGCTTTCAAAATGGCGTGCACGCTATAAAGGTATC
GGCCTGGACGAGAAGTTGATGGATAATGCTACAGAAAGGGCTGGCATGTTACTCGTACAG
GTTGAACGTTTTATGAGGGTTTTAGCTTCTGTTGTACAGCAGTTTTCAAATTTTTTCAGC
TGGCTTCTGAAATCTGTGAAGATTCTAATGGCTGAACCAAGTGATCAGCTACCATTTAAT
AGTGAACTTGTTATTATATTCTTGAAATTCCTGTATGATCAAGATCCTGTAAGGCAGTTA
CTGGAGCTTTCTGAGGTAGATAGCAGTGTCGAAGTAGACTTGGAAACGATGGAAAGAATT
AAACAACTAGCACATTTTGGAGGGTTTTCAGATCTAGAATATTTGAAAAGGACGCTTTCA
CAAGAATTTCAACAAATGGAGGCTTGTTTCAAAGATGCTTTTGAGATGCCATTTTCTACT
ATTTCGGAAAAACTACTTTGTGAGGATCTGCTGCCACTTTTTCCATTTGCATCCTCTTCA
AAACTAAAGCCTTACAAGGTTCCTGCATCAGTGTCCTACTATGAGGACATGTTGCATGAT
GCTTCAGATAGTGAGATACATCAACATACGCTCACTAGCTACATATCCTTCAAATTACCA
GATGATTCTCTTTCAGTCACAAACTGCATAGGTATTGTCAGGGGCCTTGCACGTGATTTG
AGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGA
TATCACTGTATTGATCTCTCGCTTTATAAAGAGGGTCAAATTGTTTTACTATTAAACGAA
ACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGAC
CTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTT
CAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCT
GTGGTCTCTCCCTTGGCAGTTAGTGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGA
AAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGA
CAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGATAAGCCA
GTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTA
GTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACATATATTTAATTTGA
ATTGCATGAAACAATAATCCCGTTCCTATTTGTCTGAAAAAAAGAAAATTCAAGCC