Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g078480.3.1
CDS Infomation

CBS domain-containing protein (AHRD V3.3 *** A0A061GEK1_THECC)
Sequence

ATGGCAGTAAGTTTTTTGAATCGGGAGGTATCTGACCTGTGTCTTGGTAAGCCGGCGTTA
AAGCCTATTCCAGCTGAAGCTACTGTATCGGAGGCGTTGACATTGTTGAAAAAATCCGGC
GAGACTCATGTAAGCGTTTGGAGCTGTGACCATATCAGGAAGGTTGTAGAAGAAGAAGAA
GGAGGCGGAGGATATTCTGTTTGCCGCTGTATTGGGAAGATCTGTATGGTAGATGTGATT
TGCTTCCTCTGTACGGAAGAGAATTTGGCGGATCCTTCTAAGGCTCTTCAAACTCCTGTG
GAACAGATTTTGCCTAAAGGGAATTCCATTGTCAGACATTTAGATCCAAATTCTAGCTTG
TTGGAAGCGATAGATTACATTCTTGAAGGCGCTCAGAATCTGGTTATACCAATTCAAAAT
TCTAAGAGCACCCCTTCGAGGAAAAAGCTTTCGAGTAAAGCGTCATTTTTGACTCCCACA
AATCATAACGGAGTTGAATACTGTTGGCTAACGCAGGAAGACATTGTCCGGTTCCTTCTG
AACTCCATTGGAGTCTTCTCTCCCATGCCTACTTTTTCAATTGAATCGCTCAACATCATA
AATCACGATATGATGACTGTTAGTTATCATGATCCTGCAATTTCTTCTTTGGATGCCATA
ATTCGGGCGTATATTGAGCAGAGCTCAGTTGCAGTTGTTGATGAAGACAACCGATTGATT
GGTGAAATCTCTCCCTTCACTCTAGCCTACTGTGATGAGACCGTTGCAGCAGCAATCGCG
ACACTTTCAGCTGGTGATCTCATGACTTACATCGACTACGGTGGTCCTCCAGAGGACTTG
ATCGAGTTGGTCAAGATGAGGTTACAAGAAAAGAAACTTGGGGCAATGGTTGAACTAATA
GATGAAGAGTTTTCACTGTCTTCATCATCATCTTCTGCTTCAAGCTGTTCATCAGATGAT
GAATCAGGCTCAAGCAAAGTTACTGTGCTAGGACGATATTCTTCAGCAAGAAGATCCGAG
GCGATTACTTGTTATCCATGGAGTTCATTGGTGGCTGTGATGATCCAAGCTCTAGCACAT
CGCGCTAATTCCATTTGGGTGATGGATGAAGATCACAATTTGATCGGAGTTGTAACATTT
AAAGGAATTCTGGAAGTTTTCAGGAGTATCGCTAATGCGAAGCGTAAACCAGAAAGGGAG
AATACATCAAAGCAATAA

Peptide Sequence

PEP ID

Solyc02g078480.3.1
PEP Infomation

CBS domain-containing protein (AHRD V3.3 *** A0A061GEK1_THECC)
Sequence

MAVSFLNREVSDLCLGKPALKPIPAEATVSEALTLLKKSGETHVSVWSCDHIRKVVEEEE
GGGGYSVCRCIGKICMVDVICFLCTEENLADPSKALQTPVEQILPKGNSIVRHLDPNSSL
LEAIDYILEGAQNLVIPIQNSKSTPSRKKLSSKASFLTPTNHNGVEYCWLTQEDIVRFLL
NSIGVFSPMPTFSIESLNIINHDMMTVSYHDPAISSLDAIIRAYIEQSSVAVVDEDNRLI
GEISPFTLAYCDETVAAAIATLSAGDLMTYIDYGGPPEDLIELVKMRLQEKKLGAMVELI
DEEFSLSSSSSSASSCSSDDESGSSKVTVLGRYSSARRSEAITCYPWSSLVAVMIQALAH
RANSIWVMDEDHNLIGVVTFKGILEVFRSIANAKRKPERENTSKQ*

Transcript Sequence

Transcript ID

Solyc02g078480.3.1
Transcript Infomation

CBS domain-containing protein (AHRD V3.3 *** A0A061GEK1_THECC)
Sequence

TTTTTTCCTAATATTCAGCTTAGAATTCACATATCTAACCTATCACCACCGACTAAGTCT
TCCGTTGTATTTTCCTGTTAAAGAATTTTCCGGCCGATCTCTTTCTCTATTTTATATCGG
ATTTTTTTCTTTCTCTATATTATATCGGTATTCTTTCTGTTGAATATTCGCATTTGCATG
GCAGTAAGTTTTTTGAATCGGGAGGTATCTGACCTGTGTCTTGGTAAGCCGGCGTTAAAG
CCTATTCCAGCTGAAGCTACTGTATCGGAGGCGTTGACATTGTTGAAAAAATCCGGCGAG
ACTCATGTAAGCGTTTGGAGCTGTGACCATATCAGGAAGGTTGTAGAAGAAGAAGAAGGA
GGCGGAGGATATTCTGTTTGCCGCTGTATTGGGAAGATCTGTATGGTAGATGTGATTTGC
TTCCTCTGTACGGAAGAGAATTTGGCGGATCCTTCTAAGGCTCTTCAAACTCCTGTGGAA
CAGATTTTGCCTAAAGGGAATTCCATTGTCAGACATTTAGATCCAAATTCTAGCTTGTTG
GAAGCGATAGATTACATTCTTGAAGGCGCTCAGAATCTGGTTATACCAATTCAAAATTCT
AAGAGCACCCCTTCGAGGAAAAAGCTTTCGAGTAAAGCGTCATTTTTGACTCCCACAAAT
CATAACGGAGTTGAATACTGTTGGCTAACGCAGGAAGACATTGTCCGGTTCCTTCTGAAC
TCCATTGGAGTCTTCTCTCCCATGCCTACTTTTTCAATTGAATCGCTCAACATCATAAAT
CACGATATGATGACTGTTAGTTATCATGATCCTGCAATTTCTTCTTTGGATGCCATAATT
CGGGCGTATATTGAGCAGAGCTCAGTTGCAGTTGTTGATGAAGACAACCGATTGATTGGT
GAAATCTCTCCCTTCACTCTAGCCTACTGTGATGAGACCGTTGCAGCAGCAATCGCGACA
CTTTCAGCTGGTGATCTCATGACTTACATCGACTACGGTGGTCCTCCAGAGGACTTGATC
GAGTTGGTCAAGATGAGGTTACAAGAAAAGAAACTTGGGGCAATGGTTGAACTAATAGAT
GAAGAGTTTTCACTGTCTTCATCATCATCTTCTGCTTCAAGCTGTTCATCAGATGATGAA
TCAGGCTCAAGCAAAGTTACTGTGCTAGGACGATATTCTTCAGCAAGAAGATCCGAGGCG
ATTACTTGTTATCCATGGAGTTCATTGGTGGCTGTGATGATCCAAGCTCTAGCACATCGC
GCTAATTCCATTTGGGTGATGGATGAAGATCACAATTTGATCGGAGTTGTAACATTTAAA
GGAATTCTGGAAGTTTTCAGGAGTATCGCTAATGCGAAGCGTAAACCAGAAAGGGAGAAT
ACATCAAAGCAATAA