Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g076910.3.1
CDS Infomation

Cysteine protease (AHRD V3.3 *** E7D4U5_TOBAC)
Sequence

ATGACCATATTTACAAATCGTAGCAAATACATTTGCTTAGCTTTGTTCTTTATAGTTTTT
GGACTTTGGAGCTCTCAATTAGCTTCATCACGTCCGATTAACAATGAGACAACCATGCGA
GTTAGGCATGAGCAATGGATTGCCCATCATGACAAAATTTACAACGATCTGAAAGAGAAA
GAAATACGTTTCAAGATATTCAAAGAAAACGTGGAACGTATAGAAACTTTTAATGCAGGA
GAAGATAAAGGGTACAAACTTGGCGTTAATAAATTTGCTGATCTCACAAACGAAGAGTTT
CGTGTGTTACATACCGGTTACAAGAGTTCATCACACCCTAAGATTATGTCCTCCTCAAAG
CCAAAAACACATTTTAGGTACGCTAATATAACAGACGTACCGCCTATTATGGATTGGAGA
AGGAAAGGAGCTGTTACCCCTATCAAGGACCAAATGGAATGTGGATGCTGTTGGGCATTT
TCTGCAGTAGCAGCTATGGAAGGGCTACACCAACTGAAAACAGGAAAATTAATCCCTTTA
TCAGAGCAAGAGCTTGTAGATTGTGATGTCGAAGGCGAGGACCTAGGTTGCACCGGAGGA
CTCTTGGATACTGCCTTTCAATTCATCATAAAAAATAAGGGCCTTACTACTGAAGCAAAT
TATCCATACCAGGCAGCAGATGGTGTCTGCAACAAGAAAAAATCAGCTCTTTCAGTAGCC
AAAATTACAGGATATGAAGATGTACCGGCCAACAACGAGAAGGCTCTTTTGCAAGCTGTG
GCTAATCAACCGGTGTCGGTGGCAATCGATGGGAGTAGCTTCGATTTCCAGTTTTATTCA
AGTGGTGTATTTAGTGGATCATGCAGTACTTGGCTTAACCATGCTGTTACGGCAGTGGGA
TATGGTGCTGCAAGTGATGGTACAAAATATTGGATTATAAAGAATTCATGGGGTAGTAAA
TGGGGTGAAAATGGATATGCACACATGAAAAGAGATATTGATGATAAAAAAGGCCTTTGT
GGACTTGCCATGAAGGCTTCTTATCCCACTGCCTAA

Peptide Sequence

PEP ID

Solyc02g076910.3.1
PEP Infomation

Cysteine protease (AHRD V3.3 *** E7D4U5_TOBAC)
Sequence

MTIFTNRSKYICLALFFIVFGLWSSQLASSRPINNETTMRVRHEQWIAHHDKIYNDLKEK
EIRFKIFKENVERIETFNAGEDKGYKLGVNKFADLTNEEFRVLHTGYKSSSHPKIMSSSK
PKTHFRYANITDVPPIMDWRRKGAVTPIKDQMECGCCWAFSAVAAMEGLHQLKTGKLIPL
SEQELVDCDVEGEDLGCTGGLLDTAFQFIIKNKGLTTEANYPYQAADGVCNKKKSALSVA
KITGYEDVPANNEKALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVG
YGAASDGTKYWIIKNSWGSKWGENGYAHMKRDIDDKKGLCGLAMKASYPTA*

Transcript Sequence

Transcript ID

Solyc02g076910.3.1
Transcript Infomation

Cysteine protease (AHRD V3.3 *** E7D4U5_TOBAC)
Sequence

ATTCATCCAAAAAAAAAAAAAAATCATTTTCCCTAATCTCATAATAAAATAACTAGTTTT
TCCATAATGACCATATTTACAAATCGTAGCAAATACATTTGCTTAGCTTTGTTCTTTATA
GTTTTTGGACTTTGGAGCTCTCAATTAGCTTCATCACGTCCGATTAACAATGAGACAACC
ATGCGAGTTAGGCATGAGCAATGGATTGCCCATCATGACAAAATTTACAACGATCTGAAA
GAGAAAGAAATACGTTTCAAGATATTCAAAGAAAACGTGGAACGTATAGAAACTTTTAAT
GCAGGAGAAGATAAAGGGTACAAACTTGGCGTTAATAAATTTGCTGATCTCACAAACGAA
GAGTTTCGTGTGTTACATACCGGTTACAAGAGTTCATCACACCCTAAGATTATGTCCTCC
TCAAAGCCAAAAACACATTTTAGGTACGCTAATATAACAGACGTACCGCCTATTATGGAT
TGGAGAAGGAAAGGAGCTGTTACCCCTATCAAGGACCAAATGGAATGTGGATGCTGTTGG
GCATTTTCTGCAGTAGCAGCTATGGAAGGGCTACACCAACTGAAAACAGGAAAATTAATC
CCTTTATCAGAGCAAGAGCTTGTAGATTGTGATGTCGAAGGCGAGGACCTAGGTTGCACC
GGAGGACTCTTGGATACTGCCTTTCAATTCATCATAAAAAATAAGGGCCTTACTACTGAA
GCAAATTATCCATACCAGGCAGCAGATGGTGTCTGCAACAAGAAAAAATCAGCTCTTTCA
GTAGCCAAAATTACAGGATATGAAGATGTACCGGCCAACAACGAGAAGGCTCTTTTGCAA
GCTGTGGCTAATCAACCGGTGTCGGTGGCAATCGATGGGAGTAGCTTCGATTTCCAGTTT
TATTCAAGTGGTGTATTTAGTGGATCATGCAGTACTTGGCTTAACCATGCTGTTACGGCA
GTGGGATATGGTGCTGCAAGTGATGGTACAAAATATTGGATTATAAAGAATTCATGGGGT
AGTAAATGGGGTGAAAATGGATATGCACACATGAAAAGAGATATTGATGATAAAAAAGGC
CTTTGTGGACTTGCCATGAAGGCTTCTTATCCCACTGCCTAAACGAAATTAATTATCCTT
AGCTTTTTACTACTAGTATTTTTCAACCATCAACATATGTGAATACTTTCTTTTTTTGGG
TTT