Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g071380.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G17010.1)
Sequence

ATGAGAGACATAGAAGTCAAGTACATGGAAGTTCCTTCTGTACAGGAACTGGCCAAGAAG
AAACTCGTGTCGATTCCATCGCGATACGTACGCGATGATCAAGACCGTTCAATTGCATCA
TCAATTTATAAAGAAGTCCCAGTAATTGATATGCAACGATTGATCAACTTTAATGATCAT
GACTCCATGAATCTTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTT
CAGTTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAA
AAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACA
GATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTC
TTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTT
TCACTTAGAGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTA
TTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAA
GAAGGAATGCAATCGATGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTG
ATGGGACTTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTTAATGAA
ACTCAAGGTCTTCAAATTAAAAAAGATGGAATTTGGATCCCCATTGAACCACTCCCTAAT
GCCTTCATAGTCAATGTTGGAGATGCTTTTGAGATTTTCTCAAATGGAATATACAAAAGC
ATAGAACATAGATCAGTGGTGAGCTCAGAAAAAGAAAGGATTTCAGTAGCAACATTTCAG
AGTCCAAGATTGGATGGTATATTAGGTCCATCAAGTAGCCTTGTTACACCTCAAAATCCA
CCAAAATTCAAAAAAATTGGAGTCACTCAATTTTATAAAGGATTTTTCACACGTGAACTT
GATGGGAAATCATATGTGGACACCATGAGAATCACCAATGAAGATGATCTAAACAATTAG

Peptide Sequence

PEP ID

Solyc02g071380.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G17010.1)
Sequence

MRDIEVKYMEVPSVQELAKKKLVSIPSRYVRDDQDRSIASSIYKEVPVIDMQRLINFNDH
DSMNLELNKLHLAAKDWGFFQLINHGVSCSVVEKMKDETQKFFDLPLEEKKKFEKSSGDT
DGFGQLFVVSDEQKLDWADLFYLKTSPTYLRKPVFSKLYLSLRETIEEYADEIKKLSMRV
LETLGKALGIDEDEVKSVFKEGMQSMRMNYYPPCPQPEKVMGLTPHSDATGLTILLQVNE
TQGLQIKKDGIWIPIEPLPNAFIVNVGDAFEIFSNGIYKSIEHRSVVSSEKERISVATFQ
SPRLDGILGPSSSLVTPQNPPKFKKIGVTQFYKGFFTRELDGKSYVDTMRITNEDDLNN*

Transcript Sequence

Transcript ID

Solyc02g071380.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G17010.1)
Sequence

TTGGAACACCATAGAATTAAGCAGTTAAACAAATATGAGAGACATAGAAGTCAAGTACAT
GGAAGTTCCTTCTGTACAGGAACTGGCCAAGAAGAAACTCGTGTCGATTCCATCGCGATA
CGTACGCGATGATCAAGACCGTTCAATTGCATCATCAATTTATAAAGAAGTCCCAGTAAT
TGATATGCAACGATTGATCAACTTTAATGATCATGACTCCATGAATCTTGAGCTTAACAA
GTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAGTTGATTAATCATGGAGTTAGTTG
TTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGA
GAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGT
CTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATA
TTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAGAGAGACGATTGAAGAGTA
CGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGG
GATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGATGAGGATGAA
TTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTCATTCAGATGC
AACAGGCCTTACAATACTTCTTCAAGTTAATGAAACTCAAGGTCTTCAAATTAAAAAAGA
TGGAATTTGGATCCCCATTGAACCACTCCCTAATGCCTTCATAGTCAATGTTGGAGATGC
TTTTGAGATTTTCTCAAATGGAATATACAAAAGCATAGAACATAGATCAGTGGTGAGCTC
AGAAAAAGAAAGGATTTCAGTAGCAACATTTCAGAGTCCAAGATTGGATGGTATATTAGG
TCCATCAAGTAGCCTTGTTACACCTCAAAATCCACCAAAATTCAAAAAAATTGGAGTCAC
TCAATTTTATAAAGGATTTTTCACACGTGAACTTGATGGGAAATCATATGTGGACACCAT
GAGAATCACCAATGAAGATGATCTAAACAATTAGTTAGATATCTCGATTTGAGTATATAT
CTGAATTCTTATAATGCTGTAAGATGTTATATTAAGATGTCAAGACTAAAAATTTATGAC
TCTTTATATTTTTGAATATGTAAAAAAATTATATGATGATTTTGGATGTCTATTGTATTA
AGATTTCAATACTATAAATTAATATTATTCATATGTAAAAAATTATATGATGATTGTGGA
TGTCGATTGAAGATGATGTACCTTATCTAATAATTACGAGTTAAATTATTTTTCGAATTA
TCAATAAATATATGACGATTTCTTCT