Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g078660.3.1
CDS Infomation	Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 - AT1G61080.6)
Sequence	ATGTGGACAGGCAATGATGAGTGGATGGTCAAATGCAAGGACGATTCATTCAGTAAACAA GACAATTTGGAACACTATGGAGTGTTGTTGCTCGATGACATGATTCAGCTAGCCAGTGAA AGGATGTTCGATATGATGGATGAGGATGAGGATGAGGATGAAGACGAGGATGAGGATGAC CAGATAAGATATGAACGTCCATCATTCAACATGTTTGGGAGGGTTCTTTCTGAATCTTAC TCAAGTTCCAAGTCCTCCCTCTCGAGCACTCCAGTGACCCCAACTTCAGTTCTCCCTGAG TTAAGGAGCAAGAAGAATACAAAGGCATCATACTCTCCACCTCGTCTTCTGCCACTCAGG GTTCAAGCAGTTGGCAAGCTGAATCCTATTGATGTAAAGCGTCTCTCTTTTCATATGTTT CCAAATGTAGCAGCTCAAGATTCAAATTTTGTTGTTCAATTAACAAGCACAGTTAATGAA CAAAAGTCAGATGTAGAAGCGGAGAAAGATTCTCAAGTGAAAACCAAAGATGATGAGGAG TTTGGACAAGATTGTGAAATGACAGACTCACCAGATATTCTACCGACTAGTATGGATGCT CAACCAGAAAATGAAGGAACATGTAAAACTGGTGTCAAAAATAATCTACCAGTGTCAGGA CATGTTACCTTGGATGTGCTTTTACCTCCTTCACTTCCAGAACAAGGAGCAGGGCAACAA TCACCACTCACTTTGTCGTTGAATGTCATAGACTCGCAAAAACCAACATCTACTCTGCAA ATTTCTTTACTCACACCAGATGGAGATATATCATTGAACCAACCATCGACTTTTGCACCA GCAGCACCACAACCACCACCCCCACCTCCACCAGTACCCAATTCATCAGGGAATGCAGAA GGGTCAAGGCCTGCTCCATTGTTAGCAAAACCAAGTGGTGTTCCACAGCCTCCTCCTCCT CCTCCTCCACCTCCCATGGCATCAGCCAATGTAGCAACACCACAACATCCTATGAAACCA ATATCTGCACTCCCACCACCACCACCACCACCTCCTCCCATGACAAGAAAAGAAATAACA TGTCCACCTCCAGCTCCACCACCTCCCATGACATCAGGACAAAGAGTGGCACCACCCCCG CCCCCACCACCTCCCATGACTTCAGTAAAAGCAGTGACACCTCCCCCACCCCCACCACCT CCCATGACATCAGGAAAAGAAGTGGCACCTCCTCCACCCCCACCACCTCCCATGACATCG GGAAATGTTAAATCAGTTCCACCTCCACCCCCACCTCCCATGGGATCAAAGTTTACTGCC CCTCCTCCACCCCCTCCGCCCATGGGATCAAAGGGTATGGCACCTGCACCCCCACCTCCA CCAATGACTTCAAACGGAAGAATGCCAGCACCACCTCCACCCATGCCAATGGGAAAAGGA GGTGCACCTCCTTCACCACCAGGGTTTGCAGGTGCCAGGAGCCTAGGACCTAGGAAAGGA GCCACTAAATTGAAGAGATCATCACAAATGGGAAATCTATATCGACTTCTCAAGGGAAAA GTTGAAGGATCTAGTTTAGATGGTAAATCAAAGGGGAGAAAGGGAAAAGCTAGTGCTAGT GCACCAGCAGGAGGTAAGCAAGGAATGGCTGATGCATTAGCAGAGATGACAAAGAGGTCA GCATACCACCAACAAATCGAGGAGGATGTTAAAGTACATGCACAAACAATTAAGGAGATG AAAACAGCGATTTCCTCTTTCCAAACATCAGACATGTCTGAGCTAATCAAGTTCCACAAA ACTGTAGAATCCAACCTAGAAAAACTAACGGATGAATCTCAGGTGCTAGCAAGGTTTGAA GAATTTCCGACCAAGAAGTTGGAAGCATTGAGGATGGCCGCGGCACTTCACACCAAGTTA GATACAATAGCCAAAACTCTACAGAATTGGCCACTAGTACCACCTGTTGGACAACTTCTT GACAAAGCTGAGAATTACTTCAACAAGATCAAAGGAGAAATGGACACATTGGAGCGGACA AAAGATGACGAATCCAAGAAATTTACAAGCCATAAAATCCACTTTGATTTCGGCATTCTT GTGCGTATCAAAGAATTGATGGTGGATGTTTCCTCCAACTGTATGGAGCTGACTTTGAAG GAGCGGAGAGAAGCAAAGCAAAAGGAAAATGAAGGACCTACACCGAAAAATGATGGTAAA AAGGGATCAGCTAAACTTCTATGGAAGGCCTTCCAATTTGCATTCAGAGTCTATACTTTT GCTGGTGGGCAAGATGATCGTGCTGACATGTTGACAAAGGAATTGGCTCAAGAAATTGAG ACAGATCCTAATCCAGAGACATAA

Peptide Sequence

PEP ID	Solyc02g078660.3.1
PEP Infomation	Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 - AT1G61080.6)
Sequence	MWTGNDEWMVKCKDDSFSKQDNLEHYGVLLLDDMIQLASERMFDMMDEDEDEDEDEDEDD QIRYERPSFNMFGRVLSESYSSSKSSLSSTPVTPTSVLPELRSKKNTKASYSPPRLLPLR VQAVGKLNPIDVKRLSFHMFPNVAAQDSNFVVQLTSTVNEQKSDVEAEKDSQVKTKDDEE FGQDCEMTDSPDILPTSMDAQPENEGTCKTGVKNNLPVSGHVTLDVLLPPSLPEQGAGQQ SPLTLSLNVIDSQKPTSTLQISLLTPDGDISLNQPSTFAPAAPQPPPPPPPVPNSSGNAE GSRPAPLLAKPSGVPQPPPPPPPPPMASANVATPQHPMKPISALPPPPPPPPPMTRKEIT CPPPAPPPPMTSGQRVAPPPPPPPPMTSVKAVTPPPPPPPPMTSGKEVAPPPPPPPPMTS GNVKSVPPPPPPPMGSKFTAPPPPPPPMGSKGMAPAPPPPPMTSNGRMPAPPPPMPMGKG GAPPSPPGFAGARSLGPRKGATKLKRSSQMGNLYRLLKGKVEGSSLDGKSKGRKGKASAS APAGGKQGMADALAEMTKRSAYHQQIEEDVKVHAQTIKEMKTAISSFQTSDMSELIKFHK TVESNLEKLTDESQVLARFEEFPTKKLEALRMAAALHTKLDTIAKTLQNWPLVPPVGQLL DKAENYFNKIKGEMDTLERTKDDESKKFTSHKIHFDFGILVRIKELMVDVSSNCMELTLK ERREAKQKENEGPTPKNDGKKGSAKLLWKAFQFAFRVYTFAGGQDDRADMLTKELAQEIE TDPNPET*

Transcript Sequence

Transcript ID	Solyc02g078660.3.1
Transcript Infomation	Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 - AT1G61080.6)
Sequence	ATGTGGACAGGCAATGATGAGTGGATGGTCAAATGCAAGGACGATTCATTCAGTAAACAA GACAATTTGGAACACTATGGAGTGTTGTTGCTCGATGACATGATTCAGCTAGCCAGTGAA AGGATGTTCGATATGATGGATGAGGATGAGGATGAGGATGAAGACGAGGATGAGGATGAC CAGATAAGATATGAACGTCCATCATTCAACATGTTTGGGAGGGTTCTTTCTGAATCTTAC TCAAGTTCCAAGTCCTCCCTCTCGAGCACTCCAGTGACCCCAACTTCAGTTCTCCCTGAG TTAAGGAGCAAGAAGAATACAAAGGCATCATACTCTCCACCTCGTCTTCTGCCACTCAGG GTTCAAGCAGTTGGCAAGCTGAATCCTATTGATGTAAAGCGTCTCTCTTTTCATATGTTT CCAAATGTAGCAGCTCAAGATTCAAATTTTGTTGTTCAATTAACAAGCACAGTTAATGAA CAAAAGTCAGATGTAGAAGCGGAGAAAGATTCTCAAGTGAAAACCAAAGATGATGAGGAG TTTGGACAAGATTGTGAAATGACAGACTCACCAGATATTCTACCGACTAGTATGGATGCT CAACCAGAAAATGAAGGAACATGTAAAACTGGTGTCAAAAATAATCTACCAGTGTCAGGA CATGTTACCTTGGATGTGCTTTTACCTCCTTCACTTCCAGAACAAGGAGCAGGGCAACAA TCACCACTCACTTTGTCGTTGAATGTCATAGACTCGCAAAAACCAACATCTACTCTGCAA ATTTCTTTACTCACACCAGATGGAGATATATCATTGAACCAACCATCGACTTTTGCACCA GCAGCACCACAACCACCACCCCCACCTCCACCAGTACCCAATTCATCAGGGAATGCAGAA GGGTCAAGGCCTGCTCCATTGTTAGCAAAACCAAGTGGTGTTCCACAGCCTCCTCCTCCT CCTCCTCCACCTCCCATGGCATCAGCCAATGTAGCAACACCACAACATCCTATGAAACCA ATATCTGCACTCCCACCACCACCACCACCACCTCCTCCCATGACAAGAAAAGAAATAACA TGTCCACCTCCAGCTCCACCACCTCCCATGACATCAGGACAAAGAGTGGCACCACCCCCG CCCCCACCACCTCCCATGACTTCAGTAAAAGCAGTGACACCTCCCCCACCCCCACCACCT CCCATGACATCAGGAAAAGAAGTGGCACCTCCTCCACCCCCACCACCTCCCATGACATCG GGAAATGTTAAATCAGTTCCACCTCCACCCCCACCTCCCATGGGATCAAAGTTTACTGCC CCTCCTCCACCCCCTCCGCCCATGGGATCAAAGGGTATGGCACCTGCACCCCCACCTCCA CCAATGACTTCAAACGGAAGAATGCCAGCACCACCTCCACCCATGCCAATGGGAAAAGGA GGTGCACCTCCTTCACCACCAGGGTTTGCAGGTGCCAGGAGCCTAGGACCTAGGAAAGGA GCCACTAAATTGAAGAGATCATCACAAATGGGAAATCTATATCGACTTCTCAAGGGAAAA GTTGAAGGATCTAGTTTAGATGGTAAATCAAAGGGGAGAAAGGGAAAAGCTAGTGCTAGT GCACCAGCAGGAGGTAAGCAAGGAATGGCTGATGCATTAGCAGAGATGACAAAGAGGTCA GCATACCACCAACAAATCGAGGAGGATGTTAAAGTACATGCACAAACAATTAAGGAGATG AAAACAGCGATTTCCTCTTTCCAAACATCAGACATGTCTGAGCTAATCAAGTTCCACAAA ACTGTAGAATCCAACCTAGAAAAACTAACGGATGAATCTCAGGTGCTAGCAAGGTTTGAA GAATTTCCGACCAAGAAGTTGGAAGCATTGAGGATGGCCGCGGCACTTCACACCAAGTTA GATACAATAGCCAAAACTCTACAGAATTGGCCACTAGTACCACCTGTTGGACAACTTCTT GACAAAGCTGAGAATTACTTCAACAAGATCAAAGGAGAAATGGACACATTGGAGCGGACA AAAGATGACGAATCCAAGAAATTTACAAGCCATAAAATCCACTTTGATTTCGGCATTCTT GTGCGTATCAAAGAATTGATGGTGGATGTTTCCTCCAACTGTATGGAGCTGACTTTGAAG GAGCGGAGAGAAGCAAAGCAAAAGGAAAATGAAGGACCTACACCGAAAAATGATGGTAAA AAGGGATCAGCTAAACTTCTATGGAAGGCCTTCCAATTTGCATTCAGAGTCTATACTTTT GCTGGTGGGCAAGATGATCGTGCTGACATGTTGACAAAGGAATTGGCTCAAGAAATTGAG ACAGATCCTAATCCAGAGACATAAAGTTTATAGTCATTTTTTCCACAAAAACCAAAAAAA AAAAAAAAAGATCACTATAGGTGTCAATATATAACGGCATTAATGCACATAGACGCTTTT AAGAGGTTTGAGCAATTAGTATAATGATGATTTCCCTAGCAGGTGTTCTATAGATGTTTC TTGAGCTGTGATTTCATGCACATTATATCCTTTTTTGTCTGAGGGACGGAGAGAAGTGAG CTAAACTCTAGCTTAGCTCTACCACCTGCAATACATACAATATTTATATTACACCTTTGT GACTGGTTTTGTAGAATGTATATATATAACTTTTGTCTCTACTCTCAGAATTTAAAAGTA TACGCATGAATGACTATGTTCTTATGTATATAGTCCATGCTTCTGCATTTTGTAATAATG TCATACATCATTATTACTTACAAATCATCTGTTCTGCAAAATGATTAGTAGGAAGAATTA CATGGTATTAAGAATGTTGTTTCTCATCTAACACATTATTGATCTCTTTCAATTTTCCAA TCCTTAAATATTGATTACTTTTTAACATCCATGTACAAGCAGAAATACATTATACAGAGT AACTACGCCTTCAAACTTTTAACTCTTGAATCCGTCTCTGTGACTGTATATATATATAGT ACACAAGCAGAAGAGTTGAATTCCCTGTGTGTGAGACTGTGATCATATATATTACATAAG CAGAAGAATCAATATTTTAACGACAAATATAAGAGATTAATTATAAGCTACTACCATGGA TGCAAATTAGAAATCAGAATGCAACTAACTAACTTCATCAAAATGCTCTTTAAAGCATAA AGACAAACACCTGGTGGGCTTCTTCATTGGAAATCACATTCTTACTGGTGCTACTAAGGT GGTTATTTAAAGGGC