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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g070200.2.1
CDS Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

ATGACTAAGTTAACAATCTTTCTCTTTCTCTCCTTTTGCCTAATTTCATCATCATATTCA
TTGGCCTACAAAAGTACTCATGATGACTTTGTTGAATGTCTTTCTCACAAAATTATGAAC
TCAACCTTAATATCACAAGTCATACACACTCCTAAAAACTCATCATATTCCACCCTTTTA
AACTCATTTTCATTTAACCTAAGGATAAGCTCCAACTTCGAACCATCAACAATTTTCACT
CCTACCAACGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGTCTACAA
ATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCCGAGATTCCC
TTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGACACCGAAAAAAAGACA
GCTTGGATTCAAGCTGGCGCGACCCTAGGAGAAGTTTACTATAGAATCGCGGAAAAAAGT
AAAAAATTAGCCTTTGCTGCTGGGGTTTGCCCAACTGTGGGTGTTGGTGGACACTTTAGT
GGTGGAGGGTATGGTATGTTGTCAAGAAAATACGGTACTGCTGCTGATAACATCATTGAT
GCAAAATTAATTGGTGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCAC
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATA
AAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAA
AATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTC
CTCCTCAGGATCTTCGTGAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATC
CACGCCTCTTTCGTTGCACTATACGTTGGAGGAGTGGATGAACTCCTCCACGAAGTTCAA
AAGAGCTTCGCGGAGCTAGGGTTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAA
TCTACACTCTTCTTTGCGGGTTTCCCTAGGAATACATCACTTGATGTGTTACTAAATTGG
AATACCACAACTAATCAAAAAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAAACA
ATTTCTTTGAATGGTATTGAAGGTGTATTGAAACTATTATTCAACCAATTAGGAGGCGAA
AACTCGGGTGCTGAATTACAATTTAGTCCTTACGGAGGAAAGTTGAGCGATATCTCAGAA
TTTGAAATTCCTTTCCCTCATAGAGCTGGAAACATATTCATGATTGAGTACGCGGTGTAT
TGGGGAAATATTAACTATTCTCAAAGTAACATAGATTGGAGTCGAAAAATTTATCGATAC
ATGGGTAAGTATGTATCAAAATCTCCAAGAGCTGCATATTTCAATTATAGAGATCTTGAT
TTAGGGATGAATAATATTAGTGGAAACACAAGCTATGCACAAGCAAGAATTTGGGGAGTG
AAATATTTCAAGAACAACTTTGATAGATTGGTCAAAATCAAGACTAAAATTGATCCAACA
AATTTCTTTAGGAATGAACAAACTCGGATTCGACAACTTTACGAATACATGGCTAAGTAT
GTGTCGAAATCTCCTAGAGCTGCATATTTTAACTATAGAGATCTCGATTTAGGAATGAAC
AACAAAGGAAACACAAGCTATGAACAAGGAAAAATTTGGGGGAGAAATACTTCAAGAACA
ACTTTGATAGATTAG

Peptide Sequence

PEP ID

Solyc02g070200.2.1
PEP Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

MTKLTIFLFLSFCLISSSYSLAYKSTHDDFVECLSHKIMNSTLISQVIHTPKNSSYSTLL
NSFSFNLRISSNFEPSTIFTPTNESQIQEAIHCSKKHGLQIRIRGGGHDYEGLSYISEIP
FVVIDLRNLRSISIDTEKKTAWIQAGATLGEVYYRIAEKSKKLAFAAGVCPTVGVGGHFS
GGGYGMLSRKYGTAADNIIDAKLIGANGRIHDRESMGEDHFWAIRGGGGTSFGLIISWKI
KLVDIPEKVTVFNVPRTLEQNVTQLVYKWQHIADKVDDNLLLRIFVRNSEFPFGGGQRTI
HASFVALYVGGVDELLHEVQKSFAELGLVKDDCIEMSWIESTLFFAGFPRNTSLDVLLNW
NTTTNQKGYFKGKSDYVQQTISLNGIEGVLKLLFNQLGGENSGAELQFSPYGGKLSDISE
FEIPFPHRAGNIFMIEYAVYWGNINYSQSNIDWSRKIYRYMGKYVSKSPRAAYFNYRDLD
LGMNNISGNTSYAQARIWGVKYFKNNFDRLVKIKTKIDPTNFFRNEQTRIRQLYEYMAKY
VSKSPRAAYFNYRDLDLGMNNKGNTSYEQGKIWGRNTSRTTLID*

Transcript Sequence

Transcript ID

Solyc02g070200.2.1
Transcript Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

ATGACTAAGTTAACAATCTTTCTCTTTCTCTCCTTTTGCCTAATTTCATCATCATATTCA
TTGGCCTACAAAAGTACTCATGATGACTTTGTTGAATGTCTTTCTCACAAAATTATGAAC
TCAACCTTAATATCACAAGTCATACACACTCCTAAAAACTCATCATATTCCACCCTTTTA
AACTCATTTTCATTTAACCTAAGGATAAGCTCCAACTTCGAACCATCAACAATTTTCACT
CCTACCAACGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGTCTACAA
ATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCCGAGATTCCC
TTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGACACCGAAAAAAAGACA
GCTTGGATTCAAGCTGGCGCGACCCTAGGAGAAGTTTACTATAGAATCGCGGAAAAAAGT
AAAAAATTAGCCTTTGCTGCTGGGGTTTGCCCAACTGTGGGTGTTGGTGGACACTTTAGT
GGTGGAGGGTATGGTATGTTGTCAAGAAAATACGGTACTGCTGCTGATAACATCATTGAT
GCAAAATTAATTGGTGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCAC
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATA
AAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAA
AATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTC
CTCCTCAGGATCTTCGTGAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATC
CACGCCTCTTTCGTTGCACTATACGTTGGAGGAGTGGATGAACTCCTCCACGAAGTTCAA
AAGAGCTTCGCGGAGCTAGGGTTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAA
TCTACACTCTTCTTTGCGGGTTTCCCTAGGAATACATCACTTGATGTGTTACTAAATTGG
AATACCACAACTAATCAAAAAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAAACA
ATTTCTTTGAATGGTATTGAAGGTGTATTGAAACTATTATTCAACCAATTAGGAGGCGAA
AACTCGGGTGCTGAATTACAATTTAGTCCTTACGGAGGAAAGTTGAGCGATATCTCAGAA
TTTGAAATTCCTTTCCCTCATAGAGCTGGAAACATATTCATGATTGAGTACGCGGTGTAT
TGGGGAAATATTAACTATTCTCAAAGTAACATAGATTGGAGTCGAAAAATTTATCGATAC
ATGGGTAAGTATGTATCAAAATCTCCAAGAGCTGCATATTTCAATTATAGAGATCTTGAT
TTAGGGATGAATAATATTAGTGGAAACACAAGCTATGCACAAGCAAGAATTTGGGGAGTG
AAATATTTCAAGAACAACTTTGATAGATTGGTCAAAATCAAGACTAAAATTGATCCAACA
AATTTCTTTAGGAATGAACAAACTCGGATTCGACAACTTTACGAATACATGGCTAAGTAT
GTGTCGAAATCTCCTAGAGCTGCATATTTTAACTATAGAGATCTCGATTTAGGAATGAAC
AACAAAGGAAACACAAGCTATGAACAAGGAAAAATTTGGGGGAGAAATACTTCAAGAACA
ACTTTGATAGATTAG