Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g069790.3.1
CDS Infomation

DNA-damage-repair/toleration protein (AHRD V3.3 *** W9RFT6_9ROSA)
Sequence

ATGCTCGGCGGCTTATACGGCGATCTCCCTCCGCCGTCGTCCTCCGGCGACGATGACAAG
CCAACCAACGCCACCACAGCTAATGTGTGGTCCAGCAGTGCTAAGATGGCTCCTTCAGCC
CTTCGCAAACCCTTCGCCCCACCCCAAACACTTCTTCGACCTCAGCCGAAGCCCAAACCG
CAGCCTTCAGCAGCTCCAAAACCTAATCCATCGATCCCTCTTGACGAGAACACTAATCCA
AATCCCACCTTTGCAACGACGTCGTTTCAACCAGCCCTGGTGGCTGTTACCAGCAGTGTA
TTAGAAGAATACGACCCGGCTCGGCCGAATGATTACGAAGATTATCGGAGGGAGAAGAAG
AGGAAGCAAATGGAGGCTGAGGTGCGGAGAGAGTTGGAAGAAAGAGAGAGAAAGGAGAGG
GAGCGAGAGAGGGAGGAAAAGGAGAAGAGAGAAAAAGAGAGAGAATTGAATATTTCAGGT
GAGGAGGCATGGAGGCGGAGGGCGGCAATGAGTGGAGGTGGTGGAGGAGGAGGCAGTGCT
CCCCCACGCTCGCCTTCGCCACCATCAGGGAATGAGTTTAGTATTGGGAGGTCAGAGAGT
GGGGGTTTGGGATTGGGAGCGGAAGGAAAGATGACAGCTGCACAAAGGATGATGGCTAAG
ATGGGTTGGAAGGAGGGTCAGGGACTTGGAAAGCTGGAGCAGGGAATTACGACTCCATTG
ATGGCTAAGAAGACTGATAAGAGAGGTGGGGTTATAGTGGCTAGTGAAGCAAAGCAGCAG
CAGCAACAGCAGCAGCAACAACAACAACAACAACAGGCACCTGAAAAGAAGGTTAAGAGT
GTCAATTTCAATATGCCTCCAACAAGGGTCGTGCTGCTTAGGAATATGGTTGGTCCTGGC
GAGGTTGATGATGACCTAGAAGGTGAGGTGGCTGAAGAGTGCTCTAAGTTTGGTACTGTA
ACTCGTGTCTTAATATTTGAGATTACAGAAACAAATTTCCCTCATGAAGAAGCTGTTCGG
ATATTCGTTCAATTTGAGAGAGCAGAACACGCAACTAAAGCCCTTATAGAACTTGAAGGT
CGATTTTTTGGCGGTAGGATTGTTCATGCCTGTTTCTACGACGAGGAGAGGTTTGGCAAT
AACGAATTAGCTCCCATGCCAGGAGAAATTCCTGGCTTTTGA

Peptide Sequence

PEP ID

Solyc02g069790.3.1
PEP Infomation

DNA-damage-repair/toleration protein (AHRD V3.3 *** W9RFT6_9ROSA)
Sequence

MLGGLYGDLPPPSSSGDDDKPTNATTANVWSSSAKMAPSALRKPFAPPQTLLRPQPKPKP
QPSAAPKPNPSIPLDENTNPNPTFATTSFQPALVAVTSSVLEEYDPARPNDYEDYRREKK
RKQMEAEVRRELEERERKEREREREEKEKREKERELNISGEEAWRRRAAMSGGGGGGGSA
PPRSPSPPSGNEFSIGRSESGGLGLGAEGKMTAAQRMMAKMGWKEGQGLGKLEQGITTPL
MAKKTDKRGGVIVASEAKQQQQQQQQQQQQQQAPEKKVKSVNFNMPPTRVVLLRNMVGPG
EVDDDLEGEVAEECSKFGTVTRVLIFEITETNFPHEEAVRIFVQFERAEHATKALIELEG
RFFGGRIVHACFYDEERFGNNELAPMPGEIPGF*

Transcript Sequence

Transcript ID

Solyc02g069790.3.1
Transcript Infomation

DNA-damage-repair/toleration protein (AHRD V3.3 *** W9RFT6_9ROSA)
Sequence

TTTGGTCAATTTAGAATCTCCGATCGCTTTCCGTTACAATGCTCGGCGGCTTATACGGCG
ATCTCCCTCCGCCGTCGTCCTCCGGCGACGATGACAAGCCAACCAACGCCACCACAGCTA
ATGTGTGGTCCAGCAGTGCTAAGATGGCTCCTTCAGCCCTTCGCAAACCCTTCGCCCCAC
CCCAAACACTTCTTCGACCTCAGCCGAAGCCCAAACCGCAGCCTTCAGCAGCTCCAAAAC
CTAATCCATCGATCCCTCTTGACGAGAACACTAATCCAAATCCCACCTTTGCAACGACGT
CGTTTCAACCAGCCCTGGTGGCTGTTACCAGCAGTGTATTAGAAGAATACGACCCGGCTC
GGCCGAATGATTACGAAGATTATCGGAGGGAGAAGAAGAGGAAGCAAATGGAGGCTGAGG
TGCGGAGAGAGTTGGAAGAAAGAGAGAGAAAGGAGAGGGAGCGAGAGAGGGAGGAAAAGG
AGAAGAGAGAAAAAGAGAGAGAATTGAATATTTCAGGTGAGGAGGCATGGAGGCGGAGGG
CGGCAATGAGTGGAGGTGGTGGAGGAGGAGGCAGTGCTCCCCCACGCTCGCCTTCGCCAC
CATCAGGGAATGAGTTTAGTATTGGGAGGTCAGAGAGTGGGGGTTTGGGATTGGGAGCGG
AAGGAAAGATGACAGCTGCACAAAGGATGATGGCTAAGATGGGTTGGAAGGAGGGTCAGG
GACTTGGAAAGCTGGAGCAGGGAATTACGACTCCATTGATGGCTAAGAAGACTGATAAGA
GAGGTGGGGTTATAGTGGCTAGTGAAGCAAAGCAGCAGCAGCAACAGCAGCAGCAACAAC
AACAACAACAACAGGCACCTGAAAAGAAGGTTAAGAGTGTCAATTTCAATATGCCTCCAA
CAAGGGTCGTGCTGCTTAGGAATATGGTTGGTCCTGGCGAGGTTGATGATGACCTAGAAG
GTGAGGTGGCTGAAGAGTGCTCTAAGTTTGGTACTGTAACTCGTGTCTTAATATTTGAGA
TTACAGAAACAAATTTCCCTCATGAAGAAGCTGTTCGGATATTCGTTCAATTTGAGAGAG
CAGAACACGCAACTAAAGCCCTTATAGAACTTGAAGGTCGATTTTTTGGCGGTAGGATTG
TTCATGCCTGTTTCTACGACGAGGAGAGGTTTGGCAATAACGAATTAGCTCCCATGCCAG
GAGAAATTCCTGGCTTTTGACCAAACAGTTATTGTCCAAATGTAACTTCTCTTTATTTTT
TAACCGGGACTGTAATTTTGCAAGCTTGTTTAGCGTGCCTTACGTGATACATCTCCTTGT
ACCTATCGTCTCAAGTTTACACAAAGCTATGTATCGAAAAACTTCACATTATTACTCTTG
AGGGAAATTGGTTTGGGTCCTTAGTTTTCATTGTAATGCAAGATATTAGAGAATTATTGT
TTTACCGTTGGTTCATTACTGTCTTAACTTTTTCATATATTAGTATATATATAAGGTTTA
TTCGATGCACACCACCTGAACTTTATACATTATTATTAAGTGTACATAAATTTTGAAGTT
CTGTGTGTTGCAACTTACAAGTAATCGATTTTTATTTTACTTTTTTGGTGGCAGGAAGAT
CTGAGATTGTTTTTTGAAGTGATAAACTTGAGTGGCTTGTAATGACTATTCTTTTTTTAA
AAAAGATAATCAATGTGTTGCTAAAAAGGGGAACACACTACATATCTCCACCATACTAAA
AAACATCTGTAGTTCTCTGTAATGTGGAAGTTGGTATATAGTCTTATCAATGATGTAATC
TA