Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g079000.3.1
CDS Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7LB10_MEDTR)
Sequence	ATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAA CCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCT ACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAA CTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTG AAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGT CGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTG TTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGACGTCAAGAAATGGGAT TCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAA ATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCA TACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAGATTCAAGAAAGGT TTGTGGAGGAAGACGACCCCCAAAGGTCTAAAGTTAAAGAAGTTCATTGAAGCAGCAGAT GGAACTCTTATTCATGACAGTTCCTATGTTGGTGAAGATGCTTGGGCAGATGATTCTGGC AGTCATAATATGAAAGAGGTGATAGACCATGATAGTAGATTGAGAGTAGAGGATAAAGAG ACTCTGAAAGAGAATCTTGGAATTTCAGCTGAAAATCAGGATACGGGAGGAACATGGCGT GCAAGACTTCAAGAATGGCACAAAATTCTTAGGAAGGAGAAGATGGCAGAACAATTAGAT TCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGC AAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAA AGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACT TCTGAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAA GAAGGATTCCCTCTTGAATATATTGTTGATATTCCACTAGATCCTTTCTTATTTGAGATG ATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTC AAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATG ATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGAT ATGGCTTATGCTGAAAATTTTATTTTGCCAGTTGGAGAAGTTGGTGAGACGAAATCGATG TATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTAT ATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGGGGTGTGCTTCTG TCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGG ATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCA CGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAATGCTCCAGCTTTTGTATTTATAGAT GAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTT GAGGCTCTGATTTCTCAGCTTGACGGGGAGAAAGAAAAAACTGGTGTTGATAGGTTTTCA CTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAA TTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAA CGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTT GAGAAACTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAAT GAAGCTGGAATAATGTCTGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTC GATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAG CAGAAGTGTGAGCAAAGTGTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCT GGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTT CTACCTGGGGGCAAGGAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGAT CAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGC TGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAA AAGATTACCAAGATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTC ACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATT ATAAAATATAAGTGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCT GAGCTATTTACTCGTGAATTGACAAGGTATATTGATGAGACGGAAGAACTTGCAATGAGG GGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCA AGAATAACTGGATTGGAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAA GATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGAAGGACCATTGCCTCATAATGAC CGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAA

Peptide Sequence

PEP ID	Solyc02g079000.3.1
PEP Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7LB10_MEDTR)
Sequence	MHLTTTPPPQQLNSIQLSSKPLLLTLPFKCRRKFSRIRRPTIVASSSNTNNSPEGFSWLQ LSQSIRRGSERFLNQLEDSVKQETGFDFKDVKVKVGEFSGRAVDSAKNGQVLLQRFQSEL FPEFLNWNKFESWKDVKKWDSKRVGVFILYIIVTVCSCQKIYMAIRAPIINRERKELTEA YMEALIPEPTPVNVKRFKKGLWRKTTPKGLKLKKFIEAADGTLIHDSSYVGEDAWADDSG SHNMKEVIDHDSRLRVEDKETLKENLGISAENQDTGGTWRARLQEWHKILRKEKMAEQLD SVNARYVVEFDMKEVENSLRKDVVEKTRETQGTRALWISKRWWRYRPKLPYTYFLQKLDT SEVAAIVFTEDLKRVFVTMKEGFPLEYIVDIPLDPFLFEMISSSGAEVDLLQKRQIHYFF KVLFALLPGILILWFIRESMMLLNITTNRLLYKKYKQLFDMAYAENFILPVGEVGETKSM YKEIVLGGDVWDLLDELMIYMGNPMQYYEKDVKFVRGVLLSGPPGTGKTLFARTLAKESG MPFVFASGAEFTDSEKSGAARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATF EALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQ RVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIV DVLDKQLLEGMGVLLTEEEQQKCEQSVSREKRQLLAVHEAGHIVLAHLFPQFDWHAFSQL LPGGKETAVSVFYPREDVVDQGYTTFGYMKMQMVVAHGGRCAERIVFGDDITDGGVDDLE KITKIAREMVISPRNSRLGLTSLTKKIGLGDRPDNPDGEIIKYKWDDPHIVPADMTVEVA ELFTRELTRYIDETEELAMRGLLANRHILDLISNELLEHSRITGLEVEDKMRGLQPAMFE DFVKPFQINMEEEGPLPHNDRLSYQPLDIYPAPLHRS*

Transcript Sequence

Transcript ID	Solyc02g079000.3.1
Transcript Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7LB10_MEDTR)
Sequence	TTAAGAAAATCAAAGCCTGCAGATAAACCTCTATATAAAAAAAATTAACAAAACCCCAAA GCCCCATTCGGTTTTTCCGACGACCAAGACCGGCGACAATTCAGTTTTTCCGACGAGCAA GAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCAC TACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCAC ATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTC TTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCAT TCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGG TTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTC AGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTT GAATTGGAACAAATTCGAGTCCTGGAAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGG TGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAAT TCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATT GATTCCTGAACCTACTCCTGTTAATGTCAAAAGATTCAAGAAAGGTTTGTGGAGGAAGAC GACCCCCAAAGGTCTAAAGTTAAAGAAGTTCATTGAAGCAGCAGATGGAACTCTTATTCA TGACAGTTCCTATGTTGGTGAAGATGCTTGGGCAGATGATTCTGGCAGTCATAATATGAA AGAGGTGATAGACCATGATAGTAGATTGAGAGTAGAGGATAAAGAGACTCTGAAAGAGAA TCTTGGAATTTCAGCTGAAAATCAGGATACGGGAGGAACATGGCGTGCAAGACTTCAAGA ATGGCACAAAATTCTTAGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAG GTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGA GAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATA TCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTGGCTGC TATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCT TGAATATATTGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGG AGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGC TTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACAT CACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGA AAATTTTATTTTGCCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGT ATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAAT GCAATATTATGAGAAAGATGTCAAATTTGTGCGGGGTGTGCTTCTGTCTGGCCCCCCTGG AACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATT TGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAAT GTTTTCTGTTGCTAGGAGAAATGCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTAT TGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTC TCAGCTTGACGGGGAGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGT CATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGG ACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTT TGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAACTTGTCTT TCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAAT GTCTGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAA GCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAGCAGAAGTGTGAGCA AAGTGTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCTGGTCACATTGTGTT GGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGGGGGCAA GGAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAAC CTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTAT TGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAGAT TGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAA AAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAGTG GGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCG TGAATTGACAAGGTATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAA CAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATT GGAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCC TTTCCAAATAAACATGGAGGAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCA ACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGA GTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACA ATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTA GTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTT TCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAG AGCAACTTTGTACAAGAAAGAC