Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g072050.1.1
CDS Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

ATGGCTCAATTTAGAATTTCATTTTCTTGGTTCAATTTGCTTTCTCTTTTGCTAATCAAT
GTGTATGTTTTGGGGGTTTTCTCCTTAAGTCTTGATGGAAATGATGACTACATTTCAGCT
GTTGGAGATTCAGGGATGCGACGCGACGGGCTAAGAGTGGCCATAGAGGCATTAAATCAA
TGCAATGAGGTTGGAGAAGAAACCCCAAAAATGGGAAGCCCAAGGGCTGCTGATTGCTTT
GATGTTCAAAACAAAGCCTCTGCTCAGCAACAGAATCCAAACAGGCTGCTACAACATAAA
GTGACTGAGGAAGATAACAAGTTAGGCATAGGAAAATCATTTCCAGGACTGACGAAACGA
GCGTTGAACAACGTAGACCTTTATGCAGCAGAGAAAGAAGTATACTTGGGATCAAAATGT
CAAGTTGATGACAAGCCAAATCCATGGCAATTCTGGACGATCAGGCTTAAGAGTGGTAAC
ATGGATACTCGTGCTGGTAAATGCCCGAAAAATGGACACAAAGTAGGTCCATTCGATCCT
TCTGGCGAATTTGAATGTTTTGGCAAAGGATGTATGAATCAGCCATTGATGTACCACAAT
TACACAACTTTACAAGGGACAACCCTTAAAGGGGAATTTCATGGAACATGGGATTTGAAT
GCTGGTTCGAGTGCAAACATGAACACCTCTTTTTATTCTATACGATGGCAGAAAGAACTA
GGCAAAGGCTGGATTTTTTATCATGTTTTAAGGACCTCAACAAAGTATCCTTGGTTAATG
CTCTACTTAAGATCAGATGCCACTTCTGGTTTTTCTGGTGGATATCATTATCAAACTAGG
GGAATGTCAAAAATTATACCAGAATCACCAAATTTTAAGGTAAAATTCAGATTAGCTGTG
CTGCAAGGTGGAGGTCCTCATAGCCAATTTTATCTGATGGACATAGGGAGTTGTTGGAAG
AACAATGGAAAACCTTGTGATGGAGATGTGACTTCAGATGTAACAAGATACAGTGAAATG
ATCCTGAATCCAGAAACACCATCCTGGTGCAACCCAGATGACTTTAGTTTGTGTCCTCCA
TACCACACATTTCCAAATGGAACAAAAGTTCATCGATCCGACAAGTCTCGTTATCCCTAT
GAGGCTTACCATATGTATTGTACACCAGGGAATGGGGAGCATGTTGAGCAGCCTAGTATA
CCATGTGATCCTTATAGCAATCCTCAACCTCAGGAGATTTTACAGATTTTGCCACATCCT
GTTTGGGGTGAATATGGTTATCCTACTGAGAAAGGACAAGGTTGGATTGGTGATCCAACA
ACTTGGGAGCTTGATGTTGGGAGGCTGTCACAATCCCTTTATTTTTACCAGGATCCAGGC
ACTGCACCAGCGAAGAGGAAGTGGAGTTCAATTGGTTTGGGAGCTGAAATATTTAGAGAT
GCTAATCAAGTGGCAGAATGGACTGTTAGTGATTTTGACATTCTTGTACGGTTGTACAAG
AATTAG

Peptide Sequence

PEP ID

Solyc02g072050.1.1
PEP Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

MAQFRISFSWFNLLSLLLINVYVLGVFSLSLDGNDDYISAVGDSGMRRDGLRVAIEALNQ
CNEVGEETPKMGSPRAADCFDVQNKASAQQQNPNRLLQHKVTEEDNKLGIGKSFPGLTKR
ALNNVDLYAAEKEVYLGSKCQVDDKPNPWQFWTIRLKSGNMDTRAGKCPKNGHKVGPFDP
SGEFECFGKGCMNQPLMYHNYTTLQGTTLKGEFHGTWDLNAGSSANMNTSFYSIRWQKEL
GKGWIFYHVLRTSTKYPWLMLYLRSDATSGFSGGYHYQTRGMSKIIPESPNFKVKFRLAV
LQGGGPHSQFYLMDIGSCWKNNGKPCDGDVTSDVTRYSEMILNPETPSWCNPDDFSLCPP
YHTFPNGTKVHRSDKSRYPYEAYHMYCTPGNGEHVEQPSIPCDPYSNPQPQEILQILPHP
VWGEYGYPTEKGQGWIGDPTTWELDVGRLSQSLYFYQDPGTAPAKRKWSSIGLGAEIFRD
ANQVAEWTVSDFDILVRLYKN*

Transcript Sequence

Transcript ID

Solyc02g072050.1.1
Transcript Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

ATGGCTCAATTTAGAATTTCATTTTCTTGGTTCAATTTGCTTTCTCTTTTGCTAATCAAT
GTGTATGTTTTGGGGGTTTTCTCCTTAAGTCTTGATGGAAATGATGACTACATTTCAGCT
GTTGGAGATTCAGGGATGCGACGCGACGGGCTAAGAGTGGCCATAGAGGCATTAAATCAA
TGCAATGAGGTTGGAGAAGAAACCCCAAAAATGGGAAGCCCAAGGGCTGCTGATTGCTTT
GATGTTCAAAACAAAGCCTCTGCTCAGCAACAGAATCCAAACAGGCTGCTACAACATAAA
GTGACTGAGGAAGATAACAAGTTAGGCATAGGAAAATCATTTCCAGGACTGACGAAACGA
GCGTTGAACAACGTAGACCTTTATGCAGCAGAGAAAGAAGTATACTTGGGATCAAAATGT
CAAGTTGATGACAAGCCAAATCCATGGCAATTCTGGACGATCAGGCTTAAGAGTGGTAAC
ATGGATACTCGTGCTGGTAAATGCCCGAAAAATGGACACAAAGTAGGTCCATTCGATCCT
TCTGGCGAATTTGAATGTTTTGGCAAAGGATGTATGAATCAGCCATTGATGTACCACAAT
TACACAACTTTACAAGGGACAACCCTTAAAGGGGAATTTCATGGAACATGGGATTTGAAT
GCTGGTTCGAGTGCAAACATGAACACCTCTTTTTATTCTATACGATGGCAGAAAGAACTA
GGCAAAGGCTGGATTTTTTATCATGTTTTAAGGACCTCAACAAAGTATCCTTGGTTAATG
CTCTACTTAAGATCAGATGCCACTTCTGGTTTTTCTGGTGGATATCATTATCAAACTAGG
GGAATGTCAAAAATTATACCAGAATCACCAAATTTTAAGGTAAAATTCAGATTAGCTGTG
CTGCAAGGTGGAGGTCCTCATAGCCAATTTTATCTGATGGACATAGGGAGTTGTTGGAAG
AACAATGGAAAACCTTGTGATGGAGATGTGACTTCAGATGTAACAAGATACAGTGAAATG
ATCCTGAATCCAGAAACACCATCCTGGTGCAACCCAGATGACTTTAGTTTGTGTCCTCCA
TACCACACATTTCCAAATGGAACAAAAGTTCATCGATCCGACAAGTCTCGTTATCCCTAT
GAGGCTTACCATATGTATTGTACACCAGGGAATGGGGAGCATGTTGAGCAGCCTAGTATA
CCATGTGATCCTTATAGCAATCCTCAACCTCAGGAGATTTTACAGATTTTGCCACATCCT
GTTTGGGGTGAATATGGTTATCCTACTGAGAAAGGACAAGGTTGGATTGGTGATCCAACA
ACTTGGGAGCTTGATGTTGGGAGGCTGTCACAATCCCTTTATTTTTACCAGGATCCAGGC
ACTGCACCAGCGAAGAGGAAGTGGAGTTCAATTGGTTTGGGAGCTGAAATATTTAGAGAT
GCTAATCAAGTGGCAGAATGGACTGTTAGTGATTTTGACATTCTTGTACGGTTGTACAAG
AATTAG