Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g071780.3.1
CDS Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

ATGGAGGATTCAAACCCCAAGAAGAGTTTTGCCTCAGATGCTTTAATTACTACTCTCAGC
AACTCAATCCAAGCTCTGGGTAGGGGATTTGATGTCACTTCGGATATTAGGCTTTTGTAT
TGTAAAGGGGCTCCAGGGTCTCGTTTAGTTCATCTTGATGAGGAAAATCGTGTGGATCTT
TTGCACCCAGATGGGGGTATTTTGCTGCCAAATGTTACTGTAGACATTGAATGTTCACAA
GAGTTGAGAACCATTGAGGCCACACCTGTTTTTACCTTCCATGAGATGGCAAAGTACTTC
AATGCAATCTCCAATATATTTGGAGATGTCCCACTTGGAAGCTTTAACTCCATGTTTAAC
TTCACTGGTTCATGGCAACAAGATGCGGCAGCTACTAAATCCCTTGCCATGATTGGACAT
GTTATCCCACTATTTACAGTGAGATTAGTTAAGTTTGATTTACTTCTACGAGATGAAATC
AAGCGTGCTGTTCCATACTCTTGGGATCCTGCATCACTGGCAAGCTTTATTGAAAACTAT
GGCACCCATATTGTCACCTCCGCAACGATCGGTGGTAGGGATGTAGTTTATATTAAACAA
CACCAGTCATCTCCTTTGTTAGTTTCAGAAATTGAAAACTATGTGAACGACATTGGAGAG
CAGAGGTTCTCTGATTCGAAGAATCTCTCAAGTGCTGGACCTTTAAGATATAAGGACAAG
GATGTTACAGTTATTTTTCGCAGAAGAGGAGGTGATGACCTGGAGCAGAGTCACGACAAG
TGGGCAAGCACTGTAGAAACATCACCAGATGTGATCAACATGACTTTTACTCCCATTGTG
TCATTTCTTGAAGAGGTGCCTGGAATTAAGTACCTGAGCCGCGCAATTGAGTTATACTTA
GAATACAAGCCACCAATAGAAGATTTACAGTATTTCTTAGATTTCCAAATAGCTCGTGTG
TGGGCTCCAGAGCAAAATAACCTTCAAAGAAAGGAGCCTGTATGTTTATCCCTACAGTTC
AGTTTGATGGGTCCTAAGCTCTATATTAGCCCGGATCAGGTGACAGTGGGCCGTAAGCCA
GTGACTGGGCTCAGGCTCAGCCTAGAAGGTGACAAGCAGAACCGTCTTTCAGTCAATTTG
CAGCATCTGGTTTCTCTTCCCAAGATCCTTCAACCCCACTGGGATTCACACATGGCTATA
GGTGCCCCAAAATGGAAAGGCCCCGAAGAGCAGGATAGCAGATGGTTCGAACCAATCAAA
TGGAAAAATTTCTCCCACGTAAGCACAGCACCAATTGAACATACTGAGACTTCCATTGGA
GATCTCTCTGGTGTTCACATTGTGACGGGGGCTCAGCTTGGTGTTTGGAATTTTGGTGCC
AAAAGTGTCTTGCATCTTAAACTCCTCTTTTCCAAAGTACCTGGCTGCACAATAAGAAGA
TCGGTATGGGATCACAGTCCATCAAACCTATCAGCAGTACAAAGGATTGATGGTTCTTCA
ACTTCACTTCAGAATGAAAACAAGAAAGGCGATACTTCCAGCCAAACAGGGAAATTGGCA
AAAATTGTAGACATGACAGAAATGTCAAAGGGGCCACAGGATGCACCAGGACACTGGTTG
GTAACAGGAGCTAAACTTGGAGTTGATAAAGGAAAAATTGTGCTAAGAGTGAAGTATTCC
CTGCTGAATTATTAA

Peptide Sequence

PEP ID

Solyc02g071780.3.1
PEP Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

MEDSNPKKSFASDALITTLSNSIQALGRGFDVTSDIRLLYCKGAPGSRLVHLDEENRVDL
LHPDGGILLPNVTVDIECSQELRTIEATPVFTFHEMAKYFNAISNIFGDVPLGSFNSMFN
FTGSWQQDAAATKSLAMIGHVIPLFTVRLVKFDLLLRDEIKRAVPYSWDPASLASFIENY
GTHIVTSATIGGRDVVYIKQHQSSPLLVSEIENYVNDIGEQRFSDSKNLSSAGPLRYKDK
DVTVIFRRRGGDDLEQSHDKWASTVETSPDVINMTFTPIVSFLEEVPGIKYLSRAIELYL
EYKPPIEDLQYFLDFQIARVWAPEQNNLQRKEPVCLSLQFSLMGPKLYISPDQVTVGRKP
VTGLRLSLEGDKQNRLSVNLQHLVSLPKILQPHWDSHMAIGAPKWKGPEEQDSRWFEPIK
WKNFSHVSTAPIEHTETSIGDLSGVHIVTGAQLGVWNFGAKSVLHLKLLFSKVPGCTIRR
SVWDHSPSNLSAVQRIDGSSTSLQNENKKGDTSSQTGKLAKIVDMTEMSKGPQDAPGHWL
VTGAKLGVDKGKIVLRVKYSLLNY*

Transcript Sequence

Transcript ID

Solyc02g071780.3.1
Transcript Infomation

MACPF domain protein (AHRD V3.3 *** G7ILM1_MEDTR)
Sequence

AGAAAACTAGAGATTACTATCCATTGAACCAAAACAAAGCATAAAGTTTCAATCTTTATT
GATAATTTTTGGAATTGGGATGAAGAACAAGTTGTCATCAATACTACTCTGCTGTGTTTG
TTGCCAATAAACAATCTTTGTATGGAGGATTCAAACCCCAAGAAGAGTTTTGCCTCAGAT
GCTTTAATTACTACTCTCAGCAACTCAATCCAAGCTCTGGGTAGGGGATTTGATGTCACT
TCGGATATTAGGCTTTTGTATTGTAAAGGGGCTCCAGGGTCTCGTTTAGTTCATCTTGAT
GAGGAAAATCGTGTGGATCTTTTGCACCCAGATGGGGGTATTTTGCTGCCAAATGTTACT
GTAGACATTGAATGTTCACAAGAGTTGAGAACCATTGAGGCCACACCTGTTTTTACCTTC
CATGAGATGGCAAAGTACTTCAATGCAATCTCCAATATATTTGGAGATGTCCCACTTGGA
AGCTTTAACTCCATGTTTAACTTCACTGGTTCATGGCAACAAGATGCGGCAGCTACTAAA
TCCCTTGCCATGATTGGACATGTTATCCCACTATTTACAGTGAGATTAGTTAAGTTTGAT
TTACTTCTACGAGATGAAATCAAGCGTGCTGTTCCATACTCTTGGGATCCTGCATCACTG
GCAAGCTTTATTGAAAACTATGGCACCCATATTGTCACCTCCGCAACGATCGGTGGTAGG
GATGTAGTTTATATTAAACAACACCAGTCATCTCCTTTGTTAGTTTCAGAAATTGAAAAC
TATGTGAACGACATTGGAGAGCAGAGGTTCTCTGATTCGAAGAATCTCTCAAGTGCTGGA
CCTTTAAGATATAAGGACAAGGATGTTACAGTTATTTTTCGCAGAAGAGGAGGTGATGAC
CTGGAGCAGAGTCACGACAAGTGGGCAAGCACTGTAGAAACATCACCAGATGTGATCAAC
ATGACTTTTACTCCCATTGTGTCATTTCTTGAAGAGGTGCCTGGAATTAAGTACCTGAGC
CGCGCAATTGAGTTATACTTAGAATACAAGCCACCAATAGAAGATTTACAGTATTTCTTA
GATTTCCAAATAGCTCGTGTGTGGGCTCCAGAGCAAAATAACCTTCAAAGAAAGGAGCCT
GTATGTTTATCCCTACAGTTCAGTTTGATGGGTCCTAAGCTCTATATTAGCCCGGATCAG
GTGACAGTGGGCCGTAAGCCAGTGACTGGGCTCAGGCTCAGCCTAGAAGGTGACAAGCAG
AACCGTCTTTCAGTCAATTTGCAGCATCTGGTTTCTCTTCCCAAGATCCTTCAACCCCAC
TGGGATTCACACATGGCTATAGGTGCCCCAAAATGGAAAGGCCCCGAAGAGCAGGATAGC
AGATGGTTCGAACCAATCAAATGGAAAAATTTCTCCCACGTAAGCACAGCACCAATTGAA
CATACTGAGACTTCCATTGGAGATCTCTCTGGTGTTCACATTGTGACGGGGGCTCAGCTT
GGTGTTTGGAATTTTGGTGCCAAAAGTGTCTTGCATCTTAAACTCCTCTTTTCCAAAGTA
CCTGGCTGCACAATAAGAAGATCGGTATGGGATCACAGTCCATCAAACCTATCAGCAGTA
CAAAGGATTGATGGTTCTTCAACTTCACTTCAGAATGAAAACAAGAAAGGCGATACTTCC
AGCCAAACAGGGAAATTGGCAAAAATTGTAGACATGACAGAAATGTCAAAGGGGCCACAG
GATGCACCAGGACACTGGTTGGTAACAGGAGCTAAACTTGGAGTTGATAAAGGAAAAATT
GTGCTAAGAGTGAAGTATTCCCTGCTGAATTATTAATAAGTTGTGTTGTCTGTGAGATTA
AAGCATTCTTTGGATAGTTTAGATATCATGTTATTCTTCTGTAAATTATGTTTAGCATTG
ATCATTCATTTTTGTTATTGCTATTTTATAGCCACCAGATCAGTGTACTACTCCGGGTGC
ATACAGTGAAAA