Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g069580.3.1
CDS Infomation

UDP-glucose 4-epimerase, putative (AHRD V3.3 *** B9SV82_RICCO)
Sequence

ATGCTAGGCTTGGGCAGGGGAAGAGCTCAAACAAGGTCTAGCAGATCTATGTCTCTAGGA
GGCATGGATTATGCAGACCCAAAGAAGAAGAGCAATTTTGTGGGTAAAATTCTTATGGCT
GCTGTGCTAACAGCGCTATGCATTCTTATGCTCAAGCAGTCTCCAACTTTTAATACCCCA
AGTGCATTCTCTCGCCATCAACCAGGTGTTGTTCATGTCTTAGTCACCGGAGGTGCTGGC
TACATTGGTTCCCATGCAGCATTACGACTTTTAAAAGAAAATTACCGGGTGACGATAGTG
GACAACCTTTCACGAGGAAATATGGGAGCTGTGAGGATTCTGCAGGAATTATTTCCTGAA
CCAGGGAGGCTTCAGTTTATATATGCTGACTTGGGGGATGCAAAAGTGGTCCACCAGATA
TTCTCCCAGAATGCTTTTGATGCTGTGATGCATTTTGCAGCTGTAGCATATGTCGGAGAG
AGCACCCTCGATCCTCTAAAGTACTATCACAACATTACTTCAAATACGCTCACTGTCTTA
GAAGCTATGTCAGCTCATGGAGTCCCCACATTGATTTACTCTAGTACATGTGCGACATAT
GGAGAGCCTGAAAAGATGCCTATTACCGAAGAAACTCCACAGCTCCCTATTAATCCATAT
GGAAAAGCGAAGAAAATGGCAGAGGATATTATTTTGGATTTCCATAAGAACTCAAACATG
GCTGTCATGATTTTGAGGTACTTCAATGTGATTGGATCTGATCCAGAGGGAAGACTAGGA
GAAGCTCCCCGGCCTGAACTTCGTGAACATGGGCGAATTTCTGGTGCTTGTTATGATGCA
GCTCGTGGAATCATACCTGGTCTCAAGGTTAGAGGAACAGACTATAAGACAACAGATGGT
ACATGCATTAGGGATTATATAGATGTCACTGATCTGGTTGATGCTCATGTGAAAGCTCTT
GAAAAGTCTAGGCCTGGGAAGGTGGGAATCTACAATGTTGGAACCGGAAGAGGTAGATCA
GTGAAGGAATTTGTGGAGGCTTGCAAGGCAGCCACTGGAGTTCCTATCAAAGTTGACTTC
CTTCCTCGTCGCCCTGGTGATTATGCAGAAGTCTTTAGTGATCCTACTAAGATAAAACTT
GAACTGAACTGGACAGCCCAACACACTGATCTTCAAGAGAGTTTGCAGGTTGCATGGAGA
TGGCAGAAATCACACCTTAATGGTTATGGTTCATCTCTGGTCAAGTCTTCGTAA

Peptide Sequence

PEP ID

Solyc02g069580.3.1
PEP Infomation

UDP-glucose 4-epimerase, putative (AHRD V3.3 *** B9SV82_RICCO)
Sequence

MLGLGRGRAQTRSSRSMSLGGMDYADPKKKSNFVGKILMAAVLTALCILMLKQSPTFNTP
SAFSRHQPGVVHVLVTGGAGYIGSHAALRLLKENYRVTIVDNLSRGNMGAVRILQELFPE
PGRLQFIYADLGDAKVVHQIFSQNAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVL
EAMSAHGVPTLIYSSTCATYGEPEKMPITEETPQLPINPYGKAKKMAEDIILDFHKNSNM
AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACYDAARGIIPGLKVRGTDYKTTDG
TCIRDYIDVTDLVDAHVKALEKSRPGKVGIYNVGTGRGRSVKEFVEACKAATGVPIKVDF
LPRRPGDYAEVFSDPTKIKLELNWTAQHTDLQESLQVAWRWQKSHLNGYGSSLVKSS*

Transcript Sequence

Transcript ID

Solyc02g069580.3.1
Transcript Infomation

UDP-glucose 4-epimerase, putative (AHRD V3.3 *** B9SV82_RICCO)
Sequence

TGAGCAAATCGATAAAATAAAATAGTAGTAACACATGGCTAGCTAATGCCACTTCTCCAT
TTGGTATTTGACTTGATATTCTCAACAAATAAATAAATCAGTATACGCGCAAGAGACTAA
GGACTTTGTTTGTTGTTTATCAGCTCTACCGATACACTGAACCTTCTCCCTCTTTGTACG
TTTTCTTTTTTTTTGTTTTCCAAAATAAACATGATCGTGGACTCTACTCAATTCTCTTTC
TTCTACTATAAATTTCTTTAGAAGATATTTTTTATATGTTAGTTCATAGATCTCTTGATC
ATAAGGAGTTTTACTGTACAGTTTTGGAAATTGAAGCTGCAGGTTTGCTACTTCAACTGA
AATGCTGTTTCTTTTGCTGGATTTTCAACTCAGATCCTTTGGGAAATTTGAAATTTGTTG
TTTTTCTTCACTGATAACAGTTCCACATACAAAGAAGGGGCTTACTTGATCAGTAGTTTC
AAGTAATAAGATAATCTAATTTGATTGTTTGCCTATTTGGCATTGGAGAGATTATGCTAG
GCTTGGGCAGGGGAAGAGCTCAAACAAGGTCTAGCAGATCTATGTCTCTAGGAGGCATGG
ATTATGCAGACCCAAAGAAGAAGAGCAATTTTGTGGGTAAAATTCTTATGGCTGCTGTGC
TAACAGCGCTATGCATTCTTATGCTCAAGCAGTCTCCAACTTTTAATACCCCAAGTGCAT
TCTCTCGCCATCAACCAGGTGTTGTTCATGTCTTAGTCACCGGAGGTGCTGGCTACATTG
GTTCCCATGCAGCATTACGACTTTTAAAAGAAAATTACCGGGTGACGATAGTGGACAACC
TTTCACGAGGAAATATGGGAGCTGTGAGGATTCTGCAGGAATTATTTCCTGAACCAGGGA
GGCTTCAGTTTATATATGCTGACTTGGGGGATGCAAAAGTGGTCCACCAGATATTCTCCC
AGAATGCTTTTGATGCTGTGATGCATTTTGCAGCTGTAGCATATGTCGGAGAGAGCACCC
TCGATCCTCTAAAGTACTATCACAACATTACTTCAAATACGCTCACTGTCTTAGAAGCTA
TGTCAGCTCATGGAGTCCCCACATTGATTTACTCTAGTACATGTGCGACATATGGAGAGC
CTGAAAAGATGCCTATTACCGAAGAAACTCCACAGCTCCCTATTAATCCATATGGAAAAG
CGAAGAAAATGGCAGAGGATATTATTTTGGATTTCCATAAGAACTCAAACATGGCTGTCA
TGATTTTGAGGTACTTCAATGTGATTGGATCTGATCCAGAGGGAAGACTAGGAGAAGCTC
CCCGGCCTGAACTTCGTGAACATGGGCGAATTTCTGGTGCTTGTTATGATGCAGCTCGTG
GAATCATACCTGGTCTCAAGGTTAGAGGAACAGACTATAAGACAACAGATGGTACATGCA
TTAGGGATTATATAGATGTCACTGATCTGGTTGATGCTCATGTGAAAGCTCTTGAAAAGT
CTAGGCCTGGGAAGGTGGGAATCTACAATGTTGGAACCGGAAGAGGTAGATCAGTGAAGG
AATTTGTGGAGGCTTGCAAGGCAGCCACTGGAGTTCCTATCAAAGTTGACTTCCTTCCTC
GTCGCCCTGGTGATTATGCAGAAGTCTTTAGTGATCCTACTAAGATAAAACTTGAACTGA
ACTGGACAGCCCAACACACTGATCTTCAAGAGAGTTTGCAGGTTGCATGGAGATGGCAGA
AATCACACCTTAATGGTTATGGTTCATCTCTGGTCAAGTCTTCGTAATGCATTGACAACT
TATCGTTGTGGAAGATCGACATGAACCCCATCACACAGCTTAACATTGTCGTGGATTTTT
AGTATTGCTAGAGTAGTTTTTTTGGAAGCGAAAGAGGGGTCTATATTTTTTCGTTCATCT
AGATTGAATTACATGACACAGTTTTGTGTATTAGTCAGCCTATTTATCCAGTCATATATG
ATGTGTATCTTAGTCTAGTAAAACATATATTTAGATCAATAATAGTTCTGGGCCAGTATA
GCTTCGTCCCTCATCTATGCTCATTTGAATTTGTTGCGTGTTTATTCTTGATGTATATAG
AAAACTGGGTGTTATAATTGCCTCCACTTTTGGAGAAATGGAAGTTGCTTCGACCATATC
AGTAATAAATTCTGTATATTTGATAATTTCCAACAATTTGAAATCAATTTTGGCAAAGGT
AATTCTTTCCAATAACTTCTTGCTGAACTAAACAATCAAATATGATTATACTGATAAAGA
ATAGTTGATTATGAACTTGACTCTTAACTCTTAACAAATAGAGCACTTGTTCAAGAACAG
ATCAGTATCTGATGATTTTTCTTCTTTTGGGCTGTAGCAAAGTTAACAAACTAGAGCTGT
TTCACTATGAACTCTATCTACTTTTGTCGATTGAGTTCTCAAAAATTCTTTACAAGAAGC
CATTAGATTGTTGAGTATTTTGCTGTCATTTCTGGCAACAATCCGGCTCACCTCTTGTAG
CAATCTGAAAAGCGTACCGTCTGATAATTGATCAGAATTTTCCTCAAAAAACTTCATCCA
AAACTTGGCAGAAAATGCCTGAGACTCAGCAGGAGGATAATCAGTAACACAAGTCAGGGC
AGCAGCAATGTTCCCTCTTTCCAGCTGCATGCGGAACATTTCTTTGACTAGTGGCACTGG
TGGAACCCGATCAGCCCGAGCCAAGTCCTTCCATGTTGCTTCCAATAATTCCACCTGAAA
AGGTCCGTGTAGAATAGTCATAACTCTTAACTATCATCAGCTAAAGAAATGAAAGTGGGA
TATCGTCAGAGTAAAACCAAAACAACCTTAGATTCACTTTAGTATACTGGCCCAAAAGAT
CGATATGACAAACCAATGATACTGTCATTCGGTAATAGGGATAGTTTTTATTTTTATTTT
TGTAAAGGTGGTATTCAGACCACCAAAAGCTTAGAAAGATGGGAAGAATTACCACCTAAT
GTTGTCTTCATAGATGTCTTTACTGACCACTAGGTCACAACGTTGTGCTCTACAGTGATA
AAAGGATAGTAGTTGCACCCTTGGAAATTATTGGGAAGTTCGAGGTGTGTTCCCAGTAAA
CTAAAAAACCATAATATTTCACTCCAGAACTAGAAAACGGGATGCAGCTGTATAAAAAAG
AAAAAAGAGATTCAGGAAGCTTCTCAAGCAACCCAGTCAAGCTCCTTATGTAGTAGAAAG
TATCTTCTCAAGCCCAAGCTACCTTCTAACTCAAACTTCCCTGCGTCCTGCACTGACAGG
GAAAAGAGAGTGCCAACCACCACTCCTCTCTCTATTTTTTTTTTATTCCTAGCAGTAGGT
AGACAATCACAAAAGGTACGTGACATATGAGCTGATAACTCTCAGACCATTGGCTTGTCA
TAGTACCTGGCATCAAATTGAAAACAATTTGAACTCCACGTATGCCACCCTGGTAATCAA
AAGAAACCCCATTGTGTTCACTGGTTTCTCATTCCAGCAAGAAATTTGTTGGCCACAAGT
TAAGACAGCATTTTCCATCCCAGAACATCCTCTTAATTCCTTCAGCCAACAAAAATAATT
CCGAGTGCTGACGATCATGCTCTTATCTTCACATCCATAATACCAATTAGGTCGGTGAAG
AACTACCCAACTAATCAGTTATACTTCAGCAAGTACATGAGGAAACAAATAACTCATAGT
TCTCACAGAAGGAAAACAAAAACATCCGGAGGTATTGTATGAGCAAGAAAGACTTGGCTA
AAGGATGAAACTAATTAAAAAAGCTTCTTTTCTTTGCTGTAACAATCCTAGGTGTGTTGA
TCTCTATTATTACCCAAAATCATCGACACATATTATAGCAAGAACTTACAATTTTTTTCT
TAAACAGACTATAAAGAGATCAAATTAGTTTTTATAATATAGAAAGAAAAGAATTAGTTT
TATTGTACTGGTCTGATTCAATTTTGTGCACAAGTTTCATACTACTACTTTTTGACACAT
AAGTTACATCGTTTTATTATTTACAGAAAATTGGGGGCGGATCAGTTTTCAAATATTTTC
TCTAAAGAAAAGCTAGTTATATTTCAACAAAACAGAAAGTTGTACAATAATTTGACAGTC
TACACCATGATCAGCTAAATAAAATTTCATATGGGAATTTCCTAGGAATGACAACCAATG
AACATGAAAGGCTGAATACTGGGTTGACAAAGTGTACCTTTCCATCCCTGCAGGAGTCAA
GTACCATCTGAATGTGACGCTTTGCATTGAAGTGGTATCCATATTTCAGCATATGTGAGT
ACACAAACTTGAGATCATCCCATTTCTTTCCAGCAGCACATGCATCCAACATCAAGTTGA
ATGTGTAGACATCTGGGAAAACCTTATCCTTACCGTCCAATTTACTGCTAATAGAGTTAC
CATTATCCAATAACTTGAAAAACATTTGCTTTGCTTCTTCAAACATCCCACTATCTAGAT
AACCTTTTAGCATTATATTATAAGTTATCAAATTTGGGGAGCAGAACTGGTGCATGTGGT
TGAAGATGTATGCTCCACTCTGAATGTCACCAGAATCCAGACAGGCTTGAATTAGACCAG
TGTAAGTCACCACTAGAGGCTTCGTAGCAACTTTGCATATCTTTCCCATCTGTTCCACAG
TAGAAGATGGACCCAAAGATAGAAGGAACATTAGTATTTAACTGAAAGGTCTTTCTGGAG
ATAATCAACACAAATCATGTAAGTATAAATAAGTTATCTGTTCTTTGGTATTATGGCCTA
AATTCTTTGCTCCTTGATAATCAATCAAAACCTCTTATTCAATGACTGAGGGAATTTCAA
CAGTCCCATATTTAACAATGCCGTAAAGGTAATGGATATCGCAATGGATCTACAGGGACA
ATCC