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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g071450.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

ATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAA
GAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAA
ACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCA
GGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTC
CTACAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTT
ATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGC
TTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGAC
AGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTG
CCCTCGAAGCTCAGGGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACG
AGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTA
TTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGAC
AAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCCATCACCATCCTCTTCCAGCTC
AATGAAACTGAAGGTCTCCAAATCCGGAAAGACGATGTTTGGGTGCCTATAAGGCCCCTC
CCAAATGCGTTGATTGTGAATATTGGGGATATGATGGAGATAGTGAGCAATGGTGTCTAT
AGGAGCATTGAGCATAGAGCAATCGTAAACTCAAATGAAGAACGTCTCTCTGTTGCAACA
TTCTGTGCGTTCAACCTTGAGTCTGAGCTAGGACCTGCACACAGCCTCGTTGGACCATGT
AATCCTCCTATTTTCCGAAGAGTTCCCATGCACAAATATTTACAGGACTTTTTTGCACGA
AAACTTGAAGGAAAGTCATACCTTGATTCCATGAAGGTAGAGGCAAAGGATGATAAATCC
TAG

Peptide Sequence

PEP ID

Solyc02g071450.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

MDSTPEKLNFGKSLLVPSVQELAKQHLTIIPDRYLRPEQETPVISAGAEVPVIDVQKLIS
GDSMDSELQKLHSACQQWGFLQVINHGVTPLLLEDFKREVIELFKLPMEEKKKLWKQEDS
LEGFGHAFVVSEDQKLDWSDRFGILTLPPHIRKVDLFQKLPSKLRDIMEAYCKEIKSLAT
SIICQLAKALRMDEEEMRDLFNDGMQTLRMNYYPPCPEPDKAIGISPHSDADAITILFQL
NETEGLQIRKDDVWVPIRPLPNALIVNIGDMMEIVSNGVYRSIEHRAIVNSNEERLSVAT
FCAFNLESELGPAHSLVGPCNPPIFRRVPMHKYLQDFFARKLEGKSYLDSMKVEAKDDKS
*

Transcript Sequence

Transcript ID

Solyc02g071450.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G25300.1)
Sequence

TACCCTAATTTTGGAGAAATTGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAA
GTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGT
TAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATC
TCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATG
TTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTT
GCCAACAATGGGGTTTCCTACAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGG
ACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTAT
GGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGA
AACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGG
ATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGGATATCATGGAAGCATACTGCAAAGAAA
TTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAG
AGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGC
CTTGCCCTGAGCCAGACAAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCCATCA
CCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAATCCGGAAAGACGATGTTTGGG
TGCCTATAAGGCCCCTCCCAAATGCGTTGATTGTGAATATTGGGGATATGATGGAGATAG
TGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATCGTAAACTCAAATGAAGAAC
GTCTCTCTGTTGCAACATTCTGTGCGTTCAACCTTGAGTCTGAGCTAGGACCTGCACACA
GCCTCGTTGGACCATGTAATCCTCCTATTTTCCGAAGAGTTCCCATGCACAAATATTTAC
AGGACTTTTTTGCACGAAAACTTGAAGGAAAGTCATACCTTGATTCCATGAAGGTAGAGG
CAAAGGATGATAAATCCTAGGTAACATTTGATATAGTATAAGTTAGTTACTCTTGCTGTT
GTAATCTGGTGTTCCCCTGTTTGATTACTACAAAGAATAAAAATATTGTACTCTTCATTT
CATAAAATGTGACTTGTATATTGAGAATATAAATTGTTTTTTTGGTTGTTCTATTATATT
GGCATAAAA