Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g071040.3.1
CDS Infomation	Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** A0A0V0IXC3_SOLCH)
Sequence	ATGGAGATGAAGATCTCTAATTGTTTTCCCACGCAAAAATGGTGCGGAGGAGCATCTCTT TCTAGACAAGTAAATGTTCGATTCTATCCACTACCTTCTCAACGCTTGCCTCCAGCTTCC GGCAAAATGCGCCAGCGCCGCAATTTTAGTTTGCAGAATAAGAAAAAACAAACCAAGACA ATAAATATCGAACGCCCACCAGATGTTGATCTACAGTTAAGTGATGATATAGATTCTGAT ACTGAAAAGATGTCCAAACAAAGCCTATCAAATTCAAATCAGGAAGTTCCCATCGAAGAA AATGTTGACACTTCGACGGAAACCAAAAGTTCAGATGAGAGTACTTATTCGTCTGTCGAC TCAAATGAGGAGGGACAACCTTCAAGTGTTCATCTTAAGGATTTGATTGGCATGATAAGA AATGCGGAAAAGAATATTCATCTACTCAATGAAGCTCGGGTCCATGCGTTAGAAGAACTT CAAAAAGTTCTTGGAGAGAAAGAGGATTTGCATGGGAAGATCAATATCTTAGAAATGAAG CTAGCAGAAACTGATGCACGGCTCAGAGTTGCTTCCCAAGAAAAAATACACGTGGAACTT CTAGAAGACCAGTTGGGAAAGCTAAAAAATGAGTTGTCTAGCAGCAGAGGCAGTGAGGAA AATGTGCTTCATGTGAATAATTCAGTTCCTCTTTCACGTAGTGATCTTGTAAATTCCTTG AGTGAGCAATGTGATTCGTTAAGGAAAGAAAATATGTTATTGAAGCAAGATCTTCAATCG ATGAAGTCAGAGCTTAGCTTAGTCAAGGAAACAGATGAACGCATTTTAATGCTAGAGAAA GAACGATCAGTTCTTGAATCTTCTTTAAGTGAGTTGGAATCTAAACTGGCTGCATCTCAG GAAGGTGTTTCGGAGCTCTCTGCCTTGAAATTGGAGTGCAAAAATTTATATGAAAAGGTG GAACACTTACAAGCATTGCTAGCTAAGGCAACCAAACAAGCAGATCAAGCAATATCAGTG CTACAGCAAAACCAAGAGCTGCGGAAAAAGGTCGACAGGCTTGAAGAATCTCTTGAAGAG GCTAGCATCTATAAACTTTCATCTGAAAAATTACAGCAGTATAATGAACAAATGCAGCAA AAGATAAAACTTCTTGATGAACGCCTTCAGAGGTCTGATGAAGAGATACAATCTTATGTT CAGCTGCATCAGGATTCTGTCAAGGAGTTTCAAGATACACTTGATAATTTGAAAAATGAA ACTAAAAAAAAAGCTCTCGATGAACCTGTAGACGAGATGCCTTCTGAATTTTGGAGTCGG TTATTGCTGATGATTGAAGGTTGGTCTATGGAAAAGAAAATCTCAAAGGATGATGCAAAG TTGTTAAGAGAACTGGTCTGGAAGAGAGATAGACGTATTTGTGATGCATATATGTCATGC AAGGAAAAGAATGATCGTGAAATTCTAGCGGCATTTCTTAGATTTACTTCATCACCAACA CGTCCAGGACTGCATATCATCCATATTGCAGCCGAGATGGCGCCTGTTGCGAAGGTAGGT GGTCTAGGGGATGTGGTGGCAGGTCTTGGCAAAGCTCTGCAGGAAAAAGGACACCTTGTG GAAATTGTTCTTCCTAAATATGATTGTATGCAGTATGAGTCAATCAAGGACATGAAGGTC TTAGATGTGGTGGTTGAGTCATATTTTGATGGTCGGTTATACAACAATAATATCTGGACG GGCACTGTTGAAGGCCTTCCAGTTTATTTTATTGAACCTCAGCACCCTGGTAAATTCTTC TGTAGAGGACAACTTTATGGAGAGCACGATGATTTCAAACGATTTTCATTCTTTAGTAGG GTAGCACTTGAATTTCTACTTCAGGCTGAAAAGAGACCAGATATAATTCATTGCCATGAT TGGCAAACAGCTTTTGTTGCACCACTTTATTGGGAAATATATGTGCCAAAAGGATTGGAC TCAGCGAGGATTTGCTTTACATGCCATAATTTTGAGTATCAAGGGACTGCACCGGCATCA GAATTAACATCTTGCGGTCTTGATGCTTATCACTTGAACAGACCAGATAGGATGCAGGAC AATTCAGCAAATGATAGAATAAATCCCGTGAAGGGTGCAATTGTGTTCTCTAACATTGTT ACCACAGTTTCACCAACTTATGCTCAAGAGGTCCGCTCTGTTCAGGGAGGAAAAGGACTT CATGCAACAATTAACTCCCATTCTAAGAAATTTGCTGGAATTCTAAATGGAATCGATACT GCTGCTTGGAATCCTGCTTCTGATAATTTTCTTAAGGTCCAATACAGTGCCAGTGACATA GATGGAAAAATAGAAAATAAAGAAGCTTTAAGAAGACTTCTAGGGCTCTCTTCTTCTGAC TTTAGACAACCATTGGTTGGTTGCATAACAAGACTGGTTCCTCAAAAGGGTGTGCATCTT ATTAGACATGCCGTATATAGGACTTTGGAGTTGGGAGGTCAATTTGTTCTTCTTGGTTCT AGCCCAGTGCCGCATATTCAGAGGGAATTTGAGGATATTGCGAACCATTTCCAAAATCAC GAACATGCTCGGTTGGTATTGAAGTATGATGAGGCTCTTTCCCATTTGATATATGCAGCA TCTGACATGCTTATTATCCCTTCCATCTTTGAGCCTTGCGGTCTTACTCAGATGATAGCA ATGAGATATGGGTCGATACCAATAGCTAGGAAAACAGGGGGCTTGAATGATAGTGTTTTT GATGTTGACGATGACTCAATCCCACTTCAGTTTAGAAATGGATTCACATTTGCGACTGCT GATGAACAGGGATTCAACAATGCTTTGGAACGTGCATTTAACTATTATATGAACAATTAT GAGATCTGGAAAGAGTTTGTTCAGAAGGACATGAGCATAGATTTTAGTTGGGATTCATCA GCATCACAATATGAAGAACTTTACGAGAAGGCTGTGTTGAGAGCAAGAGCTGCAAGTCGT AATTGA

Peptide Sequence

PEP ID	Solyc02g071040.3.1
PEP Infomation	Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** A0A0V0IXC3_SOLCH)
Sequence	MEMKISNCFPTQKWCGGASLSRQVNVRFYPLPSQRLPPASGKMRQRRNFSLQNKKKQTKT INIERPPDVDLQLSDDIDSDTEKMSKQSLSNSNQEVPIEENVDTSTETKSSDESTYSSVD SNEEGQPSSVHLKDLIGMIRNAEKNIHLLNEARVHALEELQKVLGEKEDLHGKINILEMK LAETDARLRVASQEKIHVELLEDQLGKLKNELSSSRGSEENVLHVNNSVPLSRSDLVNSL SEQCDSLRKENMLLKQDLQSMKSELSLVKETDERILMLEKERSVLESSLSELESKLAASQ EGVSELSALKLECKNLYEKVEHLQALLAKATKQADQAISVLQQNQELRKKVDRLEESLEE ASIYKLSSEKLQQYNEQMQQKIKLLDERLQRSDEEIQSYVQLHQDSVKEFQDTLDNLKNE TKKKALDEPVDEMPSEFWSRLLLMIEGWSMEKKISKDDAKLLRELVWKRDRRICDAYMSC KEKNDREILAAFLRFTSSPTRPGLHIIHIAAEMAPVAKVGGLGDVVAGLGKALQEKGHLV EIVLPKYDCMQYESIKDMKVLDVVVESYFDGRLYNNNIWTGTVEGLPVYFIEPQHPGKFF CRGQLYGEHDDFKRFSFFSRVALEFLLQAEKRPDIIHCHDWQTAFVAPLYWEIYVPKGLD SARICFTCHNFEYQGTAPASELTSCGLDAYHLNRPDRMQDNSANDRINPVKGAIVFSNIV TTVSPTYAQEVRSVQGGKGLHATINSHSKKFAGILNGIDTAAWNPASDNFLKVQYSASDI DGKIENKEALRRLLGLSSSDFRQPLVGCITRLVPQKGVHLIRHAVYRTLELGGQFVLLGS SPVPHIQREFEDIANHFQNHEHARLVLKYDEALSHLIYAASDMLIIPSIFEPCGLTQMIA MRYGSIPIARKTGGLNDSVFDVDDDSIPLQFRNGFTFATADEQGFNNALERAFNYYMNNY EIWKEFVQKDMSIDFSWDSSASQYEELYEKAVLRARAASRN*

Transcript Sequence

Transcript ID	Solyc02g071040.3.1
Transcript Infomation	Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** A0A0V0IXC3_SOLCH)
Sequence	TTATAATCACGAAAAATGAAATCACATATGCACTCCATGAAGCATAGCGTAGTAATGAAT CATCCTCTTATATTTCACCTAGTCCGAGATATTTCCCCTCTTTTTCTTCGCCGAGTCCTT AGATTGGTGCACTTGTTTTCGGAAGAAAAAAATAAGAATAAGAAAGAAGATATGTGCACT TTTTATTAACACACACCCAAATAGTTTTCAGGGAGTCGTTGGTTCTAAGAAACGATGGAG ATGAAGATCTCTAATTGTTTTCCCACGCAAAAATGGTGCGGAGGAGCATCTCTTTCTAGA CAAGTAAATGTTCGATTCTATCCACTACCTTCTCAACGCTTGCCTCCAGCTTCCGGCAAA ATGCGCCAGCGCCGCAATTTTAGTTTGCAGAATAAGAAAAAACAAACCAAGACAATAAAT ATCGAACGCCCACCAGATGTTGATCTACAGTTAAGTGATGATATAGATTCTGATACTGAA AAGATGTCCAAACAAAGCCTATCAAATTCAAATCAGGAAGTTCCCATCGAAGAAAATGTT GACACTTCGACGGAAACCAAAAGTTCAGATGAGAGTACTTATTCGTCTGTCGACTCAAAT GAGGAGGGACAACCTTCAAGTGTTCATCTTAAGGATTTGATTGGCATGATAAGAAATGCG GAAAAGAATATTCATCTACTCAATGAAGCTCGGGTCCATGCGTTAGAAGAACTTCAAAAA GTTCTTGGAGAGAAAGAGGATTTGCATGGGAAGATCAATATCTTAGAAATGAAGCTAGCA GAAACTGATGCACGGCTCAGAGTTGCTTCCCAAGAAAAAATACACGTGGAACTTCTAGAA GACCAGTTGGGAAAGCTAAAAAATGAGTTGTCTAGCAGCAGAGGCAGTGAGGAAAATGTG CTTCATGTGAATAATTCAGTTCCTCTTTCACGTAGTGATCTTGTAAATTCCTTGAGTGAG CAATGTGATTCGTTAAGGAAAGAAAATATGTTATTGAAGCAAGATCTTCAATCGATGAAG TCAGAGCTTAGCTTAGTCAAGGAAACAGATGAACGCATTTTAATGCTAGAGAAAGAACGA TCAGTTCTTGAATCTTCTTTAAGTGAGTTGGAATCTAAACTGGCTGCATCTCAGGAAGGT GTTTCGGAGCTCTCTGCCTTGAAATTGGAGTGCAAAAATTTATATGAAAAGGTGGAACAC TTACAAGCATTGCTAGCTAAGGCAACCAAACAAGCAGATCAAGCAATATCAGTGCTACAG CAAAACCAAGAGCTGCGGAAAAAGGTCGACAGGCTTGAAGAATCTCTTGAAGAGGCTAGC ATCTATAAACTTTCATCTGAAAAATTACAGCAGTATAATGAACAAATGCAGCAAAAGATA AAACTTCTTGATGAACGCCTTCAGAGGTCTGATGAAGAGATACAATCTTATGTTCAGCTG CATCAGGATTCTGTCAAGGAGTTTCAAGATACACTTGATAATTTGAAAAATGAAACTAAA AAAAAAGCTCTCGATGAACCTGTAGACGAGATGCCTTCTGAATTTTGGAGTCGGTTATTG CTGATGATTGAAGGTTGGTCTATGGAAAAGAAAATCTCAAAGGATGATGCAAAGTTGTTA AGAGAACTGGTCTGGAAGAGAGATAGACGTATTTGTGATGCATATATGTCATGCAAGGAA AAGAATGATCGTGAAATTCTAGCGGCATTTCTTAGATTTACTTCATCACCAACACGTCCA GGACTGCATATCATCCATATTGCAGCCGAGATGGCGCCTGTTGCGAAGGTAGGTGGTCTA GGGGATGTGGTGGCAGGTCTTGGCAAAGCTCTGCAGGAAAAAGGACACCTTGTGGAAATT GTTCTTCCTAAATATGATTGTATGCAGTATGAGTCAATCAAGGACATGAAGGTCTTAGAT GTGGTGGTTGAGTCATATTTTGATGGTCGGTTATACAACAATAATATCTGGACGGGCACT GTTGAAGGCCTTCCAGTTTATTTTATTGAACCTCAGCACCCTGGTAAATTCTTCTGTAGA GGACAACTTTATGGAGAGCACGATGATTTCAAACGATTTTCATTCTTTAGTAGGGTAGCA CTTGAATTTCTACTTCAGGCTGAAAAGAGACCAGATATAATTCATTGCCATGATTGGCAA ACAGCTTTTGTTGCACCACTTTATTGGGAAATATATGTGCCAAAAGGATTGGACTCAGCG AGGATTTGCTTTACATGCCATAATTTTGAGTATCAAGGGACTGCACCGGCATCAGAATTA ACATCTTGCGGTCTTGATGCTTATCACTTGAACAGACCAGATAGGATGCAGGACAATTCA GCAAATGATAGAATAAATCCCGTGAAGGGTGCAATTGTGTTCTCTAACATTGTTACCACA GTTTCACCAACTTATGCTCAAGAGGTCCGCTCTGTTCAGGGAGGAAAAGGACTTCATGCA ACAATTAACTCCCATTCTAAGAAATTTGCTGGAATTCTAAATGGAATCGATACTGCTGCT TGGAATCCTGCTTCTGATAATTTTCTTAAGGTCCAATACAGTGCCAGTGACATAGATGGA AAAATAGAAAATAAAGAAGCTTTAAGAAGACTTCTAGGGCTCTCTTCTTCTGACTTTAGA CAACCATTGGTTGGTTGCATAACAAGACTGGTTCCTCAAAAGGGTGTGCATCTTATTAGA CATGCCGTATATAGGACTTTGGAGTTGGGAGGTCAATTTGTTCTTCTTGGTTCTAGCCCA GTGCCGCATATTCAGAGGGAATTTGAGGATATTGCGAACCATTTCCAAAATCACGAACAT GCTCGGTTGGTATTGAAGTATGATGAGGCTCTTTCCCATTTGATATATGCAGCATCTGAC ATGCTTATTATCCCTTCCATCTTTGAGCCTTGCGGTCTTACTCAGATGATAGCAATGAGA TATGGGTCGATACCAATAGCTAGGAAAACAGGGGGCTTGAATGATAGTGTTTTTGATGTT GACGATGACTCAATCCCACTTCAGTTTAGAAATGGATTCACATTTGCGACTGCTGATGAA CAGGGATTCAACAATGCTTTGGAACGTGCATTTAACTATTATATGAACAATTATGAGATC TGGAAAGAGTTTGTTCAGAAGGACATGAGCATAGATTTTAGTTGGGATTCATCAGCATCA CAATATGAAGAACTTTACGAGAAGGCTGTGTTGAGAGCAAGAGCTGCAAGTCGTAATTGA TCTCATTCCAATCACAATTTGTTAATTTATTGATCTAGTTAGCTGCTTGAATATGCATGC CATCATTGTGTGGCAATAGCATCCACTCGAGGATAACAGGGTGAGCAACCACTTCACTGA GCATTTGTGATTTCACAATGAGTGTAATGCATGTACAACCTCGGATATCAAAGGTGCAAG GCAAAATTGGCATACCAATACCATCTGTGAAGCTTTTCCGGCGAGAAATGAGCAACTCAG TTTAATTTACAATTTTCTGTAAATCTTTATGTTGTTAGTACAATATATTCTTTTTGGCCA AATATGTTGTTAGTAAATACTTTTCATAGTGCTTAAAGCAAGAATATAGAGAGTGTAGTC AACTTGTTTACGTACGTGAGATCCTGTATAGATTATTTTAAAAAGAGAATTCATTAAATT AAATAAACTGCTCTAGTTGAAAATTCAAGTT