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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g070180.2.1
CDS Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

ATGAGTAAGTTAACAACTTTTCTCATTCTCTCAATTTGCCTAATTTCATATTCATGGGCT
TACAAAAGTACTCATGGTGACTTTGTTGAATGTCTTTCTCACAAAATTATGAACTCAACC
TCAATATCACAAGTCATTCACACTCCTAAAAACTCATCATATTCAACCATTTATAACTCC
TTTTTAGATCATAACTTAAGGATAACCTCCAACTTCAAACCATCAATTATTTTCACTCCT
ACCAAAGAATCTCAAATCCAGGTAGCTATATATTGCTCCAAGTTACATGACCTACAAATT
AGAATTCGAAGCGGTGGACATGACTATGAGGGACTTTCATATATTTCTGACAACCCCTTT
TTCCTGATTGATCTTAGAAACCTAAGATCAATCTCCATTGATATAAAAAACAAGACTGCT
TGGGTTCAAGCTGGCGCGACTTTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAC
AATAAATTGGCCTTTGTTGCTGGGGCTTGCCCTAGTGTTGGTGTTGGTGGACACATTAGT
GGTGGAGGCTATAGCATGATGTCAAGAAAATTTGGTATTGCTGCTGATAACATCATTGAT
GCAAAATTAATTGATGCTAATGGACAGATTCAGGATCGAGAATCAATGGGTGAGGATCTG
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAAATA
AAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGGGACGAACATTGAAACAA
AATGCAACTCAACTGGTCTACAAATGGCAACATATCACGGACAAAGTTGATGACAATCTC
CTCATCAGGCTCTTCGTGAGAAACAGTGAATTCCCATACGGGTTTGGTAAAAGGGATATC
TACGCCTTTTTCACTACAATGTTCGTTGGAAGAGTAGATGAACTCCTCCACGAAATGCAA
GATAAGTTCCCGGAGCTAGGGTTAGTGAAGGAAGATTGCATTGAGATGAGTTGGATCGAA
TCGATACTCTTCTTTGCTGGTTCCCCTAGGGGCACTTCACTTGATGTGTTACTTCATTGG
AATATTACCACAACTAATGAAAGAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAT
CCAATTTCTATATATGGTCTTGAAGGTATGTGGAAACTACTCAACCAATTAGCAGTTGAA
AACTCGGGGGCTGAATTACAGTTTAGTCCTTACGGAGGAAAATTGAGCGATATCTCAGAA
TCTGAAATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTAT
TGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATAC
ATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGAT
TTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTG
AAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACT
AATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCT

Peptide Sequence

PEP ID

Solyc02g070180.2.1
PEP Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

MSKLTTFLILSICLISYSWAYKSTHGDFVECLSHKIMNSTSISQVIHTPKNSSYSTIYNS
FLDHNLRITSNFKPSIIFTPTKESQIQVAIYCSKLHDLQIRIRSGGHDYEGLSYISDNPF
FLIDLRNLRSISIDIKNKTAWVQAGATLGEVYYRIAEKSNNKLAFVAGACPSVGVGGHIS
GGGYSMMSRKFGIAADNIIDAKLIDANGQIQDRESMGEDLFWAIRGGGGTSFGLIISWKI
KLVDIPEKVTVFNVGRTLKQNATQLVYKWQHITDKVDDNLLIRLFVRNSEFPYGFGKRDI
YAFFTTMFVGRVDELLHEMQDKFPELGLVKEDCIEMSWIESILFFAGSPRGTSLDVLLHW
NITTTNERGYFKGKSDYVQHPISIYGLEGMWKLLNQLAVENSGAELQFSPYGGKLSDISE
SEIPFPHRAGNIFTIEYGVYWSRIENSQRNIAWIRKLYEYMGKYVSKSPRAAYLNYRDLD
LGMNNINGNTSYEQARVWGVKYFNNNFDRLVQVKTKFDPTNFFRNQQSIPPLLS

Transcript Sequence

Transcript ID

Solyc02g070180.2.1
Transcript Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061G763_THECC)
Sequence

ATGAGTAAGTTAACAACTTTTCTCATTCTCTCAATTTGCCTAATTTCATATTCATGGGCT
TACAAAAGTACTCATGGTGACTTTGTTGAATGTCTTTCTCACAAAATTATGAACTCAACC
TCAATATCACAAGTCATTCACACTCCTAAAAACTCATCATATTCAACCATTTATAACTCC
TTTTTAGATCATAACTTAAGGATAACCTCCAACTTCAAACCATCAATTATTTTCACTCCT
ACCAAAGAATCTCAAATCCAGGTAGCTATATATTGCTCCAAGTTACATGACCTACAAATT
AGAATTCGAAGCGGTGGACATGACTATGAGGGACTTTCATATATTTCTGACAACCCCTTT
TTCCTGATTGATCTTAGAAACCTAAGATCAATCTCCATTGATATAAAAAACAAGACTGCT
TGGGTTCAAGCTGGCGCGACTTTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAC
AATAAATTGGCCTTTGTTGCTGGGGCTTGCCCTAGTGTTGGTGTTGGTGGACACATTAGT
GGTGGAGGCTATAGCATGATGTCAAGAAAATTTGGTATTGCTGCTGATAACATCATTGAT
GCAAAATTAATTGATGCTAATGGACAGATTCAGGATCGAGAATCAATGGGTGAGGATCTG
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAAATA
AAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGGGACGAACATTGAAACAA
AATGCAACTCAACTGGTCTACAAATGGCAACATATCACGGACAAAGTTGATGACAATCTC
CTCATCAGGCTCTTCGTGAGAAACAGTGAATTCCCATACGGGTTTGGTAAAAGGGATATC
TACGCCTTTTTCACTACAATGTTCGTTGGAAGAGTAGATGAACTCCTCCACGAAATGCAA
GATAAGTTCCCGGAGCTAGGGTTAGTGAAGGAAGATTGCATTGAGATGAGTTGGATCGAA
TCGATACTCTTCTTTGCTGGTTCCCCTAGGGGCACTTCACTTGATGTGTTACTTCATTGG
AATATTACCACAACTAATGAAAGAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAT
CCAATTTCTATATATGGTCTTGAAGGTATGTGGAAACTACTCAACCAATTAGCAGTTGAA
AACTCGGGGGCTGAATTACAGTTTAGTCCTTACGGAGGAAAATTGAGCGATATCTCAGAA
TCTGAAATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTAT
TGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATAC
ATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGAT
TTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTG
AAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACT
AATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCT