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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g070110.1.1
CDS Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

ATGATTACTTTCAACAACTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCA
TCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAAC
TCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTAT
GACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACT
CCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAA
ATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCG
TTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACT
GCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGT
AAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGT
GGTGGAGGGTATGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGAT
GCAAAGTTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCAC
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAGGTG
AAATTACTTGATATTCCACAAAAGGTAACCGTATTCAATGTGACACGAACGTTGGAACAA
AATGCAACTCAGCTAGTCTACAAATGGCAACACATCGCGGACAAAGTTGATGACAATCTC
CTCCTCAGGATCTTCCTGAGGAGTAGTGAGTCTCCAATCAGGCGTGGACAGAGGACTGTC
CACGCCTTTTTCACTACAATGTTTGTTGGAGGAGTAGATGAACTCCTCCACGAAATGAAA
GATAAGTTCCCGGAGCTAGGGTTAGTGAAGGAAGATTGCATTGAGATGAGTTGGATTGAA
TCTATACTCTTCTTTGTGGGTTTCCCTAGAGGCACATCAATTGATGTGTTACTAGATTGG
GATAACTCAACTTATCAATCAGGATTCTTCAAAGGGAAATCAGACTATGTCCAACGTCCA
ATTCCTATAAATGGTCTTGAAGGTATATGGAAACTATTCAACCAAGTAGGCGAAAACTCG
GCTGAATTACAATTAAGTCCCTATGGAGGAAAGTTGAGTGAGATATCGGAATCTGAAACA
CCTTTCCCTCATAGAGATGGAAACATATTCATGATCCATTATGGGGTGAATTGGGGTGAA
ATGGAAAGTTCTAATAAGCATATATCTTGGATTCGAAACCTTTATGGATACATGGCTAGG
TATGTGTCAAGATCTCCTAGAGCTGCTTATTTGAACTATAGAGATCTTGATTTAGGAGTG
AACAACAAAGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAAC
AACAACTTTGATAGATTGGTCAAAATCAAGACTAAAGTTGATCCAACAAATTTCTTTAGG
AATGAACAAAGTGTTCCTCCTCTATATATATAA

Peptide Sequence

PEP ID

Solyc02g070110.1.1
PEP Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

MITFNNLTIFFFLSICLISSSWANKTHDDFLKCLSHKIMNSNSKSQVIYTPKNSSYSTLY
DSFSSNLRITSDFKPSIIFTPNDESQIQEAIHCSKKHGLQIRIRGGGHDYEGLSYISETP
FVIIDLRNLRAISIDTEDKTAWIQAGARLGEVYYRIAEKSKKLAFVAGVCPTVGVGGHFS
GGGYGMMSRKFGTAADNIIDAKLIDANGRIHDRESMGEDHFWAIRGGGGTSFGLIISWKV
KLLDIPQKVTVFNVTRTLEQNATQLVYKWQHIADKVDDNLLLRIFLRSSESPIRRGQRTV
HAFFTTMFVGGVDELLHEMKDKFPELGLVKEDCIEMSWIESILFFVGFPRGTSIDVLLDW
DNSTYQSGFFKGKSDYVQRPIPINGLEGIWKLFNQVGENSAELQLSPYGGKLSEISESET
PFPHRDGNIFMIHYGVNWGEMESSNKHISWIRNLYGYMARYVSRSPRAAYLNYRDLDLGV
NNKGNTSYEQARVWGVKYFNNNFDRLVKIKTKVDPTNFFRNEQSVPPLYI*

Transcript Sequence

Transcript ID

Solyc02g070110.1.1
Transcript Infomation

FAD-binding Berberine family protein (AHRD V3.3 *** A0A061GF79_THECC)
Sequence

ATGATTACTTTCAACAACTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCA
TCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAAC
TCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTAT
GACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACT
CCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAA
ATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCG
TTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACT
GCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGT
AAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGT
GGTGGAGGGTATGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGAT
GCAAAGTTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCAC
TTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAGGTG
AAATTACTTGATATTCCACAAAAGGTAACCGTATTCAATGTGACACGAACGTTGGAACAA
AATGCAACTCAGCTAGTCTACAAATGGCAACACATCGCGGACAAAGTTGATGACAATCTC
CTCCTCAGGATCTTCCTGAGGAGTAGTGAGTCTCCAATCAGGCGTGGACAGAGGACTGTC
CACGCCTTTTTCACTACAATGTTTGTTGGAGGAGTAGATGAACTCCTCCACGAAATGAAA
GATAAGTTCCCGGAGCTAGGGTTAGTGAAGGAAGATTGCATTGAGATGAGTTGGATTGAA
TCTATACTCTTCTTTGTGGGTTTCCCTAGAGGCACATCAATTGATGTGTTACTAGATTGG
GATAACTCAACTTATCAATCAGGATTCTTCAAAGGGAAATCAGACTATGTCCAACGTCCA
ATTCCTATAAATGGTCTTGAAGGTATATGGAAACTATTCAACCAAGTAGGCGAAAACTCG
GCTGAATTACAATTAAGTCCCTATGGAGGAAAGTTGAGTGAGATATCGGAATCTGAAACA
CCTTTCCCTCATAGAGATGGAAACATATTCATGATCCATTATGGGGTGAATTGGGGTGAA
ATGGAAAGTTCTAATAAGCATATATCTTGGATTCGAAACCTTTATGGATACATGGCTAGG
TATGTGTCAAGATCTCCTAGAGCTGCTTATTTGAACTATAGAGATCTTGATTTAGGAGTG
AACAACAAAGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAAC
AACAACTTTGATAGATTGGTCAAAATCAAGACTAAAGTTGATCCAACAAATTTCTTTAGG
AATGAACAAAGTGTTCCTCCTCTATATATATAA