Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g077780.3.1
CDS Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	ATGGCGTTAAATCCTAGTAGTAGAATGGACTCACAAACGGCTGCTGAAAAAGCCGTCTCT GTGATTGGGTTAGGTTATGATTTGACAAGTGATATCCGGTTGACGGCCTGTAAAATCGGA CCGAATGGGTATGGTTTGATAGAGATTGATCAGAAGTCGACCAAGGACCTGCTGGTGCCT GGTGGGGTGGTGGTTTCTAATGTTTCCACCTCTATCAAGTGCGATAAAGGGGAACGAACT AGGTTTCGCTCTGATGCTCTTTCTTTTAGTCAGATGTCAGAGCAATTAAATCAGGAGCTG TCCCTGTCTGGTAAGATACCTTCTGGGTTGTTTAATGCGATGTTTGGTCACAAGGGATGC TGGCAAAAAGATGCATCTTCGACAAAGCTTCTCGCTTTTGATGGTTGGTTCATTACCTTG TACAATATTGAGTTGGTGAGATCCCATCTAACACTGTCTGAGCAAGTAAAACAAGACGTG CCTTCTTCTTGGGATCCTCCTGCACTTGCAGAGTTTATTGAAAAATATGGCACCCATATT GTTGTCGGGGTAAAGATGGGAGGTAAAGATGTAATTCACATAAAGCAACTGCAAAATTCC GTTCTTCAGCCAATGGAGGTGCAGAAATTACTCAAGCAATTAGCTGATGAAAAATTTTCA GAAGACATAAATGGATGCCAGATAGCAAAACCTGTTAGATCTGTTGAAAAATCAAAGGGC GAAAAATCAATATTCTCAGATCCGCATCTACCATTTGCAAACTCAATGAGACCATCTATT ATGTCTTACTCCAAAGCTGATGATCTACTAAGTATTCATATCCGACGAGGAGGTCTTGAT TTTGGTCAAAGTCATAGCCAGTGGCTTCCTACTGTATCACAGTCCCCCAATGCTATATCA ATGTCGTTTGTGCCAATCGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTTTAAGC CATGCAATTAATCTTTACCTGCGATATAAACCACCAATCGAGGAACTTGAACAATTTTTA GAATTTCAGTTACCTCGGCAGTGGGCTCCAGCATATGGTGATCTTCCTCTTGGTCATCGC CACAGAAAACAGGCCTCTCCATCCTTGCAGTTCACTTTGATGGGTCCAAAGCTATACGTT AACACTGTAAAGGTTGACTCTGGAAACAGGCCAGTAACTGGAATTCGGTTATACTTGGAA GGTAAAAGGAGTGATCACCTGGCTATCCATCTTCAACATCTATCAGCACTTCCTCAAAGT ATCCAACTAACAGATGATCTTAGCTATGAGCCTGTCGATGAACCAGTTGAACGAGGGTAT CTTGAACCTGTCAAATGGAGCATATTTTCACATGTTTGCACCGCCCCAGTAGAATACCGT GGAACACGGATCGATGACTCTGCTTCTATTGTGACCAAGGCCTGGTTTGAGGTGAAGGTT ATTGGAATGAAGAAGGTCCTCTTCCTGAGGCTGGGATTCTCGATGGTCGCCTCAGCGAAG ATCCGTCGGTCAGAGTGGGAAGGACCAGCAACCACATGTCGAAAATCAGGTTTGATCTCA ATGCTGATCACTACCCCATTCAGTACAAAGCTAAACCAACCCCAGAAGCCAACAAAGGTG GACTTGAATTCCGCGGTTTATCCTGGTGGTCCACCTTCACCAGCAAGAGCGCCAAAGATG TCGCACTTTGTTGATACAACAGAAATGGTAAGAGGTCCCGAGGAGTCCCCTGGTTACTGG GTGGTTACTGGTGCAAAGCTGTGTGTAGAAGATAGTAGGATAAGAATGAAAGTGAAGTAC TCCCTCTTAACCATACTTACAGAGGAGTCATTGTTGATATAA

Peptide Sequence

PEP ID	Solyc02g077780.3.1
PEP Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	MALNPSSRMDSQTAAEKAVSVIGLGYDLTSDIRLTACKIGPNGYGLIEIDQKSTKDLLVP GGVVVSNVSTSIKCDKGERTRFRSDALSFSQMSEQLNQELSLSGKIPSGLFNAMFGHKGC WQKDASSTKLLAFDGWFITLYNIELVRSHLTLSEQVKQDVPSSWDPPALAEFIEKYGTHI VVGVKMGGKDVIHIKQLQNSVLQPMEVQKLLKQLADEKFSEDINGCQIAKPVRSVEKSKG EKSIFSDPHLPFANSMRPSIMSYSKADDLLSIHIRRGGLDFGQSHSQWLPTVSQSPNAIS MSFVPIASLLSGVRGSGFLSHAINLYLRYKPPIEELEQFLEFQLPRQWAPAYGDLPLGHR HRKQASPSLQFTLMGPKLYVNTVKVDSGNRPVTGIRLYLEGKRSDHLAIHLQHLSALPQS IQLTDDLSYEPVDEPVERGYLEPVKWSIFSHVCTAPVEYRGTRIDDSASIVTKAWFEVKV IGMKKVLFLRLGFSMVASAKIRRSEWEGPATTCRKSGLISMLITTPFSTKLNQPQKPTKV DLNSAVYPGGPPSPARAPKMSHFVDTTEMVRGPEESPGYWVVTGAKLCVEDSRIRMKVKY SLLTILTEESLLI*

Transcript Sequence

Transcript ID	Solyc02g077780.3.1
Transcript Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	AAACAGACAAAATAGAAAGACCTGCTTTCTTCTTTCATCAGCTCTAATTCTGGAAATAGT ACTCAAAAAAGGGCAAAGACTCCTATGAAGAAGAGAATTACTGTAAAAAAATAGTTGCAG ATTCTGACACCCTTTTGGGAAATTCGAATTGGGTTTGGGTTTTCTTGGGAGATGGCGTTA AATCCTAGTAGTAGAATGGACTCACAAACGGCTGCTGAAAAAGCCGTCTCTGTGATTGGG TTAGGTTATGATTTGACAAGTGATATCCGGTTGACGGCCTGTAAAATCGGACCGAATGGG TATGGTTTGATAGAGATTGATCAGAAGTCGACCAAGGACCTGCTGGTGCCTGGTGGGGTG GTGGTTTCTAATGTTTCCACCTCTATCAAGTGCGATAAAGGGGAACGAACTAGGTTTCGC TCTGATGCTCTTTCTTTTAGTCAGATGTCAGAGCAATTAAATCAGGAGCTGTCCCTGTCT GGTAAGATACCTTCTGGGTTGTTTAATGCGATGTTTGGTCACAAGGGATGCTGGCAAAAA GATGCATCTTCGACAAAGCTTCTCGCTTTTGATGGTTGGTTCATTACCTTGTACAATATT GAGTTGGTGAGATCCCATCTAACACTGTCTGAGCAAGTAAAACAAGACGTGCCTTCTTCT TGGGATCCTCCTGCACTTGCAGAGTTTATTGAAAAATATGGCACCCATATTGTTGTCGGG GTAAAGATGGGAGGTAAAGATGTAATTCACATAAAGCAACTGCAAAATTCCGTTCTTCAG CCAATGGAGGTGCAGAAATTACTCAAGCAATTAGCTGATGAAAAATTTTCAGAAGACATA AATGGATGCCAGATAGCAAAACCTGTTAGATCTGTTGAAAAATCAAAGGGCGAAAAATCA ATATTCTCAGATCCGCATCTACCATTTGCAAACTCAATGAGACCATCTATTATGTCTTAC TCCAAAGCTGATGATCTACTAAGTATTCATATCCGACGAGGAGGTCTTGATTTTGGTCAA AGTCATAGCCAGTGGCTTCCTACTGTATCACAGTCCCCCAATGCTATATCAATGTCGTTT GTGCCAATCGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTTTAAGCCATGCAATT AATCTTTACCTGCGATATAAACCACCAATCGAGGAACTTGAACAATTTTTAGAATTTCAG TTACCTCGGCAGTGGGCTCCAGCATATGGTGATCTTCCTCTTGGTCATCGCCACAGAAAA CAGGCCTCTCCATCCTTGCAGTTCACTTTGATGGGTCCAAAGCTATACGTTAACACTGTA AAGGTTGACTCTGGAAACAGGCCAGTAACTGGAATTCGGTTATACTTGGAAGGTAAAAGG AGTGATCACCTGGCTATCCATCTTCAACATCTATCAGCACTTCCTCAAAGTATCCAACTA ACAGATGATCTTAGCTATGAGCCTGTCGATGAACCAGTTGAACGAGGGTATCTTGAACCT GTCAAATGGAGCATATTTTCACATGTTTGCACCGCCCCAGTAGAATACCGTGGAACACGG ATCGATGACTCTGCTTCTATTGTGACCAAGGCCTGGTTTGAGGTGAAGGTTATTGGAATG AAGAAGGTCCTCTTCCTGAGGCTGGGATTCTCGATGGTCGCCTCAGCGAAGATCCGTCGG TCAGAGTGGGAAGGACCAGCAACCACATGTCGAAAATCAGGTTTGATCTCAATGCTGATC ACTACCCCATTCAGTACAAAGCTAAACCAACCCCAGAAGCCAACAAAGGTGGACTTGAAT TCCGCGGTTTATCCTGGTGGTCCACCTTCACCAGCAAGAGCGCCAAAGATGTCGCACTTT GTTGATACAACAGAAATGGTAAGAGGTCCCGAGGAGTCCCCTGGTTACTGGGTGGTTACT GGTGCAAAGCTGTGTGTAGAAGATAGTAGGATAAGAATGAAAGTGAAGTACTCCCTCTTA ACCATACTTACAGAGGAGTCATTGTTGATATAAACGATTGAAAGATTTCATTTCAAGCTT TATCCATCTTTCTCTATAGGACATTGTGTATATTTCATCTGATATTTGCGCAGATATGCA GAAAGTGTTATAGCAAGGTCAAATTGACCCAGTTAACAGTTGAGTGTGTAAAGAAATTAT GAAACTTTTGTTGAAAGAAAACGAAGAGTTTCTGAATGTACATTTAACGTTCCTAAATGC ACTCTTATTATTTCTCTGATCATTGCT