Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g078580.1.1
CDS Infomation	RNA polymerase-associated protein RTF1 like (AHRD V3.3 *** A0A0B2PDF2_GLYSO)
Sequence	ATGGAAGAAGAGTTAACTGATTTACTGTTGGAGGCTGCTGGTAGAACAAATACTGGTGGA AGGAATCGTCCACCTCATTCATCTAAAAGACATCACAAGAGTTCATATTCTGATGATGGA AGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCT GGTTCACAAGTTCCTCTCAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGC AGCCATGGAGAAGGCAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATT GGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTG GAAAGGGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCATGAC AAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGCTCACCTCCTTCACATTCTCGT GGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAAT GAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCCGAGGGTCAATTCAAGCTGAGG GATGCAGCTAGAAAAGGTTCTGGAAGCAGGGGCTATTCACCTATCAAACGTAGAAGTTTT ACAGCTGCATCTCTAGGTAGCAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAG GGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAG TCACAGTTGCCAACATTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCA AAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTTGTAAGAGTTGGC ATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATGCT TCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTT GTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGATTTCAGACTCTCCT CCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATG CCTAGTAAGCAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTT TACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCA CTTAATGTTGCTGCTGAGAAGGATCGTTTGAGAAGGGATATGGAAGTGGCCAAAATGAAG AATGACGAAGCAGAAGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGAGGATAGCAGG AAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTGGCTGAGATGAACCGGAAGAATAGG GTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGT GAGGCTGGGTATGATCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAA GGTGCATCCAATGGTGAAGCTGCTGCAGCAGCAGCATTGGCAGCTGAAGATAACAATGGG GCTGGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCAGCAGCCTTGCAGGCTGCAGCA GGCGCTGGGAAGTTGGTGGACACAAATGCTCCTGTAGATCAAGGAACAGAATCAAATACG CTACATGATTTCGATCTGCCTATCTCGTTGGCTGTGCTTCAGAAGTTTGGAGGGTCTCAA GGAGGCCAAGCAGGATTTATGGCTCGCAAACAGAGGATAGAAGCAACTGTTGGATGTAGC GTTCCGGAGAACGATGGCAGAAGACATGCACTAACTTTAAGTGTTAGTGACTACAAGAGA AGGAGAGGACTCCTTTGA

Peptide Sequence

PEP ID	Solyc02g078580.1.1
PEP Infomation	RNA polymerase-associated protein RTF1 like (AHRD V3.3 *** A0A0B2PDF2_GLYSO)
Sequence	MEEELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS GSQVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTEL EREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALN EIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNE GDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVG IGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSP PLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRP LNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNR VENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAAAALAAEDNNG AGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL*

Transcript Sequence

Transcript ID	Solyc02g078580.1.1
Transcript Infomation	RNA polymerase-associated protein RTF1 like (AHRD V3.3 *** A0A0B2PDF2_GLYSO)
Sequence	ATGGAAGAAGAGTTAACTGATTTACTGTTGGAGGCTGCTGGTAGAACAAATACTGGTGGA AGGAATCGTCCACCTCATTCATCTAAAAGACATCACAAGAGTTCATATTCTGATGATGGA AGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCT GGTTCACAAGTTCCTCTCAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGC AGCCATGGAGAAGGCAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATT GGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTG GAAAGGGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCATGAC AAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGCTCACCTCCTTCACATTCTCGT GGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAAT GAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCCGAGGGTCAATTCAAGCTGAGG GATGCAGCTAGAAAAGGTTCTGGAAGCAGGGGCTATTCACCTATCAAACGTAGAAGTTTT ACAGCTGCATCTCTAGGTAGCAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAG GGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAG TCACAGTTGCCAACATTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCA AAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTTGTAAGAGTTGGC ATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATGCT TCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTT GTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGATTTCAGACTCTCCT CCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATG CCTAGTAAGCAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTT TACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCA CTTAATGTTGCTGCTGAGAAGGATCGTTTGAGAAGGGATATGGAAGTGGCCAAAATGAAG AATGACGAAGCAGAAGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGAGGATAGCAGG AAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTGGCTGAGATGAACCGGAAGAATAGG GTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGT GAGGCTGGGTATGATCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAA GGTGCATCCAATGGTGAAGCTGCTGCAGCAGCAGCATTGGCAGCTGAAGATAACAATGGG GCTGGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCAGCAGCCTTGCAGGCTGCAGCA GGCGCTGGGAAGTTGGTGGACACAAATGCTCCTGTAGATCAAGGAACAGAATCAAATACG CTACATGATTTCGATCTGCCTATCTCGTTGGCTGTGCTTCAGAAGTTTGGAGGGTCTCAA GGAGGCCAAGCAGGATTTATGGCTCGCAAACAGAGGATAGAAGCAACTGTTGGATGTAGC GTTCCGGAGAACGATGGCAGAAGACATGCACTAACTTTAAGTGTTAGTGACTACAAGAGA AGGAGAGGACTCCTTTGA