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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g078390.3.1
CDS Infomation

DNA mismatch repair protein MutS2 (AHRD V3.3 *** G7ZZ93_MEDTR)
Sequence

ATGAATCTTTTCAACTTCAACTGCAAATGCAAATCCAACAATTTCTTCAGCATTCATCTT
CCTCCGCCTCACAGCTCGCTCTGTAACCGTCGTACAACTAGGTTCTCCGTCCGTTTCTCA
TCCGAGTCAACTCACAGAGTCAAACTCGCCGAGTCACTGCAATCCGAAACCTTGAAGCTT
CTAGAATGGCCCGCCGTGTGTCAACAGCTCTCCGCTTTCACGTCCACATCCATGGGATAC
GCCGCAGCACAATCTGCTCGGATTCCGGTGGGTAAAACTCGTGAAGAGAGCAGTAGACTT
CTCTCTCAGACCTCGGCCGCGGTGGCTGTACCTCGGCCGTTGGATTTTACCGGAATTGAA
GATATTTCCCCAATTGTTGATGCTTCCGTTGCAGGCGGTGTACTCTCGATTCGTGAACTT
TGCTCTGTGAAACGAACCTTGGCAGCGGCGAGATTTTTGCTCCAACAGTTGGAGGAGATT
GATTTTTCTGAAAGGTACTCTTCTCTGAAGGAAATTCTTCACAGTTGTGATTTTCTTGTG
GAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGTAATCCTTGATAGA
GCTAGTGAAGATTTGGAAATTATAAGATCCGAGAGAAAGAGGAACATGGATAATCTAGAA
TTATTGTTGAAGCAATTATCAACTCAAGTTTTTCAAGGTGGAGGATTTGACAGGCCTTTA
GTGACCAAGCGCCGTTCAAGATTGTGTGTTGCTGTGAGAGCTTCACATAGATCTTTGCTT
CCTAATTCCGTAATCCTAGATACAAGCAGTAGTGGATCTACATACTTCATGGAACCTAAA
GAGGCAGTTGAGCTAAACAACATGGAAGTTAAACTTTCTAGTTCTGAGAAGGTTGAGGAG
CAAACAATTTTGAGTTTGCTTACATCTGAAATAGCAGAATCTAATATGAAAATAAAGCAC
TTATTAGATAAAATATTGGAAATCGATCTTGCATTTGCAAGGGCTGCTCATGCTCAGTGG
ATGGGTGCTGCCTGTCCAGCTTTAAGTCCAAGAAATTGCAACATATCCCAATCTGAACAT
TTATCTATAAATGTAGAAGGGATACAACATCCTTTGCTTCTTGAATCCTCCTTGGAAAAC
TTGTCGACTGATGTGTCCCCAAGATCACCTGATTTGGATCAAGGAAATGGTGTCGTGAAT
TTCGAGACAAAATCTCATGCACATTTCCCTGTGCCCATTGATATTAAAATTGGTCATGGA
ACAAAGGTTGTTGTCATCTCGGGCCCAAATACCGGAGGCAAAACGGCTTCAATGAAGACT
CTAGGACTGGCTTCTATGATGTTGAAGGCTGGCATGTATTTGCCTGCCCAAAATAAACCA
CAGCTTCCATGGTTTGACCTTATTCTGGCAGACATTGGGGACCAACAGTCTCTGGAGCAA
AGTCTATCAACCTTTAGTGGGCACATTTCACGGCTTCGTGAGATTCTAGAAGTTGCTTCT
GGAGAATCTCTAGTTCTTATTGATGAAATTGGAAGTGGGACCGATCCTTCAGAAGGTGTA
GCACTTTCAGAAAGCATACTGCAATATCTCAAGGACAGGGTTAATTTAGCTGTTGTAACT
ACCCACTATGCGGATTTAACTCGCTTAAAAGAAAAGGACAATCGGTTTGAAACAGCAGCA
ACAGAGTTTTCCTTGGAGACTCTACAGCCTACCTATCGGATTCTATGGGGAAGCATGGGT
GAATCAAATGCCTTGAATATTGCAAAATCAATGGGCTTTGATGAAAGAATAATTGAGCGA
GCAGTATTATGGGTGAACAAATTGAGACCAGACAAGCAGCAGGAGCAGAAGGGTTTACTT
TATCGGTCACTAATTGAAGAAAGAGATAGACTAGAATCTCAAGCAATGGAAGCTGCTTCT
CTTCATTCAGATATTATGAATATTTATAATGAGATTAACAATGAAACACAAGACCTTGAT
GGACGTGAAGCTGCCCTCATAGCAAAGGAAACACATGAAATACAACAGGAAGTGAGAGCT
GTGAAAAATGAGATCCAAACTATAGTACAGCGGTTTGAGAGCCAACTCGGAAATGTAAGT
GTTGACGAGATTAATACACTTGTAAAAAAAGCGGAAGCTGCTATTGCATCGATAGTTGAA
GCTCATCAGCCTAGTAAAGATTTTCTTGTCAGAGAAATAGGCCAGAGCCTTTACACACCA
CAGGTTGGTGAACAAGTATATGTGAAGGCGTTTGGAAATAAGTTGGCCACTGTGGTTGAG
GAACCTGGGGATGATGACACTATCCTTGTTCAATATGGAAAAATCAAAGTCCGCGTGGAC
AAGAGCAGTATAAGACCCATTCCCCCTGATGCTTCCTCCAGTGCAGCTAACTTGAAAACC
CAGGTTCAGCAGATCAGGAGTCTCAGGGACCTTGGAAGTCTCTCTGAAGCAAGCAAAAAT
CAGCAGGATTCTTATGGCCCTGTGCTGCAGACATCTAAAAACACCGTAGATTTACGTGGC
CTGAGAGTGGAGGATGCTTCTCATCAGCTCAAAATAGCCATTGATTCAAGAGCGCCTAAT
TCTGTTATTTTTGTTATTCATGGGATGGGCACTGGAGTCGTAAAAGAATCTGCACTTAAA
TTACTAAAAGATCATCCTCGTGTTGTTAAGTTTGAACCGGAAAGTCCTATGAATTATGGC
TGTACAGTTGCTTATATCAAATGA

Peptide Sequence

PEP ID

Solyc02g078390.3.1
PEP Infomation

DNA mismatch repair protein MutS2 (AHRD V3.3 *** G7ZZ93_MEDTR)
Sequence

MNLFNFNCKCKSNNFFSIHLPPPHSSLCNRRTTRFSVRFSSESTHRVKLAESLQSETLKL
LEWPAVCQQLSAFTSTSMGYAAAQSARIPVGKTREESSRLLSQTSAAVAVPRPLDFTGIE
DISPIVDASVAGGVLSIRELCSVKRTLAAARFLLQQLEEIDFSERYSSLKEILHSCDFLV
ELEQKIEFCIDCSFSVILDRASEDLEIIRSERKRNMDNLELLLKQLSTQVFQGGGFDRPL
VTKRRSRLCVAVRASHRSLLPNSVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSEKVEE
QTILSLLTSEIAESNMKIKHLLDKILEIDLAFARAAHAQWMGAACPALSPRNCNISQSEH
LSINVEGIQHPLLLESSLENLSTDVSPRSPDLDQGNGVVNFETKSHAHFPVPIDIKIGHG
TKVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNKPQLPWFDLILADIGDQQSLEQ
SLSTFSGHISRLREILEVASGESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVVT
THYADLTRLKEKDNRFETAATEFSLETLQPTYRILWGSMGESNALNIAKSMGFDERIIER
AVLWVNKLRPDKQQEQKGLLYRSLIEERDRLESQAMEAASLHSDIMNIYNEINNETQDLD
GREAALIAKETHEIQQEVRAVKNEIQTIVQRFESQLGNVSVDEINTLVKKAEAAIASIVE
AHQPSKDFLVREIGQSLYTPQVGEQVYVKAFGNKLATVVEEPGDDDTILVQYGKIKVRVD
KSSIRPIPPDASSSAANLKTQVQQIRSLRDLGSLSEASKNQQDSYGPVLQTSKNTVDLRG
LRVEDASHQLKIAIDSRAPNSVIFVIHGMGTGVVKESALKLLKDHPRVVKFEPESPMNYG
CTVAYIK*

Transcript Sequence

Transcript ID

Solyc02g078390.3.1
Transcript Infomation

DNA mismatch repair protein MutS2 (AHRD V3.3 *** G7ZZ93_MEDTR)
Sequence

AATGGACAGCTTACTGTATTGCCGTGTAACCCACCCTTCCCTCCATTTTAGAGTAACTGG
ATAACGCACCCAAAAGCTCAACAAAAATTCAAACTTTATCTTCAATGAATCTTTTCAACT
TCAACTGCAAATGCAAATCCAACAATTTCTTCAGCATTCATCTTCCTCCGCCTCACAGCT
CGCTCTGTAACCGTCGTACAACTAGGTTCTCCGTCCGTTTCTCATCCGAGTCAACTCACA
GAGTCAAACTCGCCGAGTCACTGCAATCCGAAACCTTGAAGCTTCTAGAATGGCCCGCCG
TGTGTCAACAGCTCTCCGCTTTCACGTCCACATCCATGGGATACGCCGCAGCACAATCTG
CTCGGATTCCGGTGGGTAAAACTCGTGAAGAGAGCAGTAGACTTCTCTCTCAGACCTCGG
CCGCGGTGGCTGTACCTCGGCCGTTGGATTTTACCGGAATTGAAGATATTTCCCCAATTG
TTGATGCTTCCGTTGCAGGCGGTGTACTCTCGATTCGTGAACTTTGCTCTGTGAAACGAA
CCTTGGCAGCGGCGAGATTTTTGCTCCAACAGTTGGAGGAGATTGATTTTTCTGAAAGGT
ACTCTTCTCTGAAGGAAATTCTTCACAGTTGTGATTTTCTTGTGGAATTGGAGCAAAAAA
TAGAATTCTGTATTGATTGCAGCTTTTCAGTAATCCTTGATAGAGCTAGTGAAGATTTGG
AAATTATAAGATCCGAGAGAAAGAGGAACATGGATAATCTAGAATTATTGTTGAAGCAAT
TATCAACTCAAGTTTTTCAAGGTGGAGGATTTGACAGGCCTTTAGTGACCAAGCGCCGTT
CAAGATTGTGTGTTGCTGTGAGAGCTTCACATAGATCTTTGCTTCCTAATTCCGTAATCC
TAGATACAAGCAGTAGTGGATCTACATACTTCATGGAACCTAAAGAGGCAGTTGAGCTAA
ACAACATGGAAGTTAAACTTTCTAGTTCTGAGAAGGTTGAGGAGCAAACAATTTTGAGTT
TGCTTACATCTGAAATAGCAGAATCTAATATGAAAATAAAGCACTTATTAGATAAAATAT
TGGAAATCGATCTTGCATTTGCAAGGGCTGCTCATGCTCAGTGGATGGGTGCTGCCTGTC
CAGCTTTAAGTCCAAGAAATTGCAACATATCCCAATCTGAACATTTATCTATAAATGTAG
AAGGGATACAACATCCTTTGCTTCTTGAATCCTCCTTGGAAAACTTGTCGACTGATGTGT
CCCCAAGATCACCTGATTTGGATCAAGGAAATGGTGTCGTGAATTTCGAGACAAAATCTC
ATGCACATTTCCCTGTGCCCATTGATATTAAAATTGGTCATGGAACAAAGGTTGTTGTCA
TCTCGGGCCCAAATACCGGAGGCAAAACGGCTTCAATGAAGACTCTAGGACTGGCTTCTA
TGATGTTGAAGGCTGGCATGTATTTGCCTGCCCAAAATAAACCACAGCTTCCATGGTTTG
ACCTTATTCTGGCAGACATTGGGGACCAACAGTCTCTGGAGCAAAGTCTATCAACCTTTA
GTGGGCACATTTCACGGCTTCGTGAGATTCTAGAAGTTGCTTCTGGAGAATCTCTAGTTC
TTATTGATGAAATTGGAAGTGGGACCGATCCTTCAGAAGGTGTAGCACTTTCAGAAAGCA
TACTGCAATATCTCAAGGACAGGGTTAATTTAGCTGTTGTAACTACCCACTATGCGGATT
TAACTCGCTTAAAAGAAAAGGACAATCGGTTTGAAACAGCAGCAACAGAGTTTTCCTTGG
AGACTCTACAGCCTACCTATCGGATTCTATGGGGAAGCATGGGTGAATCAAATGCCTTGA
ATATTGCAAAATCAATGGGCTTTGATGAAAGAATAATTGAGCGAGCAGTATTATGGGTGA
ACAAATTGAGACCAGACAAGCAGCAGGAGCAGAAGGGTTTACTTTATCGGTCACTAATTG
AAGAAAGAGATAGACTAGAATCTCAAGCAATGGAAGCTGCTTCTCTTCATTCAGATATTA
TGAATATTTATAATGAGATTAACAATGAAACACAAGACCTTGATGGACGTGAAGCTGCCC
TCATAGCAAAGGAAACACATGAAATACAACAGGAAGTGAGAGCTGTGAAAAATGAGATCC
AAACTATAGTACAGCGGTTTGAGAGCCAACTCGGAAATGTAAGTGTTGACGAGATTAATA
CACTTGTAAAAAAAGCGGAAGCTGCTATTGCATCGATAGTTGAAGCTCATCAGCCTAGTA
AAGATTTTCTTGTCAGAGAAATAGGCCAGAGCCTTTACACACCACAGGTTGGTGAACAAG
TATATGTGAAGGCGTTTGGAAATAAGTTGGCCACTGTGGTTGAGGAACCTGGGGATGATG
ACACTATCCTTGTTCAATATGGAAAAATCAAAGTCCGCGTGGACAAGAGCAGTATAAGAC
CCATTCCCCCTGATGCTTCCTCCAGTGCAGCTAACTTGAAAACCCAGGTTCAGCAGATCA
GGAGTCTCAGGGACCTTGGAAGTCTCTCTGAAGCAAGCAAAAATCAGCAGGATTCTTATG
GCCCTGTGCTGCAGACATCTAAAAACACCGTAGATTTACGTGGCCTGAGAGTGGAGGATG
CTTCTCATCAGCTCAAAATAGCCATTGATTCAAGAGCGCCTAATTCTGTTATTTTTGTTA
TTCATGGGATGGGCACTGGAGTCGTAAAAGAATCTGCACTTAAATTACTAAAAGATCATC
CTCGTGTTGTTAAGTTTGAACCGGAAAGTCCTATGAATTATGGCTGTACAGTTGCTTATA
TCAAATGAAAACATTTGGACCAAACTCCAAAGTATAAAAGTAATATACTCAACCCATGTT
TCTGAACTGCACAAGTTGTTTCAATCAACACATGACAATTTTTG