Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g070560.3.1
CDS Infomation

ribosomal protein S11 family protein
Sequence

ATGTTAGTCATGCGATCTCAATCTTGTGGTTCAAATTTGGATTTGAATTCTGATTTCTAT
CGACTTGGGGTTTCTCAATTTCGAAAAGGGTCTCTGAATCTGAAATTTCAGCGTTTATTG
ATCAATTTTCATCATCTCCGATTAAGCTCTCATTTTCCTGTGAAGATCCGTAGATCAAGT
GCTAGGCGTTATGGGTTCTGTTTGCCTCCTAGGCTTTTTCAAGTTCGAGCAATGGATGAT
GATGTTGGGGTCTCTTCGTTTCATGACTGGGGAGATAATAATGGAGCAGTTGAATATAGG
TTCTCATCAAGTGAAGGTGAAGACAGTGATGGAGATATTTTACTACAGCCAATCACGGAT
GTTGATTTGCCTACCTCCAAGGAGCAGCTTTATTCTGCTGACGACACCGTAAGAACTCAC
CAGCTAACAATGCTTGGCAGAGCGTACAAGAGAAAAAGGATAAAATATGGCATTCTAAAC
AACATAGGTCTCATAATGTTCTCGACGGTGCTTCTGTCTCTTGTGGATTGCTGTGCATGG
AAAATTGTTAGATTGCCACTGGCTCCACTTTACCTAATGCGTCCCTTTCTCATCTCCGCA
GTGGCAGTGTCTTGTGTAGGTTATGTCTGTGTCCCGTTATTTCGTAGTTTGAAACTCCAC
TCTGTAATCAGGAAGGAGGGGCCTGCTCGGCACTCTAGTAAGAAAGGCACTGCTACAATG
GGCGGATTGTATTTTATTCCAATTGGAGTAATTGTTGCTGAAATTATTGTTGGATTTTCT
TCTCTGGAAGTTCTTGGAGCTTCTGCAGCAACTTTAACTTTTGCAGCAATTGGATTACTT
GATGATTTGATAAGTATGAGGAATAATAATGTTGGCTTGTCTGCTCGATTTCGGATCATG
TTGGAGGTTGCTGCTGGGACATTTTTCTCCTTTTGGCTGTATGCGTCGGACATATCGTCA
CCCTACAGCATGAAAACAGTGGTTCCCCTACCCGCGCCTCTTGGGCTCATATGCCTTGGA
AGACTCTATCCTTTTTTAACTTCGTTTTGCTTTGCTTCCATGGCTAATGGAATTAATCTT
ACTGACGGTCTCGACGGATTGGCTGGAGGAACAGCCACATTGGCGTTCATTGCAATGGCT
ATTGCAGTGCTTCCTATATGTTCTGAGCTTTCCATATTTGGAGCATCTATGGCAGGAGCC
TGTGCAGGTTTTCTTCTGCACAACCGCTACAAAGCATCAATATTTATGGGTGATACAGGA
GCTTTAGCCTTAGGGGGTGCTCTAGCTTCTATGGCTGCATGTACGGGGATGTTCTTTCCA
TTGTTCATCTCATCTGGTGTTTTTGTCCTCGAAGCACTATCAGTTATACTGCAGGTTTCC
TTCTTCAAGACAACGAAACACTTCCTAGGAACTGGACACCGCTTGTTTCGAATGGCACCA
TTACATCACCACCTTGAATTATGTGGAGTAAAAGAACCTGTCATTGTTGCTGGTGCATAT
GTTTTTTCTTGCATTTTGGCCTTGACTGCTGGATATGTGGGACTGGCTTCAGTATAA

Peptide Sequence

PEP ID

Solyc02g070560.3.1
PEP Infomation

ribosomal protein S11 family protein
Sequence

MLVMRSQSCGSNLDLNSDFYRLGVSQFRKGSLNLKFQRLLINFHHLRLSSHFPVKIRRSS
ARRYGFCLPPRLFQVRAMDDDVGVSSFHDWGDNNGAVEYRFSSSEGEDSDGDILLQPITD
VDLPTSKEQLYSADDTVRTHQLTMLGRAYKRKRIKYGILNNIGLIMFSTVLLSLVDCCAW
KIVRLPLAPLYLMRPFLISAVAVSCVGYVCVPLFRSLKLHSVIRKEGPARHSSKKGTATM
GGLYFIPIGVIVAEIIVGFSSLEVLGASAATLTFAAIGLLDDLISMRNNNVGLSARFRIM
LEVAAGTFFSFWLYASDISSPYSMKTVVPLPAPLGLICLGRLYPFLTSFCFASMANGINL
TDGLDGLAGGTATLAFIAMAIAVLPICSELSIFGASMAGACAGFLLHNRYKASIFMGDTG
ALALGGALASMAACTGMFFPLFISSGVFVLEALSVILQVSFFKTTKHFLGTGHRLFRMAP
LHHHLELCGVKEPVIVAGAYVFSCILALTAGYVGLASV*

Transcript Sequence

Transcript ID

Solyc02g070560.3.1
Transcript Infomation

ribosomal protein S11 family protein
Sequence

GGAGGATTATTTTTTTCCCTCTTTCCCCATTCTTCTTTGAACTCAGTATATTCCTTTATT
CTTCTCTCTTTCTGCAAAATCAAACCAATTTTCATACATATGTTTGTTTAATGGAGTTGA
CGTTCATGTGAATCGGATAATCCTTTTGATTTTACACTTTGAAAAATGTTAGTCATGCGA
TCTCAATCTTGTGGTTCAAATTTGGATTTGAATTCTGATTTCTATCGACTTGGGGTTTCT
CAATTTCGAAAAGGGTCTCTGAATCTGAAATTTCAGCGTTTATTGATCAATTTTCATCAT
CTCCGATTAAGCTCTCATTTTCCTGTGAAGATCCGTAGATCAAGTGCTAGGCGTTATGGG
TTCTGTTTGCCTCCTAGGCTTTTTCAAGTTCGAGCAATGGATGATGATGTTGGGGTCTCT
TCGTTTCATGACTGGGGAGATAATAATGGAGCAGTTGAATATAGGTTCTCATCAAGTGAA
GGTGAAGACAGTGATGGAGATATTTTACTACAGCCAATCACGGATGTTGATTTGCCTACC
TCCAAGGAGCAGCTTTATTCTGCTGACGACACCGTAAGAACTCACCAGCTAACAATGCTT
GGCAGAGCGTACAAGAGAAAAAGGATAAAATATGGCATTCTAAACAACATAGGTCTCATA
ATGTTCTCGACGGTGCTTCTGTCTCTTGTGGATTGCTGTGCATGGAAAATTGTTAGATTG
CCACTGGCTCCACTTTACCTAATGCGTCCCTTTCTCATCTCCGCAGTGGCAGTGTCTTGT
GTAGGTTATGTCTGTGTCCCGTTATTTCGTAGTTTGAAACTCCACTCTGTAATCAGGAAG
GAGGGGCCTGCTCGGCACTCTAGTAAGAAAGGCACTGCTACAATGGGCGGATTGTATTTT
ATTCCAATTGGAGTAATTGTTGCTGAAATTATTGTTGGATTTTCTTCTCTGGAAGTTCTT
GGAGCTTCTGCAGCAACTTTAACTTTTGCAGCAATTGGATTACTTGATGATTTGATAAGT
ATGAGGAATAATAATGTTGGCTTGTCTGCTCGATTTCGGATCATGTTGGAGGTTGCTGCT
GGGACATTTTTCTCCTTTTGGCTGTATGCGTCGGACATATCGTCACCCTACAGCATGAAA
ACAGTGGTTCCCCTACCCGCGCCTCTTGGGCTCATATGCCTTGGAAGACTCTATCCTTTT
TTAACTTCGTTTTGCTTTGCTTCCATGGCTAATGGAATTAATCTTACTGACGGTCTCGAC
GGATTGGCTGGAGGAACAGCCACATTGGCGTTCATTGCAATGGCTATTGCAGTGCTTCCT
ATATGTTCTGAGCTTTCCATATTTGGAGCATCTATGGCAGGAGCCTGTGCAGGTTTTCTT
CTGCACAACCGCTACAAAGCATCAATATTTATGGGTGATACAGGAGCTTTAGCCTTAGGG
GGTGCTCTAGCTTCTATGGCTGCATGTACGGGGATGTTCTTTCCATTGTTCATCTCATCT
GGTGTTTTTGTCCTCGAAGCACTATCAGTTATACTGCAGGTTTCCTTCTTCAAGACAACG
AAACACTTCCTAGGAACTGGACACCGCTTGTTTCGAATGGCACCATTACATCACCACCTT
GAATTATGTGGAGTAAAAGAACCTGTCATTGTTGCTGGTGCATATGTTTTTTCTTGCATT
TTGGCCTTGACTGCTGGATATGTGGGACTGGCTTCAGTATAACCTCACCTCATGAAGTTC
AAGTCACTTCCTGCAAATTTTCTCTTTTGCGTTCAAACTTAGACAACAGATTGAAGAAAC
TGTTTTTTTTTTCCTTTCCAAAAAAAAAAATGTAGTTATTTTGATCTACCTCTGTAACTT
AACTAGGAATAGTTGTTACTATCCAAATACTTGAGAATCGTAAAATAACCCTATTACTGG
CTTCTTTGTATCGCCCGTCTCAAATTCGGATAAAGGAGAAAGATTATCGAGAATCAAATA
GACATATATATATTTGATACACATTTTAAACATATAATTATATTTGATACATTTATAAAT
GTATCCAGAAATTCAT