Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g071980.3.1
CDS Infomation	RING/FYVE/PHD zinc finger-containing protein (AHRD V3.3 *** F4I346_ARATH)
Sequence	ATGGAGCCCCATCACAATTCGGATTCCAAGTTTGCTACTCCAGGAGAAGTTGATCCTTCT TCGACTTCTTATTCTAGGGTTTCTAATCCACTTGTTCAATCGGACTGTAGTAAGTTTGGA GATAACAGAGGCCTGGATGATTTTGATCCAGTCATAGGTTCAAACATTGTAAAAACGGGT AAGCATGAAGAATATAACATAGTAGCTGTACACCTAATGAATGGAACTCCCAAGAACACA AGTTTGATGAGTCGTCTAGATACTCAAGCTGAGGAACTTTTCAGTAAACAGTCATTTCAT GACACTGGAGAAGCTAGTGAGAGGTATCATATGGATGGATGGAAAGGGAAATCTGAAGAA GATTCTATAACTCTGAGACAGAACAATATCTTGAGGAGTTCTGAGAAGATTATTAGCAGC AACTGTGATAAAAGTAGAAAATGTGGTTCCGAATCATTTGGTCAAAGTGCAGGTCATGGA AACAAGGATAAGAGTTATATCATGGGCAAGCCAGTGGGTGGACAGCAAGAAACTGATCAT GATTCACCTTTGTGCACAAAAGAAAACTATGAGAAGGAGGCACACACAACTAATGGAATG GTTAAAGCTGAAGTCTCTAATGTTAATTTAACTCAACAGACTAACGGAAGTGACATAAAA ATAAATCTTCTGTACCCACAATTAGCTGAAAATATAGATTGTGCAACTCAGTCATCTCAA AATGCAGAAGGAAGTATATGCCACCAAAATCAAGAAAAATATTTCTGCTACGATTCGCCA CTTTTTGGTGAAACTGGGGCTTGGATACCTGTATCAGTTCCTCCAATGTCGGAGAGTGAG CATGATGAGTGGAGTAGAGGTTTCTGCTCAAATGGTGGGTACCTTCCTGAAGGTGACACA GATTGGAATCAGTGCATGGGAGAAGACAAGGAGTTGACCATGTGGGATGTGGTTCTGGAT ATGTTGCTCGCAGCACGAGGAAAAGTGCAGTCCCTTGCATCTGGTGATATAGTTGGTAAC ATGTCGTGGATATCAAGCCATCTCATTGAGCAGGCTTGGAAAGAGATGGCTCAAACCCTC ACAGAAGCTAATTTCGGTAATGCCCAGGAAATTCTTGAGGCAGATCCTCCTAAATGGCTG CCTGACAGTGCATCTTCCACTTGTATGTTGTGTAATGTGCGGTTCCACCCTATCATGTGC AGCAGGCATCATTGTCGATTTTGTGGAGGATTATTTTGCAATGAATGTACTAAAGGAAGG AGCTTGCTCCCTGAAAAATTTCGCACTGGGGAACCACAACGAGTATGTGATGTATGTTTT GTACGTCTCGAGTCTGTGCAGCCATACCTAATGGATCAAGTAAGTCGTGCTGCTCAGTTG CCAACCCATGACCTCACTGACTTGAGCACACTGAGATCCTGGGTAAACTTCCCATGGGGA CAGTCAATGGAGTATGAAATTTATAAGGCTGCTAACACTATTCGGGGCTATGAGAAGATT GGTTTATTGAGTTCTGAGAAGAGAATTCCAGAAGCTATTCTACAAAATGCAAGAGGCCTT GCCATTCTTACGGTCGTGAAAGTTGGAGTGATGGTAACCTACAACATCGGAACTGGATTG GTAATTGCACGTAGAGAAGATGGTTCATGGTCTCCCCCGTCGGCCATTTCTTCTTTCGGT GTAGGATGGGGTGCTCAGGTTGGTGGAGAACTTACTGACTTCATTATTGTCCTGAGAACT AGTGATGCTGTCAAGACTTTTGGTGGTGATGCACATCTTTCAGTTGGAGCTGGTGTGAGT GCTGCTGCGGGGATCATTGGACGAACTGCTGAAGCTGATCTTCGTGCCGGTACTGCTGGT TATGCCGCTTGTTATACATACAGCTGCAGTAAAGGTGCCTTTGTTGGGTGTTCCCTGCAA GGGAGTGTTGTGACTACCCGAACACGGGAAAACTCCAGATTTTATGGTAGCCAATCAATA AAAGCTTCAGAAATTCTACTTGGCTCATTGCCAAGACCCCCTGCTGCAGCCGCCCTATAT CGTGCACTGACTGATTTATACCAGAAGCTCTGA

Peptide Sequence

PEP ID	Solyc02g071980.3.1
PEP Infomation	RING/FYVE/PHD zinc finger-containing protein (AHRD V3.3 *** F4I346_ARATH)
Sequence	MEPHHNSDSKFATPGEVDPSSTSYSRVSNPLVQSDCSKFGDNRGLDDFDPVIGSNIVKTG KHEEYNIVAVHLMNGTPKNTSLMSRLDTQAEELFSKQSFHDTGEASERYHMDGWKGKSEE DSITLRQNNILRSSEKIISSNCDKSRKCGSESFGQSAGHGNKDKSYIMGKPVGGQQETDH DSPLCTKENYEKEAHTTNGMVKAEVSNVNLTQQTNGSDIKINLLYPQLAENIDCATQSSQ NAEGSICHQNQEKYFCYDSPLFGETGAWIPVSVPPMSESEHDEWSRGFCSNGGYLPEGDT DWNQCMGEDKELTMWDVVLDMLLAARGKVQSLASGDIVGNMSWISSHLIEQAWKEMAQTL TEANFGNAQEILEADPPKWLPDSASSTCMLCNVRFHPIMCSRHHCRFCGGLFCNECTKGR SLLPEKFRTGEPQRVCDVCFVRLESVQPYLMDQVSRAAQLPTHDLTDLSTLRSWVNFPWG QSMEYEIYKAANTIRGYEKIGLLSSEKRIPEAILQNARGLAILTVVKVGVMVTYNIGTGL VIARREDGSWSPPSAISSFGVGWGAQVGGELTDFIIVLRTSDAVKTFGGDAHLSVGAGVS AAAGIIGRTAEADLRAGTAGYAACYTYSCSKGAFVGCSLQGSVVTTRTRENSRFYGSQSI KASEILLGSLPRPPAAAALYRALTDLYQKL*

Transcript Sequence

Transcript ID	Solyc02g071980.3.1
Transcript Infomation	RING/FYVE/PHD zinc finger-containing protein (AHRD V3.3 *** F4I346_ARATH)
Sequence	TCAACAAACAATGTTAGACCGAGAAAGTAATTAATAATAATAAAATTAGAGACACGTAAG AGGACACGGCAGGAGTTCGATGAGCATCTCATCGTCTAATCAATCAAAACTCTATATTCT CTCCTTCAAAGTCTCATCCAATTTCTCAAAAAGATAAAACTGTAGGAGAAAAAAAAAGAA GATTTATATATATATTGATTATGAGGTAATTTAATTTAATTTATTTATTTATCGACCAAA AGATGTTGAAATAATGGAGCCCCATCACAATTCGGATTCCAAGTTTGCTACTCCAGGAGA AGTTGATCCTTCTTCGACTTCTTATTCTAGGGTTTCTAATCCACTTGTTCAATCGGACTG TAGTAAGTTTGGAGATAACAGAGGCCTGGATGATTTTGATCCAGTCATAGGTTCAAACAT TGTAAAAACGGGTAAGCATGAAGAATATAACATAGTAGCTGTACACCTAATGAATGGAAC TCCCAAGAACACAAGTTTGATGAGTCGTCTAGATACTCAAGCTGAGGAACTTTTCAGTAA ACAGTCATTTCATGACACTGGAGAAGCTAGTGAGAGGTATCATATGGATGGATGGAAAGG GAAATCTGAAGAAGATTCTATAACTCTGAGACAGAACAATATCTTGAGGAGTTCTGAGAA GATTATTAGCAGCAACTGTGATAAAAGTAGAAAATGTGGTTCCGAATCATTTGGTCAAAG TGCAGGTCATGGAAACAAGGATAAGAGTTATATCATGGGCAAGCCAGTGGGTGGACAGCA AGAAACTGATCATGATTCACCTTTGTGCACAAAAGAAAACTATGAGAAGGAGGCACACAC AACTAATGGAATGGTTAAAGCTGAAGTCTCTAATGTTAATTTAACTCAACAGACTAACGG AAGTGACATAAAAATAAATCTTCTGTACCCACAATTAGCTGAAAATATAGATTGTGCAAC TCAGTCATCTCAAAATGCAGAAGGAAGTATATGCCACCAAAATCAAGAAAAATATTTCTG CTACGATTCGCCACTTTTTGGTGAAACTGGGGCTTGGATACCTGTATCAGTTCCTCCAAT GTCGGAGAGTGAGCATGATGAGTGGAGTAGAGGTTTCTGCTCAAATGGTGGGTACCTTCC TGAAGGTGACACAGATTGGAATCAGTGCATGGGAGAAGACAAGGAGTTGACCATGTGGGA TGTGGTTCTGGATATGTTGCTCGCAGCACGAGGAAAAGTGCAGTCCCTTGCATCTGGTGA TATAGTTGGTAACATGTCGTGGATATCAAGCCATCTCATTGAGCAGGCTTGGAAAGAGAT GGCTCAAACCCTCACAGAAGCTAATTTCGGTAATGCCCAGGAAATTCTTGAGGCAGATCC TCCTAAATGGCTGCCTGACAGTGCATCTTCCACTTGTATGTTGTGTAATGTGCGGTTCCA CCCTATCATGTGCAGCAGGCATCATTGTCGATTTTGTGGAGGATTATTTTGCAATGAATG TACTAAAGGAAGGAGCTTGCTCCCTGAAAAATTTCGCACTGGGGAACCACAACGAGTATG TGATGTATGTTTTGTACGTCTCGAGTCTGTGCAGCCATACCTAATGGATCAAGTAAGTCG TGCTGCTCAGTTGCCAACCCATGACCTCACTGACTTGAGCACACTGAGATCCTGGGTAAA CTTCCCATGGGGACAGTCAATGGAGTATGAAATTTATAAGGCTGCTAACACTATTCGGGG CTATGAGAAGATTGGTTTATTGAGTTCTGAGAAGAGAATTCCAGAAGCTATTCTACAAAA TGCAAGAGGCCTTGCCATTCTTACGGTCGTGAAAGTTGGAGTGATGGTAACCTACAACAT CGGAACTGGATTGGTAATTGCACGTAGAGAAGATGGTTCATGGTCTCCCCCGTCGGCCAT TTCTTCTTTCGGTGTAGGATGGGGTGCTCAGGTTGGTGGAGAACTTACTGACTTCATTAT TGTCCTGAGAACTAGTGATGCTGTCAAGACTTTTGGTGGTGATGCACATCTTTCAGTTGG AGCTGGTGTGAGTGCTGCTGCGGGGATCATTGGACGAACTGCTGAAGCTGATCTTCGTGC CGGTACTGCTGGTTATGCCGCTTGTTATACATACAGCTGCAGTAAAGGTGCCTTTGTTGG GTGTTCCCTGCAAGGGAGTGTTGTGACTACCCGAACACGGGAAAACTCCAGATTTTATGG TAGCCAATCAATAAAAGCTTCAGAAATTCTACTTGGCTCATTGCCAAGACCCCCTGCTGC AGCCGCCCTATATCGTGCACTGACTGATTTATACCAGAAGCTCTGAATATACATCTTTAA GTGTGTTGTACATAACGTTTGGGTTCAAAATTTGGACTTGATTACTGTTATTCTTTGTGA ATTATGATTAAATAGATATAGTGATTTGTAGAGTCTGGCTGGCAGAAAGAAAAATTGTAA ATATAATCATGATCTTTGCTTGGAGAATATTCAAGCTCAATTAAATCTATTGGCAATTTG GCATTCACTATGGAAAGGGAAAAAATGGATGAAAAGAACTGTGATTC