Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g078380.3.1
CDS Infomation

Stem-specific protein TSJT1 (AHRD V3.3 *** A0A151T7D1_CAJCA)
Sequence

ATGTTGGCTGTGTTTGAGCAATCTATTGGGAAGCCACCTTCAGAGCTGAGCGTTGCTCAG
ACAGATAGACAGAAAAAGGAGGCTAAAACAAAGGAAGAGATTGAAGAAAGTTTCAAATCA
TGGAAGCCAGACTCAACTTTTTACCACCTTTCAAATGGGAATTTCATGGCTTTTTCTCAT
GGAAATGAAAACCCTTTCCATCCAAGGTCTATTGTGGTGATGGATGACATATTCTGCATC
TTTTCTGGTGGTTTAGACAACACTTTTGATTTGAGGAAATATTATGGTCTTTCAAGACAA
GCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATAC
CCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTAT
AAAGCCTCCACTCTTTTTCTTGCTAGGGATCGCGATGGAAGTGTGCCGTTACACTGGGGA
ACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGT
GGGAAATTGTATACCCCGTTTCCTCCAGGTTGTATCTTCATAAGTGACACTGGGCTAATA
AGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAAT
GTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGG
GGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGA

Peptide Sequence

PEP ID

Solyc02g078380.3.1
PEP Infomation

Stem-specific protein TSJT1 (AHRD V3.3 *** A0A151T7D1_CAJCA)
Sequence

MLAVFEQSIGKPPSELSVAQTDRQKKEAKTKEEIEESFKSWKPDSTFYHLSNGNFMAFSH
GNENPFHPRSIVVMDDIFCIFSGGLDNTFDLRKYYGLSRQATEAMIMVEAYKVLRDRAPY
PPDQVIKELEGKFAFILFDYKASTLFLARDRDGSVPLHWGTATDGSLVCSDDSEFIQASC
GKLYTPFPPGCIFISDTGLISFDHPMHKVKGIAREDDEGNVNAVIFQVDLYTKLHSIPRR
GSAANWAGATTVE*

Transcript Sequence

Transcript ID

Solyc02g078380.3.1
Transcript Infomation

Stem-specific protein TSJT1 (AHRD V3.3 *** A0A151T7D1_CAJCA)
Sequence

ATAATATTGTTGTTGCTGCTGGGAATTTTATGGTTAATGAAAAAAGTTTCTAGCTTTTAT
TTGAGTAGTAAACATGTTGGCTGTGTTTGAGCAATCTATTGGGAAGCCACCTTCAGAGCT
GAGCGTTGCTCAGACAGATAGACAGAAAAAGGAGGCTAAAACAAAGGAAGAGATTGAAGA
AAGTTTCAAATCATGGAAGCCAGACTCAACTTTTTACCACCTTTCAAATGGGAATTTCAT
GGCTTTTTCTCATGGAAATGAAAACCCTTTCCATCCAAGGTCTATTGTGGTGATGGATGA
CATATTCTGCATCTTTTCTGGTGGTTTAGACAACACTTTTGATTTGAGGAAATATTATGG
TCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGA
TCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCAT
TCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGGGATCGCGATGGAAGTGTGCC
GTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCAT
TCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAGGTTGTATCTTCATAAGTGA
CACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGA
TGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAG
CATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGG
AAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCA
CAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCA
ATAATAATATTTCCATCATCAATCGACTGTTTCTTACTAAACATGTTCAGTTACCT