Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g077090.3.1
CDS Infomation	Protein CHUP1, chloroplastic-like protein (AHRD V3.3 - A0A0B0P0R5_GOSAR)
Sequence	AGAAAAAAAAAATCAAAGCGGATCCAAGAAAAGAAGACCGTTCATCGATATTGCTGCATC ATTTACACATTTCAAAGTTTCAACAAAGAAATACCTTCTTTACAAAAACACAGACTTCAA AATTTTGTTCTAGATGCTACAATGGTTGCTGGTAAAGTAAAAATGGCTATGGGTTTACAG AAATCACCGGCTAATCCAAAGCCGTCGAAGCAAGATTCATCTCCTAAGCCTCCTACTCCT TCACCAAGCTGCCCCAAACAGCAAACATCCAAAGGTGCTGTGTTTTCTCGTTCTTTCGGG GTTTATTTTCCTCGTTCCTCTGCTCAAGTTCAGCCTCGTCCACCGGATGTTGCGGAGCTC CTACGTATAGTTGAAGAGTTGCGGGAAAGAGAGTCACGTTTGAAAACAGAGCTGCTTGAG AAGAAACTGCTTAAAGAGTCAGTGGCTATACTTCCGTTGTTGGAGAGTGAGATCACTCAA AAAGATGCGGAAATCGGACGAAAAGGACGGATGATTGAATGCTTGGAAGTGGAAAACGAG AGGCTTAGAGAAGAAGTAGAGATGTTACACATTGAGCTTTCGAAGCAAAATGGGAGGTAT GATGAGAGGATAAAAGCTATGGAAGCTGAAATTTCTGAGCTGAAGAAAGCTAATGAAGAG TTATCTGCTCATAGATTTGTAGATGTGACAAATGGTGCTCATAGCAAAGCAAACATCACC AAGTATTTGAGAAAATGTGTGACTCAACCTAGCATTACTGTAACTTCAAAACCAGAGTGT GAAATGAAAGAGGAAATTGTTAGTGCATTGGAAATGTGTGAAAGGCCTAGACATTCTCGG TCTAATTCAGATGAGCTAGCTGATATATCTGTTGGGATTATGAGTTTAAGATCACGAGTT CCCCGAGTACCTAAACCACCACCGCGGCCATCGTCTGCGCTATTGCCATCATCCTCATCA TCCTCGTCTTTATCATCTTCTTCATCTTCTCCTTCGTATAGTTCGTTGTCAGATTCAGCT GAACGTGCATTAGCTGAAATTTCTAACATTCCGCCTCCACCTCCCCCACCTCCGCTAGCA GCACCAGCGCCGCCCAAACTGGCAGCAGTTCCTCCTCCACCGCCCCCGCCGCCACCACCA CTACCTCCAGCTGCGTCCAAAACAGGCCCACCACCACCTCCTCCACCACCTCCGAAAGGC TTAAAGACTTTACCAGCAAAGGTCAGGCGGATACCTGAAGTAGTGGAGTTTTATCACTCT CTAATGCGGAGAGACTGCCGGAGAGATTCCGGTGCTGGAGTTGCTTCCGCTGCCGATGCT CCATCTTCGGCGAAGGATATGATCGGAGAAATTGAGAACCGGTCTGCGCATTTACTAGCG ATTAAAACAGATGTTGAGACGCAAGGAGATTTTATTAGGTTTTTGATCAAAGAAGTAGAA CATGCTGCATTCACAGACATTGTGGATGTTGTGCCTTTTGTAAAATGGCTTGATGACGAG CTCTCCTACTTGGTTGATGAAAGGGCTGTTCTGAAACACTTTGAATGGCCTGAACAAAAG GCTGATGCATTGAGAGAAGCTGCATTTGGATATTGTGATCTAAAGAAACTAGAATCTGAG GCATCGTCCTTTCGTGATAATCCTAGACAACCATGTGGCACAGCTCTTAAGAAAATGCAG GCCTTATTTGAGAAATTAGAGCATGGAATTTACAATCTGTCAAGAATGAGAGAATCAGCC ACTAAGAGATATAAAGTTTTCCAAATCCCAATTGAGTGGATGCTGGATACTGGTTTTGTT ACTCAGATCAAGCTGGCATCAGTAAAATTAGCCATGAAGTACATGAAGAGGGTATCTGCA GAGTTAGAAATGGTTGGTGGTGGTCCTGAAGAAGAAGAGCTTATAATTCAAGGCGTTAGG TTTGCCTTTCGAGTACATCAGTTTGCGGGTGGTTTCGACGTGGAGACAATGAGGGCATTC CAAGAGCTGAGAGACAAAGCAAGATCATGCCATATACAATGTCAAAATCAGCAACAGCAG CAACACAAATATGTTTGCAAATCTTCTACACCTTGCTAA

Peptide Sequence

PEP ID	Solyc02g077090.3.1
PEP Infomation	Protein CHUP1, chloroplastic-like protein (AHRD V3.3 - A0A0B0P0R5_GOSAR)
Sequence	RKKKSKRIQEKKTVHRYCCIIYTFQSFNKEIPSLQKHRLQNFVLDATMVAGKVKMAMGLQ KSPANPKPSKQDSSPKPPTPSPSCPKQQTSKGAVFSRSFGVYFPRSSAQVQPRPPDVAEL LRIVEELRERESRLKTELLEKKLLKESVAILPLLESEITQKDAEIGRKGRMIECLEVENE RLREEVEMLHIELSKQNGRYDERIKAMEAEISELKKANEELSAHRFVDVTNGAHSKANIT KYLRKCVTQPSITVTSKPECEMKEEIVSALEMCERPRHSRSNSDELADISVGIMSLRSRV PRVPKPPPRPSSALLPSSSSSSSLSSSSSSPSYSSLSDSAERALAEISNIPPPPPPPPLA APAPPKLAAVPPPPPPPPPPLPPAASKTGPPPPPPPPPKGLKTLPAKVRRIPEVVEFYHS LMRRDCRRDSGAGVASAADAPSSAKDMIGEIENRSAHLLAIKTDVETQGDFIRFLIKEVE HAAFTDIVDVVPFVKWLDDELSYLVDERAVLKHFEWPEQKADALREAAFGYCDLKKLESE ASSFRDNPRQPCGTALKKMQALFEKLEHGIYNLSRMRESATKRYKVFQIPIEWMLDTGFV TQIKLASVKLAMKYMKRVSAELEMVGGGPEEEELIIQGVRFAFRVHQFAGGFDVETMRAF QELRDKARSCHIQCQNQQQQQHKYVCKSSTPC*

Transcript Sequence

Transcript ID	Solyc02g077090.3.1
Transcript Infomation	Protein CHUP1, chloroplastic-like protein (AHRD V3.3 - A0A0B0P0R5_GOSAR)
Sequence	AGAAAAAAAAAATCAAAGCGGATCCAAGAAAAGAAGACCGTTCATCGATATTGCTGCATC ATTTACACATTTCAAAGTTTCAACAAAGAAATACCTTCTTTACAAAAACACAGACTTCAA AATTTTGTTCTAGATGCTACAATGGTTGCTGGTAAAGTAAAAATGGCTATGGGTTTACAG AAATCACCGGCTAATCCAAAGCCGTCGAAGCAAGATTCATCTCCTAAGCCTCCTACTCCT TCACCAAGCTGCCCCAAACAGCAAACATCCAAAGGTGCTGTGTTTTCTCGTTCTTTCGGG GTTTATTTTCCTCGTTCCTCTGCTCAAGTTCAGCCTCGTCCACCGGATGTTGCGGAGCTC CTACGTATAGTTGAAGAGTTGCGGGAAAGAGAGTCACGTTTGAAAACAGAGCTGCTTGAG AAGAAACTGCTTAAAGAGTCAGTGGCTATACTTCCGTTGTTGGAGAGTGAGATCACTCAA AAAGATGCGGAAATCGGACGAAAAGGACGGATGATTGAATGCTTGGAAGTGGAAAACGAG AGGCTTAGAGAAGAAGTAGAGATGTTACACATTGAGCTTTCGAAGCAAAATGGGAGGTAT GATGAGAGGATAAAAGCTATGGAAGCTGAAATTTCTGAGCTGAAGAAAGCTAATGAAGAG TTATCTGCTCATAGATTTGTAGATGTGACAAATGGTGCTCATAGCAAAGCAAACATCACC AAGTATTTGAGAAAATGTGTGACTCAACCTAGCATTACTGTAACTTCAAAACCAGAGTGT GAAATGAAAGAGGAAATTGTTAGTGCATTGGAAATGTGTGAAAGGCCTAGACATTCTCGG TCTAATTCAGATGAGCTAGCTGATATATCTGTTGGGATTATGAGTTTAAGATCACGAGTT CCCCGAGTACCTAAACCACCACCGCGGCCATCGTCTGCGCTATTGCCATCATCCTCATCA TCCTCGTCTTTATCATCTTCTTCATCTTCTCCTTCGTATAGTTCGTTGTCAGATTCAGCT GAACGTGCATTAGCTGAAATTTCTAACATTCCGCCTCCACCTCCCCCACCTCCGCTAGCA GCACCAGCGCCGCCCAAACTGGCAGCAGTTCCTCCTCCACCGCCCCCGCCGCCACCACCA CTACCTCCAGCTGCGTCCAAAACAGGCCCACCACCACCTCCTCCACCACCTCCGAAAGGC TTAAAGACTTTACCAGCAAAGGTCAGGCGGATACCTGAAGTAGTGGAGTTTTATCACTCT CTAATGCGGAGAGACTGCCGGAGAGATTCCGGTGCTGGAGTTGCTTCCGCTGCCGATGCT CCATCTTCGGCGAAGGATATGATCGGAGAAATTGAGAACCGGTCTGCGCATTTACTAGCG ATTAAAACAGATGTTGAGACGCAAGGAGATTTTATTAGGTTTTTGATCAAAGAAGTAGAA CATGCTGCATTCACAGACATTGTGGATGTTGTGCCTTTTGTAAAATGGCTTGATGACGAG CTCTCCTACTTGGTTGATGAAAGGGCTGTTCTGAAACACTTTGAATGGCCTGAACAAAAG GCTGATGCATTGAGAGAAGCTGCATTTGGATATTGTGATCTAAAGAAACTAGAATCTGAG GCATCGTCCTTTCGTGATAATCCTAGACAACCATGTGGCACAGCTCTTAAGAAAATGCAG GCCTTATTTGAGAAATTAGAGCATGGAATTTACAATCTGTCAAGAATGAGAGAATCAGCC ACTAAGAGATATAAAGTTTTCCAAATCCCAATTGAGTGGATGCTGGATACTGGTTTTGTT ACTCAGATCAAGCTGGCATCAGTAAAATTAGCCATGAAGTACATGAAGAGGGTATCTGCA GAGTTAGAAATGGTTGGTGGTGGTCCTGAAGAAGAAGAGCTTATAATTCAAGGCGTTAGG TTTGCCTTTCGAGTACATCAGTTTGCGGGTGGTTTCGACGTGGAGACAATGAGGGCATTC CAAGAGCTGAGAGACAAAGCAAGATCATGCCATATACAATGTCAAAATCAGCAACAGCAG CAACACAAATATGTTTGCAAATCTTCTACACCTTGCTAATTCATTATCTGTAGCAAACTC AGCTTCAGAATGCTGTTATTTTTGTTGTATAAAAAATGACATCACCAATGTGAATGTGAA TATACCAATGGCAGTAGCCATTTTTCTGCTTAAATATTTATTAATTTATTCATAATTCGT GTGAAAATAGACTCTCTATCAGTTCAA