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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g078830.3.1
CDS Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G65030.1)
Sequence

ATGAGTTTAATTGCAGGTTCATACGAGAGATTCATTTGGGGATTCAAGTTGAGATCCCTC
AAAAACGATCAGAATTACGAACTAACCCCTCTATTCTCCTTCCCTTCACATCTCTCACCA
ATTAAATGCACCGCCGTCGCCGGTTCTGCCGCTGTATCCGGCGGCGCCGATGACACTATC
AAAATCTATGACCTTTCTACTTGCTCAGAAATTGGGTCACTACACCACTCCGCCACCGTT
ACTTCACTTTCCTTTTTTACCCCTTCTTCATTCTCCTTCCCTCGTAACCTTATTGCCGCG
TCTGAAGATGGTTCGGTTTCCATATATGATGCTGATCCTTTTGTTCATCTCAAGACGGTT
AAAGTGCATCGTAAGGCAGTGAATTCTATATGCATTCATCCGTCGGGGAGGTTGGCATTG
ACTGTTGGAAGAGATGAATGTATGGCTATGGTTAATTTGGTTAGAGGAAGGAGAAGTTTT
TATTGTAGGTTGGGAAAAGAAGCTTCTTTAGTTAATTTTAGTGATGGTGGTGAAAAGTTT
TTTATGGTTATGGATGATAAGATTTCTGTACATGAATCTGAAGATGCCAAAGCTATTCTA
GAGCTTGACAGTAAGAAGAGGGTGCTTTGTGCCACTTATGGGATGCATGGTATTTTGTTT
ACTGGGGGAGAGGACCGGAGTATTAAAGCTTGGGACATTACTAGTGGAAAACTTGCATAT
AGCATTGAAGATGCACATTCTACCCGTGTGAAAGGCATTGTTGTGCTACACAAAAACAGT
GATGGTGATGCTGAAGATCATCAACACATAGTAGCATCAGCATCATCAGATGGGGTCATA
CGTGTTTGGGATGTTCGCATGACTAACAAAGATAAGCCAAATCCACTGGCTGAGGTCAAT
ACAAAATCCAGGCTGACTTGTCTGGCTGGATCATCCATCAAATCTATGAAAAGACCACAG
GTTGGAAATACTACTTCAAATGGACAACAGCTCGACGCAGGTGAAGAATCATAG

Peptide Sequence

PEP ID

Solyc02g078830.3.1
PEP Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G65030.1)
Sequence

MSLIAGSYERFIWGFKLRSLKNDQNYELTPLFSFPSHLSPIKCTAVAGSAAVSGGADDTI
KIYDLSTCSEIGSLHHSATVTSLSFFTPSSFSFPRNLIAASEDGSVSIYDADPFVHLKTV
KVHRKAVNSICIHPSGRLALTVGRDECMAMVNLVRGRRSFYCRLGKEASLVNFSDGGEKF
FMVMDDKISVHESEDAKAILELDSKKRVLCATYGMHGILFTGGEDRSIKAWDITSGKLAY
SIEDAHSTRVKGIVVLHKNSDGDAEDHQHIVASASSDGVIRVWDVRMTNKDKPNPLAEVN
TKSRLTCLAGSSIKSMKRPQVGNTTSNGQQLDAGEES*

Transcript Sequence

Transcript ID

Solyc02g078830.3.1
Transcript Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G65030.1)
Sequence

AAATAACCCGGCCCACTATCTTCTTCGTTCACATTACCTTAATTCTCTTCCTAGGGTTTA
ACATAAACCCCTTTTTTTCTCTCTCTCTCATCGCTGCGTAAAGCTATGAGTTTAATTGCA
GGTTCATACGAGAGATTCATTTGGGGATTCAAGTTGAGATCCCTCAAAAACGATCAGAAT
TACGAACTAACCCCTCTATTCTCCTTCCCTTCACATCTCTCACCAATTAAATGCACCGCC
GTCGCCGGTTCTGCCGCTGTATCCGGCGGCGCCGATGACACTATCAAAATCTATGACCTT
TCTACTTGCTCAGAAATTGGGTCACTACACCACTCCGCCACCGTTACTTCACTTTCCTTT
TTTACCCCTTCTTCATTCTCCTTCCCTCGTAACCTTATTGCCGCGTCTGAAGATGGTTCG
GTTTCCATATATGATGCTGATCCTTTTGTTCATCTCAAGACGGTTAAAGTGCATCGTAAG
GCAGTGAATTCTATATGCATTCATCCGTCGGGGAGGTTGGCATTGACTGTTGGAAGAGAT
GAATGTATGGCTATGGTTAATTTGGTTAGAGGAAGGAGAAGTTTTTATTGTAGGTTGGGA
AAAGAAGCTTCTTTAGTTAATTTTAGTGATGGTGGTGAAAAGTTTTTTATGGTTATGGAT
GATAAGATTTCTGTACATGAATCTGAAGATGCCAAAGCTATTCTAGAGCTTGACAGTAAG
AAGAGGGTGCTTTGTGCCACTTATGGGATGCATGGTATTTTGTTTACTGGGGGAGAGGAC
CGGAGTATTAAAGCTTGGGACATTACTAGTGGAAAACTTGCATATAGCATTGAAGATGCA
CATTCTACCCGTGTGAAAGGCATTGTTGTGCTACACAAAAACAGTGATGGTGATGCTGAA
GATCATCAACACATAGTAGCATCAGCATCATCAGATGGGGTCATACGTGTTTGGGATGTT
CGCATGACTAACAAAGATAAGCCAAATCCACTGGCTGAGGTCAATACAAAATCCAGGCTG
ACTTGTCTGGCTGGATCATCCATCAAATCTATGAAAAGACCACAGGTTGGAAATACTACT
TCAAATGGACAACAGCTCGACGCAGGTGAAGAATCATAGTGCTGTAATTTGGTAATGACA
ATCACATAGTGTATCTGCCATATTTTTCCTTTAGATTCCCCCTCCCCCTGAAGTTGTTGG
AATCATATCAATTTTGTTAGTTAAAAGTTGATCACTCGAAATCTATTTTGTAAGGCGTGT
GTATTATTTAATTAATGAATATGAGCAGTTATTTATTTTGGTTCTCATATCTCCCTAGTT
AAGGTCCCCTTCGTACACGGATGGGACTTCATTTTTTGGTATTTTACTATGGATATGAAT
GTGCCTCTCTTGGCTGACAGGTTTGGTAAAAAATCTAGTAGCTTGTAATTGACATTTTTG
TATTTCATATACAACACTCTTCTGATTCTTTCCTTTTAGTTTTGT