Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g078670.3.1
CDS Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	ATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGA TGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAA CCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATC ACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAGATTT GTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATC TCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGA AGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGCAAAATCT GAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAAGATTCACCTTCAACGC CACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCA ACCGTTGCAGGCTTTGAGATAGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTT GGTGCAGTACGTCTTAGGGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCAC ACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTA TCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGGATAGT TCTGACTCGAAGGATTCAACAAATTCAAATGGTGTCAAAGATGAGAATCTTCCTGCATCA GATCCATCAGCAAAAGTTCAGATGCAAATGCCATGGCAGAACCATATTCCTCCGTATATG TACAACTTTCATGGCCCAGCTCAACAGATGCCTTTTGCTGGCATGCATCCTTTACAATAT TATCCAGCACATATGCAGTGGCCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGG GACTCTCACAAACGCTCAAAGAAGAAGGAGAAATCCAAAGAACATAACAGTTCAGAAGAT GATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGATGAAGTTAGGAAG CATGAGAAAAAGCATTCTTCAAGGGAGAACTCACATGCTAAAAAGCACAAGAAGAAATCC TCAAAAAGAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAA AATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATGAAGATTCT ATCAAAGAGCAGGTAGATGATGCTGTTGCAATACTGGAGAAACGTCGTAATTCAAAGGGA CATAGGAACAAGAATAGAGGACATCAGAATCTTGATGTAGAGAATGAATCAAATGGTTAT AGCAACACGGACCTAAATGAGGGCGTGTCACCAAAGTTATCTGAGAAAGCAAAAGGAAAT AAGGCTTGGGATGCATTCCAGAATATTCTGATGAGTCGTGAGGAGCCAAGTATGAATGGG ACCAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGT GAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTATGAGCAAAAATCATGAA GATAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCAAGT TTGAAGAAAGGAGTTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCAGGA GGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAATAGT AATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGACTAGG CGAATGATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTCGAA AGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCAGCTTTTGAT GATCAATATGGTTCTCAGTGGAAAACAGACATTGGCATGGATGCAGACTTGGTTGCTGCA GCAAATGCTGAAAATAGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATATGGGACC AGTCAACCTGATGACCTCTGTGTGGTGCTGGCAAGAGAAACTAGTTTGGATCCTCTTGAG GCATCTTGGCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAA AAATCTTCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAAGGT AAAAGCACAACTAAGAAGGACAGTCTTGCAAAGACCGGAAAAGATGCAAGGTCTAAAGTC TCCCCAGGATCTCTGTCAAGGAGCAGGATTGATGCTTTAGCAAAGAGCAAGAAGATGTCT CCTCCTACTAACAAACTGACAACCCAGAAGAGCAAATTAGATCGGGACGAAGAAATGCGC AAGAGAATGGAAGAATTAGTGATCGAGAGGCAAAAGAGGATTGCAGAAAGAAGTGCAGCT AAGGGTTCGTCCCCAGCAGCTTCCAAGAAAGGGCCAGCAGGAAGTAAAACAGCTTCAAAG ATCTCACCTTCATCCAAACTTCACACATTTCCAGTGCAGGTCAAGCATTAA

Peptide Sequence

PEP ID	Solyc02g078670.3.1
PEP Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	MDSKTLLDYALFQLTPTRTRCDLVVFSGGKNEKLASGLVEPFISHLKFAKDQIPKGGYSI TMRPPSTHAYWFTKATFLRFVRFVSTPEILERFMRLEREISQIESSIQSNECSNGNSEEG SSPANSESTRKSNDSFKAKSEVEEANNAAPKENSKIHLQRHLDTRKALLRKEQAMAYARA TVAGFEIDQLDDLIQFANSFGAVRLRDACVDFKELYKQKHTDGQWMDEVAAMKACTPMDL SYLGNQGVILAYDNNGSLDSSDSKDSTNSNGVKDENLPASDPSAKVQMQMPWQNHIPPYM YNFHGPAQQMPFAGMHPLQYYPAHMQWPQNVNGSTNGSVRDSHKRSKKKEKSKEHNSSED DEQTESSASDSGTDSDEVRKHEKKHSSRENSHAKKHKKKSSKRVVIRNINYITSNRKNEE NDGSSYDSSSAESHLLDEDSIKEQVDDAVAILEKRRNSKGHRNKNRGHQNLDVENESNGY SNTDLNEGVSPKLSEKAKGNKAWDAFQNILMSREEPSMNGTSDQLPLDFQDEGYGIKNSG EKVRRDHLTPDDSLMSKNHEDNGTKVNMVDFANGEDMRPSLKKGVSEDVHLLFSHKEPSG GNTLGTPSDFGSESSAIRNSNGEDWFVVNHSGSSETQETRRMIFDNDSSMSTQKSSSQVE SERAAPIDDSFMVQSRPAFDDQYGSQWKTDIGMDADLVAAANAENSDPVASKTKLSTYGT SQPDDLCVVLARETSLDPLEASWQPELDFQIEASFIQVDKKSSAVEAKPPPTEETVPVKG KSTTKKDSLAKTGKDARSKVSPGSLSRSRIDALAKSKKMSPPTNKLTTQKSKLDRDEEMR KRMEELVIERQKRIAERSAAKGSSPAASKKGPAGSKTASKISPSSKLHTFPVQVKH*

Transcript Sequence

Transcript ID	Solyc02g078670.3.1
Transcript Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	TTCACAAGCTCAAATAATAATTAAAAAAAAATCTCTCCATGTGCAATTCTTGCCATTGCT TCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAA TGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTC ATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTC CAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGATGTGATCT TGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCAT TTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAG GCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAGATTTGTACGCTT TGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGAT CGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGAAGCTCACC AGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGCAAAATCTGAAGTTGA AGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAAGATTCACCTTCAACGCCACCTGGA TACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGC AGGCTTTGAGATAGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTTGGTGCAGT ACGTCTTAGGGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCACACAGATGG ACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTATCGTACTT GGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGGATAGTTCTGACTC GAAGGATTCAACAAATTCAAATGGTGTCAAAGATGAGAATCTTCCTGCATCAGATCCATC AGCAAAAGTTCAGATGCAAATGCCATGGCAGAACCATATTCCTCCGTATATGTACAACTT TCATGGCCCAGCTCAACAGATGCCTTTTGCTGGCATGCATCCTTTACAATATTATCCAGC ACATATGCAGTGGCCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGGGACTCTCA CAAACGCTCAAAGAAGAAGGAGAAATCCAAAGAACATAACAGTTCAGAAGATGATGAACA GACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGATGAAGTTAGGAAGCATGAGAA AAAGCATTCTTCAAGGGAGAACTCACATGCTAAAAAGCACAAGAAGAAATCCTCAAAAAG AGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAAAATGATGG ATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATGAAGATTCTATCAAAGA GCAGGTAGATGATGCTGTTGCAATACTGGAGAAACGTCGTAATTCAAAGGGACATAGGAA CAAGAATAGAGGACATCAGAATCTTGATGTAGAGAATGAATCAAATGGTTATAGCAACAC GGACCTAAATGAGGGCGTGTCACCAAAGTTATCTGAGAAAGCAAAAGGAAATAAGGCTTG GGATGCATTCCAGAATATTCTGATGAGTCGTGAGGAGCCAAGTATGAATGGGACCAGTGA CCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGTGAGAAGGT CAGAAGAGACCATCTGACACCTGATGATTCTCTTATGAGCAAAAATCATGAAGATAATGG CACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCAAGTTTGAAGAA AGGAGTTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCAGGAGGCAATAC ATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAATAGTAATGGGGA AGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGACTAGGCGAATGAT ATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTCGAAAGTGAAAG AGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCAGCTTTTGATGATCAATA TGGTTCTCAGTGGAAAACAGACATTGGCATGGATGCAGACTTGGTTGCTGCAGCAAATGC TGAAAATAGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATATGGGACCAGTCAACC TGATGACCTCTGTGTGGTGCTGGCAAGAGAAACTAGTTTGGATCCTCTTGAGGCATCTTG GCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAAAAATCTTC TGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAAGGTAAAAGCAC AACTAAGAAGGACAGTCTTGCAAAGACCGGAAAAGATGCAAGGTCTAAAGTCTCCCCAGG ATCTCTGTCAAGGAGCAGGATTGATGCTTTAGCAAAGAGCAAGAAGATGTCTCCTCCTAC TAACAAACTGACAACCCAGAAGAGCAAATTAGATCGGGACGAAGAAATGCGCAAGAGAAT GGAAGAATTAGTGATCGAGAGGCAAAAGAGGATTGCAGAAAGAAGTGCAGCTAAGGGTTC GTCCCCAGCAGCTTCCAAGAAAGGGCCAGCAGGAAGTAAAACAGCTTCAAAGATCTCACC TTCATCCAAACTTCACACATTTCCAGTGCAGGTCAAGCATTAAGGAGCAATCCATCAAGG AAAAGTATGATCCGACCTTAAAATATATTTGATTGCTTTGCCGCGAATATGGAACATCCA CAATTCACTGCTTTGTGCACATTGGATTATCCACAAATATATCTTGGAGAAATAAAATAT TTTCGATGAAAATTATAGATTTTTTTCTTTACTAGGACAGCTCTGCTTGCTGGCTTGATG CAAGTTATTCCTTCTCATTTATTTAGACATTCATGTCCCATCATAAGGTTTTGCCAGTAT AGTTGCTTGAGGCTTTATTATTATTTGTATATTGCTATTTGTTCATATGTTGTGTAAAGT TATATTTAAATCTACCTGTGAGTTAAAACTTCTAATACCAAATCTTGTTTTTTTTTGCTG GATAAGTGAAGATAGGATTTTGGTACTATGGACATTTGTCTTCCCATATTTATTGTTGAT TCACATAAGTTTTGTATAATCCTCACATTTTACCAGCTATGTTAAATCAGTCACTTTTAT TGTTGTT