Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g072540.3.1
CDS Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IFU0_SOLCH)
Sequence

ATGACTTCGAAGAACGATAAGAAAGGCAATATTTTGATGCAAAGGTATGAGATTGGGAAA
TTGCTTGGGCAGGGTACATTTGCAAAAGTATACCATGCTAGAAATCTCAAAACAGGGCAA
AGTGTTGCTATTAAGGTGATTGACAAAGAGAAGATTATGAAGGTTGGGTTAATTGATCAA
ACGAAACGTGAAATCTCCGTCATGAGGCTAATCAAACACCCAAATATTGTCCAGCTCTAT
GAGGTTATGGCGAGCAAAACAAAAATATATTTTGCTATGGAATATGTTAGAGGTGGTGAA
CTTTTCAATAAGGTTGCTAAAGGCAGACTTAAAGAAGATGCTGCAAGAAAATACTTTCAA
CAGTTAATCGCTGCAGTCGATTTCTGTCATAGCCGTGATGTCTACCACCGTGATCTCAAG
CCTGAAAATCTCCTCCTTGACGAAGGTGGCAATCTGAAAGTCTCGGATTTTGGTCTGAGT
GCATTGTTTGATTCGAAAAGGCAAGATGGTCTACTCCACACGACGTGTGGAACACCGGCT
TATGTTGCACCAGAGGTGATCAATAAGAGAGGTTATGATGGTGAAAAGGCTGATATTTGG
TCATGTGGTGTTGTTTTGTTTGTCCTGTTAGCGGGTTATTTGCCATTCCATGACCAAAAT
CTTATGGAAATGTACAAAAAAATAAGCAAAGCAGAATTCAAATGTCCACAATGGTTCCAT
CCAGAGGTAAGAAAGTTACTCTCAAGGATTCTTGATCCAAATCCAGGATCAAGAATCACC
TTAATTAAGCTCATGGAGAATTATTGGTTCAAAAAAGGATTCAAACAAGTTGATAAAACC
CCAAATTCAGGGAAAGATCAACGTGAATCCCCTCGTAGTGTTTTCGATATTGAGGACAAT
AATTCAGACGGAGAGGGACCTTCCAATCGCCAAAAGAATCAAGATTCCACAACAATGAAG
CCTACTTGCTTAAATGCATTTGATATAATCTCTCTTTCCCCTGGTTTCAATCTTTCTGGA
TTATTCGAAAAGGAGAAAGAGAGAAGATCAGAAGCGCGATTCACAGCGAAAAAACCAGCT
TCTATAATAGTGTCAAAATTGGAAGAAGTAGCTTCAAATGAGAGTTTTAATATAATGAAA
AAAGATGGTACAGTGACAATGCAGAGTAACAAAGAAGGAAGGAAAGGGCAACTAGCAATT
GATGCAGAGATATTCGAAATTACGCCTTCTTTTCATGTTGTGGAAGTGAGTAAAAAATCA
GGGGATACAATGGAATACAAGAAATTCTTTGATCAGGGATTGAAAACATCACTTAAAGAT
ATTGTTTGGACATGGCAAGATGGTGAACAACAACAACAAGTTGAAAATCAAGAAAGAATT
TGA

Peptide Sequence

PEP ID

Solyc02g072540.3.1
PEP Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IFU0_SOLCH)
Sequence

MTSKNDKKGNILMQRYEIGKLLGQGTFAKVYHARNLKTGQSVAIKVIDKEKIMKVGLIDQ
TKREISVMRLIKHPNIVQLYEVMASKTKIYFAMEYVRGGELFNKVAKGRLKEDAARKYFQ
QLIAAVDFCHSRDVYHRDLKPENLLLDEGGNLKVSDFGLSALFDSKRQDGLLHTTCGTPA
YVAPEVINKRGYDGEKADIWSCGVVLFVLLAGYLPFHDQNLMEMYKKISKAEFKCPQWFH
PEVRKLLSRILDPNPGSRITLIKLMENYWFKKGFKQVDKTPNSGKDQRESPRSVFDIEDN
NSDGEGPSNRQKNQDSTTMKPTCLNAFDIISLSPGFNLSGLFEKEKERRSEARFTAKKPA
SIIVSKLEEVASNESFNIMKKDGTVTMQSNKEGRKGQLAIDAEIFEITPSFHVVEVSKKS
GDTMEYKKFFDQGLKTSLKDIVWTWQDGEQQQQVENQERI*

Transcript Sequence

Transcript ID

Solyc02g072540.3.1
Transcript Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IFU0_SOLCH)
Sequence

AAACACAATGAAATGTAGTGCATTTATTGCCATAAGTTTGCTCCATACTAATTGAGACTA
CTTTCTCCTATAGGCATTTCCTCTAACCCTGCCACAAATAAGGCAAGGTTTTTGCCCTTC
TTTTTCCCTTGTAATTTCATCAATATTCCAAATCTTTCAACAAAACAAAAAGGGCTCCTT
AATCTCCATGCAATAACAACTACGCCTCTGTTCCAAACAGATTACGATTACAATGGCAAT
GAATCCTCAACAAAATTAAAAAGAAAAAATAATTTGTCTCAATTGTATTGCCAATTTCTT
CTTCAGGATGACTTCGAAGAACGATAAGAAAGGCAATATTTTGATGCAAAGGTATGAGAT
TGGGAAATTGCTTGGGCAGGGTACATTTGCAAAAGTATACCATGCTAGAAATCTCAAAAC
AGGGCAAAGTGTTGCTATTAAGGTGATTGACAAAGAGAAGATTATGAAGGTTGGGTTAAT
TGATCAAACGAAACGTGAAATCTCCGTCATGAGGCTAATCAAACACCCAAATATTGTCCA
GCTCTATGAGGTTATGGCGAGCAAAACAAAAATATATTTTGCTATGGAATATGTTAGAGG
TGGTGAACTTTTCAATAAGGTTGCTAAAGGCAGACTTAAAGAAGATGCTGCAAGAAAATA
CTTTCAACAGTTAATCGCTGCAGTCGATTTCTGTCATAGCCGTGATGTCTACCACCGTGA
TCTCAAGCCTGAAAATCTCCTCCTTGACGAAGGTGGCAATCTGAAAGTCTCGGATTTTGG
TCTGAGTGCATTGTTTGATTCGAAAAGGCAAGATGGTCTACTCCACACGACGTGTGGAAC
ACCGGCTTATGTTGCACCAGAGGTGATCAATAAGAGAGGTTATGATGGTGAAAAGGCTGA
TATTTGGTCATGTGGTGTTGTTTTGTTTGTCCTGTTAGCGGGTTATTTGCCATTCCATGA
CCAAAATCTTATGGAAATGTACAAAAAAATAAGCAAAGCAGAATTCAAATGTCCACAATG
GTTCCATCCAGAGGTAAGAAAGTTACTCTCAAGGATTCTTGATCCAAATCCAGGATCAAG
AATCACCTTAATTAAGCTCATGGAGAATTATTGGTTCAAAAAAGGATTCAAACAAGTTGA
TAAAACCCCAAATTCAGGGAAAGATCAACGTGAATCCCCTCGTAGTGTTTTCGATATTGA
GGACAATAATTCAGACGGAGAGGGACCTTCCAATCGCCAAAAGAATCAAGATTCCACAAC
AATGAAGCCTACTTGCTTAAATGCATTTGATATAATCTCTCTTTCCCCTGGTTTCAATCT
TTCTGGATTATTCGAAAAGGAGAAAGAGAGAAGATCAGAAGCGCGATTCACAGCGAAAAA
ACCAGCTTCTATAATAGTGTCAAAATTGGAAGAAGTAGCTTCAAATGAGAGTTTTAATAT
AATGAAAAAAGATGGTACAGTGACAATGCAGAGTAACAAAGAAGGAAGGAAAGGGCAACT
AGCAATTGATGCAGAGATATTCGAAATTACGCCTTCTTTTCATGTTGTGGAAGTGAGTAA
AAAATCAGGGGATACAATGGAATACAAGAAATTCTTTGATCAGGGATTGAAAACATCACT
TAAAGATATTGTTTGGACATGGCAAGATGGTGAACAACAACAACAAGTTGAAAATCAAGA
AAGAATTTGA