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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g071480.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

ATGGATTCAACGCCGGCAAATATGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAA
GAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATATCTGCTCAGAGCAAGAA
ACTCCGGTCATATCCACCGGAGCGTCGGTTCCAGTTATCGATATTCAAAAGTTGATTTCA
GGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACACTGGGGTTTC
CTACAGGTCATAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTT
ATTCAATTGTTCAAACTTCCAACGGAAGAAAAGAGGAAACTATGGCAACAAGAAGACAGC
TTTGAAGGTTTTGGGAGTGTATTCGTTGCATCGGAGGAGCAGAAGCTTGATTGGAGTGAC
ATGTTTGTCATAGTAACTCTTCCTCCTCATCTCCGCAAAGTGGACTTGTTTCACGAGTTG
CCTTCAAAGCTCAGAAATCAAGAACCTTGCAATGATTATCGCGTGTCAATTGGCAAAGGC
TTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTGTACAGTCAATGAGG
ATGAATTATTATCCTCCTTGCCCTGAACCAGACAGGGCAATTGGCTTAAGTCCTCATTCT
GATGCGGATGCCCTCACCATCCTTCTCCAGCTAAATGAAACTGAAGGTCTCCAAGTCCGA
AAAGACGGCATTTGGGTGCCTATAAAGCCACTCCCAAATGCTTTGATTGTCAATATTGGG
GATATGATGGAGATATTGAGCAATGGTATCTATAAAAGCATTGAGCATAGAGCAATTGTA
AACTCAAACAAAGAGAGGCTATCTGTTGCAACATTCTCTACCTTCAACCTCGATTCCGAA
TTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCTCCAATTTTCCGAAGAGTTGTC
GTGCAAAAAAATATTTACAGTACTTTTTTGCACGAAAACTTGACGGAAAATCATACCTTG
ATTTCATGA

Peptide Sequence

PEP ID

Solyc02g071480.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

MDSTPANMNFGKSLLVPSVQELAKQHLTNIPDRYICSEQETPVISTGASVPVIDIQKLIS
GDSMDSELQKLHSACQHWGFLQVINHGVTPSLLEDFKREVIQLFKLPTEEKRKLWQQEDS
FEGFGSVFVASEEQKLDWSDMFVIVTLPPHLRKVDLFHELPSKLRNQEPCNDYRVSIGKG
LRMDEKEMRDLFSDGVQSMRMNYYPPCPEPDRAIGLSPHSDADALTILLQLNETEGLQVR
KDGIWVPIKPLPNALIVNIGDMMEILSNGIYKSIEHRAIVNSNKERLSVATFSTFNLDSE
LGPAHSLIGTNNPPIFRRVVVQKNIYSTFLHENLTENHTLIS*

Transcript Sequence

Transcript ID

Solyc02g071480.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

ACAAAATGTATATATCTTCATATATACAAAAATTTGAAATTTGCAAGAAATTCATAAAAC
CCAAATTAATTTTCAAGTGCAATGGATTCAACGCCGGCAAATATGAACTTTGGAAAATCT
CTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGG
TATATCTGCTCAGAGCAAGAAACTCCGGTCATATCCACCGGAGCGTCGGTTCCAGTTATC
GATATTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCT
GCTTGCCAACACTGGGGTTTCCTACAGGTCATAAACCATGGAGTGACACCTTCGTTACTG
GAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAACGGAAGAAAAGAGGAAA
CTATGGCAACAAGAAGACAGCTTTGAAGGTTTTGGGAGTGTATTCGTTGCATCGGAGGAG
CAGAAGCTTGATTGGAGTGACATGTTTGTCATAGTAACTCTTCCTCCTCATCTCCGCAAA
GTGGACTTGTTTCACGAGTTGCCTTCAAAGCTCAGAAATCAAGAACCTTGCAATGATTAT
CGCGTGTCAATTGGCAAAGGCTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGT
GATGGTGTACAGTCAATGAGGATGAATTATTATCCTCCTTGCCCTGAACCAGACAGGGCA
ATTGGCTTAAGTCCTCATTCTGATGCGGATGCCCTCACCATCCTTCTCCAGCTAAATGAA
ACTGAAGGTCTCCAAGTCCGAAAAGACGGCATTTGGGTGCCTATAAAGCCACTCCCAAAT
GCTTTGATTGTCAATATTGGGGATATGATGGAGATATTGAGCAATGGTATCTATAAAAGC
ATTGAGCATAGAGCAATTGTAAACTCAAACAAAGAGAGGCTATCTGTTGCAACATTCTCT
ACCTTCAACCTCGATTCCGAATTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCT
CCAATTTTCCGAAGAGTTGTCGTGCAAAAAAATATTTACAGTACTTTTTTGCACGAAAAC
TTGACGGAAAATCATACCTTGATTTCATGAAGGTAGAGGCAAGGAATGGAGAATCCTAGG
TAGCATTTGATATTTGATATATAATTTACTCTTGTCATTGAAATTTGGAGTTCCCCTGTT
TGATTACTGTAAATAAGAGGAATATAGTACTCTTCATCAATTTCATTGTATGTGACAGGT
TTTTATTTATTAT