Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g076690.3.1
CDS Infomation

Cysteine protease (AHRD V3.3 *** Q7XYU8_ANTAD)
Sequence

ATGGAAAATACACAAAAATCCTACCTTTTTCTTCTTCTTAGTTTCCCACTTTTCTTGATC
TTAGCAACATTATCATCTCAAGTTTCTGCTTTTACTACTTATTTTCCAGAATTAGACAAG
CCGCAAGAGTTGCTTACAGAAGAAAGAGTTTTCCAACTATTCCAAGAATGGAAACAGAAG
CATGGGAAAATTTACAAGAATGAGAAAGAGGAAGAAAGGAGGTTGGAGAATTTTAAAAGG
AATGTGAAGTATATAGTGGACAAGAACTCAAAGAGAAGGTCAGAATCAGACCATTTAGTT
GGTTTGAACAATTTTGCTGATATGAGCAATGAAGAGTTCAGTCAAGTTCATACTTCAAAG
ATTAAGATGCCTTTTAAACAGCAGAACAAGACCACTATTTCTGCGAATTCATGTGATGCT
CCTCCTGCTAAGGATTGGAGGAAACATGGGGTTGTCACTGAGGTTAAGAATCAAGGAGCA
TGTGGATGTTGTTGGGCATTTTCCGCATGTGGAGCCATTGAAGGAATAAATGCATTGGTC
ACTGGTGAACTTATTAGCCTTTCAACTCAAGAACTTGTCAACTGTGACACATCTAATAAA
GGGTGTGAAGGTGGACTTATGGACCCTGCTTTTAAATTTGTGATCAACAATAGGGGCATT
GATTCAGCAGCTGATTATCCATACACCAAATCTCGAGGCTCTTGCAGTTACAACAAGTTG
AACAAGAAGGCTGTAACAATTGATGGATATCAAGATGTTGCACAAGAAGAAAGTGCCCTA
CTTTGTGCTGTTGCTAGACAACCTGTCAGTGTAGGCATTGATGGAAAAAGCCTTGATTTT
CAGCTATATGCAGGGGGAATCTATGATGGAGAATGCTCTAGTAATCCAGATGACTTATCC
CATGCAGTACTAATTGTAGGATACGGTTCTGAAGGAGGAGTTGACTATTGGATTATCAAG
AACTCATGGGGAAAATCTTGGGGCATGGAGGGGTATGCATATATAAAAAGGAACACTGTT
TTGCCATATGGGATATGTGGTATTAATTCACTGGCTTCTTATCCCATGAAAGAATCGTCT
TCCGCTCCACCATCCCCTCCAAAACCAAATATATGTGAAGACGGCTTACATTACTGTCCA
GAAGGTCAAACATGCTGCTGCGGCTTAGATTTCTTTGGCAAGTGCTTAGTTCATGGATGC
TGTCCTATTGAAAATGGTGTTTGCTGTGAGAATTCAAGATTATGCTGCCCTCAAGACTTC
CCATATTGTGATGTTTTACAAGGCCTCTGCCACAAGGATTATGGAGACAAAATTGGAGTT
GCTGCAAGGAAGAGAACAATGGCCAAGCTCAAGCTAACATGGAGCAGTGCTACTAAGGAA
ATAGATGAAATGGACCAAACTTTCCAATGGAACAGGAGGAATCAGTTTGCTGTGATGCGC
TGA

Peptide Sequence

PEP ID

Solyc02g076690.3.1
PEP Infomation

Cysteine protease (AHRD V3.3 *** Q7XYU8_ANTAD)
Sequence

MENTQKSYLFLLLSFPLFLILATLSSQVSAFTTYFPELDKPQELLTEERVFQLFQEWKQK
HGKIYKNEKEEERRLENFKRNVKYIVDKNSKRRSESDHLVGLNNFADMSNEEFSQVHTSK
IKMPFKQQNKTTISANSCDAPPAKDWRKHGVVTEVKNQGACGCCWAFSACGAIEGINALV
TGELISLSTQELVNCDTSNKGCEGGLMDPAFKFVINNRGIDSAADYPYTKSRGSCSYNKL
NKKAVTIDGYQDVAQEESALLCAVARQPVSVGIDGKSLDFQLYAGGIYDGECSSNPDDLS
HAVLIVGYGSEGGVDYWIIKNSWGKSWGMEGYAYIKRNTVLPYGICGINSLASYPMKESS
SAPPSPPKPNICEDGLHYCPEGQTCCCGLDFFGKCLVHGCCPIENGVCCENSRLCCPQDF
PYCDVLQGLCHKDYGDKIGVAARKRTMAKLKLTWSSATKEIDEMDQTFQWNRRNQFAVMR
*

Transcript Sequence

Transcript ID

Solyc02g076690.3.1
Transcript Infomation

Cysteine protease (AHRD V3.3 *** Q7XYU8_ANTAD)
Sequence

ATGGAAAATACACAAAAATCCTACCTTTTTCTTCTTCTTAGTTTCCCACTTTTCTTGATC
TTAGCAACATTATCATCTCAAGTTTCTGCTTTTACTACTTATTTTCCAGAATTAGACAAG
CCGCAAGAGTTGCTTACAGAAGAAAGAGTTTTCCAACTATTCCAAGAATGGAAACAGAAG
CATGGGAAAATTTACAAGAATGAGAAAGAGGAAGAAAGGAGGTTGGAGAATTTTAAAAGG
AATGTGAAGTATATAGTGGACAAGAACTCAAAGAGAAGGTCAGAATCAGACCATTTAGTT
GGTTTGAACAATTTTGCTGATATGAGCAATGAAGAGTTCAGTCAAGTTCATACTTCAAAG
ATTAAGATGCCTTTTAAACAGCAGAACAAGACCACTATTTCTGCGAATTCATGTGATGCT
CCTCCTGCTAAGGATTGGAGGAAACATGGGGTTGTCACTGAGGTTAAGAATCAAGGAGCA
TGTGGATGTTGTTGGGCATTTTCCGCATGTGGAGCCATTGAAGGAATAAATGCATTGGTC
ACTGGTGAACTTATTAGCCTTTCAACTCAAGAACTTGTCAACTGTGACACATCTAATAAA
GGGTGTGAAGGTGGACTTATGGACCCTGCTTTTAAATTTGTGATCAACAATAGGGGCATT
GATTCAGCAGCTGATTATCCATACACCAAATCTCGAGGCTCTTGCAGTTACAACAAGTTG
AACAAGAAGGCTGTAACAATTGATGGATATCAAGATGTTGCACAAGAAGAAAGTGCCCTA
CTTTGTGCTGTTGCTAGACAACCTGTCAGTGTAGGCATTGATGGAAAAAGCCTTGATTTT
CAGCTATATGCAGGGGGAATCTATGATGGAGAATGCTCTAGTAATCCAGATGACTTATCC
CATGCAGTACTAATTGTAGGATACGGTTCTGAAGGAGGAGTTGACTATTGGATTATCAAG
AACTCATGGGGAAAATCTTGGGGCATGGAGGGGTATGCATATATAAAAAGGAACACTGTT
TTGCCATATGGGATATGTGGTATTAATTCACTGGCTTCTTATCCCATGAAAGAATCGTCT
TCCGCTCCACCATCCCCTCCAAAACCAAATATATGTGAAGACGGCTTACATTACTGTCCA
GAAGGTCAAACATGCTGCTGCGGCTTAGATTTCTTTGGCAAGTGCTTAGTTCATGGATGC
TGTCCTATTGAAAATGGTGTTTGCTGTGAGAATTCAAGATTATGCTGCCCTCAAGACTTC
CCATATTGTGATGTTTTACAAGGCCTCTGCCACAAGGATTATGGAGACAAAATTGGAGTT
GCTGCAAGGAAGAGAACAATGGCCAAGCTCAAGCTAACATGGAGCAGTGCTACTAAGGAA
ATAGATGAAATGGACCAAACTTTCCAATGGAACAGGAGGAATCAGTTTGCTGTGATGCGC
TGAAACAACTTATCTAAGTTATTATAGCTTTTATCATCCCAACTGGCACTCTGGTTCTTG
TTGGTCAAGTAAATGTTGTAGAAAAATATGTAAAAGAAAAAATGTACAAAAATCCTTCGA
TTATCTATATATAACAATTTATGAAGCACAAAAAAAGAATAAATACTTGCGTTTTTGAAT
ACAAGTATTGAAATCTATGGCAAACAGTAAAAGAATGTTGATAAACATTTTTTTTTCTCC
TTATAATAAGCTTGGTCTACTAAAAACAATAAACCATAAATTGCTTTTAAACAAGTTTAA
TCAAGTTATAAGTTTATCAAAACACCCTTCTTATTACAAATGTTCCTTCATCCCAAGAAC
CAAATATGCAAGACTTTAGAAATGGATTGAGAGAGAAGAAAATGGTACTAAAGGGTTAGA
TGGGGTGTGTTATTATTACCTAAGTTGAGCCCAATTTATTTT