Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g069570.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T6B9_RICCO)
Sequence	ATGGTGGCAATTATCTTGACAGAAGCTCTATTTGGAGCTTCACTTTGTACTGATTTCAAT GGAGTTTTTGGTTCAAATTACCTCCGTTGCCCTTGTTTTTCATCAGGATTTTCAATTTCC GAGACACCCACTTTAGAAATTTCTCTGGGAAAGAAAAAGGTTAAGAAGCAGAAGAGGAAT GCGGGTTCCATTGTAGTTTCTTGTGGCTTAGATAATGTAATTAATAGAGAAGAGCTTGAA TTCAAGCCTTCATTTGATGAGTATTTGAAAGCTATGGAGTCTGTTAAAGAAAAGAAACAG AGGGATAGTGTTAGAAGAAAGAAGAGTGAAGAAAAGGGCAAATTTGTGAAGTCTGAGAAG GAGAAATGTGTAGAAAGTTCTGATTTTGTGGAGCTGAATGAGAAATATGAAGGAGTTGGA GTTGTAAAAGAGAGTGGTGGTGGTGGTGGGAAATTGGAATTTAGAATGGTGAAGAATCAG AAAAGACAGAGCATAAGTAAGGACAAGAATGTTGATGAGATGGTGAGTATGGAAAGAGAG GCTTTTAAGACAATGGATGGAGATGTTTATGATAAGCCAAGAGTTACTAAGGCAGAGATG GAAGAGAGAATCCAAAAGCTTGCAAAGTGTCTAAATGGTGCGGACATTGACATGCCTGAG TGGATGTTCTCTCAAATGATGCGAAGTGCTCAGATTAAATTCTCAGATCATTCTATCTTG AGGATTATCCAAATATTGGGTAGATTAGGAAATTGGAGACGGGTGCTGCAAGTCATTGAA TGGCTTCGTTCACGTGAGCGCTTTAAGTCACACAAGTTAAGATATATTTACACGGCTGCA CTGGATGCACTGGGAAAGGCAAATAGGCCAGTGGAAGCACTAAACTTGTTTAATGCAATG CAGGAGCACATAACATCATATCCGGACCTTGTAGCTTACCGTTGTATTGCTGTCACTCTT GGACAAGCAGGACATATGAAGGAACTATTTGACGTCATCGATACCATGCGGTCACCACCC AAAAAGAAGTTCAAGACTAATATAATTGAGAAGTTTGATCCACGACTTGAGCCAGATGTT GTCGTCTATAACTCTGTGCTAAATGCCTGTGTTCGCCGTAAAAGCTGGGAGGGTGCCTTT TGGGTACTGCAACAGCTAAAGCTCCGGAACGAGCAGCCCTCAATGACAACATATGGATTA GTCATGGAGGTTATGTTCGAATGTGGCAAATACAATTTGGTTCATGACTTTTTCAAGAAA ATGCAGAAGTCATGTGTTCCCAATGCTTTGACCTATAAAGTTATTGTGAGTACTCTTTGG AAGGAAGGGAAAACAGACGAGGCCTTACTGGCAGTAGAAGACATGGAGCGACGAGGAATC GTGGGCACTGCCAGTTTGTATTATGACCTTGCTCGTTGCCTTTGTAGTGCAGGGAGGTGT GAAGAGGCGCTGATGCAAATGGGAAAGATATGCAAAGTTGCTACGAAGCCTCTAGTGGTG ACTTACACTGGTCTAATTCAAGCCTGTCTGGATTCTGGTGACATTCAGAGTGGAGCATAC ATCTTCAACCACATGCACCAGTTCTGCTCCCCAAATTTGATAACTTATAATATAATGCTA AAAGGTTATCTAGATAGTGGGATGTTTGAAGAAGCAAAGCAAATGTTTTTCAAGTTATTG GATAATGGTAACTCTATTAGCAGTAAATTGGACGGTAAGGATAAGGTTTTCCCAGATGTC TACACATTCAACTTGATGTTGGATGCATGTGCTGCTGGAAAGAAATGGGATGATCTCAAG TTTGTGTACTCACATATGCTGAAATATGGATACCACTTCAATGCAAAGCGTCACATTCAG ATGGTACTTGACTCCTGCAGGGATGGAAAGGTGGAATTATTGGAAGCAACATGGAAGGAC TTGGCTCGGGCTGATCGGGTTCCACCAGTGCCACTAGTCAAAGAAATGTTCCGCATGCAG CTGGAAAGAGGGAACATTGCTGCTGCCCTGACTTGTGTTACTGATTATCCTCCTGCTGAG TCTCAGGCATTTTCTGCCAAGTTTTGGATGAAGTTTTTTGAGGAAAATTCTGATCAATTA TCAGACGGTACGCTTTTCAGATTGCTACAAGAGGTGAGCCGGATTGTTGCCAGAAATGAC AGCAAAATACTCAACAATCTAATGGCTTCTTGTAAAGAATTTTTGAGAACTCAATCGACA AAAGTAGATAGAGTTCATAGTGAAACAGCTCTAGTTTGTTAA

Peptide Sequence

PEP ID	Solyc02g069570.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T6B9_RICCO)
Sequence	MVAIILTEALFGASLCTDFNGVFGSNYLRCPCFSSGFSISETPTLEISLGKKKVKKQKRN AGSIVVSCGLDNVINREELEFKPSFDEYLKAMESVKEKKQRDSVRRKKSEEKGKFVKSEK EKCVESSDFVELNEKYEGVGVVKESGGGGGKLEFRMVKNQKRQSISKDKNVDEMVSMERE AFKTMDGDVYDKPRVTKAEMEERIQKLAKCLNGADIDMPEWMFSQMMRSAQIKFSDHSIL RIIQILGRLGNWRRVLQVIEWLRSRERFKSHKLRYIYTAALDALGKANRPVEALNLFNAM QEHITSYPDLVAYRCIAVTLGQAGHMKELFDVIDTMRSPPKKKFKTNIIEKFDPRLEPDV VVYNSVLNACVRRKSWEGAFWVLQQLKLRNEQPSMTTYGLVMEVMFECGKYNLVHDFFKK MQKSCVPNALTYKVIVSTLWKEGKTDEALLAVEDMERRGIVGTASLYYDLARCLCSAGRC EEALMQMGKICKVATKPLVVTYTGLIQACLDSGDIQSGAYIFNHMHQFCSPNLITYNIML KGYLDSGMFEEAKQMFFKLLDNGNSISSKLDGKDKVFPDVYTFNLMLDACAAGKKWDDLK FVYSHMLKYGYHFNAKRHIQMVLDSCRDGKVELLEATWKDLARADRVPPVPLVKEMFRMQ LERGNIAAALTCVTDYPPAESQAFSAKFWMKFFEENSDQLSDGTLFRLLQEVSRIVARND SKILNNLMASCKEFLRTQSTKVDRVHSETALVC*

Transcript Sequence

Transcript ID	Solyc02g069570.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T6B9_RICCO)
Sequence	GGACCCGATTCCGGAAGTGACCAAAACGGCTTTTGAGTTTTGGCTAACCAAAAAGCACTG AACATTCATAACTACATGCCGGGAAAATCCTATCTTTGGTCGCCGGCGGCCGACGGAGCA AACCAGGAAGAAGAAGAAGAATAAAGTGCAGCCTTTAATGCGTGGTTGAGTTGAGATGGT GGCAATTATCTTGACAGAAGCTCTATTTGGAGCTTCACTTTGTACTGATTTCAATGGAGT TTTTGGTTCAAATTACCTCCGTTGCCCTTGTTTTTCATCAGGATTTTCAATTTCCGAGAC ACCCACTTTAGAAATTTCTCTGGGAAAGAAAAAGGTTAAGAAGCAGAAGAGGAATGCGGG TTCCATTGTAGTTTCTTGTGGCTTAGATAATGTAATTAATAGAGAAGAGCTTGAATTCAA GCCTTCATTTGATGAGTATTTGAAAGCTATGGAGTCTGTTAAAGAAAAGAAACAGAGGGA TAGTGTTAGAAGAAAGAAGAGTGAAGAAAAGGGCAAATTTGTGAAGTCTGAGAAGGAGAA ATGTGTAGAAAGTTCTGATTTTGTGGAGCTGAATGAGAAATATGAAGGAGTTGGAGTTGT AAAAGAGAGTGGTGGTGGTGGTGGGAAATTGGAATTTAGAATGGTGAAGAATCAGAAAAG ACAGAGCATAAGTAAGGACAAGAATGTTGATGAGATGGTGAGTATGGAAAGAGAGGCTTT TAAGACAATGGATGGAGATGTTTATGATAAGCCAAGAGTTACTAAGGCAGAGATGGAAGA GAGAATCCAAAAGCTTGCAAAGTGTCTAAATGGTGCGGACATTGACATGCCTGAGTGGAT GTTCTCTCAAATGATGCGAAGTGCTCAGATTAAATTCTCAGATCATTCTATCTTGAGGAT TATCCAAATATTGGGTAGATTAGGAAATTGGAGACGGGTGCTGCAAGTCATTGAATGGCT TCGTTCACGTGAGCGCTTTAAGTCACACAAGTTAAGATATATTTACACGGCTGCACTGGA TGCACTGGGAAAGGCAAATAGGCCAGTGGAAGCACTAAACTTGTTTAATGCAATGCAGGA GCACATAACATCATATCCGGACCTTGTAGCTTACCGTTGTATTGCTGTCACTCTTGGACA AGCAGGACATATGAAGGAACTATTTGACGTCATCGATACCATGCGGTCACCACCCAAAAA GAAGTTCAAGACTAATATAATTGAGAAGTTTGATCCACGACTTGAGCCAGATGTTGTCGT CTATAACTCTGTGCTAAATGCCTGTGTTCGCCGTAAAAGCTGGGAGGGTGCCTTTTGGGT ACTGCAACAGCTAAAGCTCCGGAACGAGCAGCCCTCAATGACAACATATGGATTAGTCAT GGAGGTTATGTTCGAATGTGGCAAATACAATTTGGTTCATGACTTTTTCAAGAAAATGCA GAAGTCATGTGTTCCCAATGCTTTGACCTATAAAGTTATTGTGAGTACTCTTTGGAAGGA AGGGAAAACAGACGAGGCCTTACTGGCAGTAGAAGACATGGAGCGACGAGGAATCGTGGG CACTGCCAGTTTGTATTATGACCTTGCTCGTTGCCTTTGTAGTGCAGGGAGGTGTGAAGA GGCGCTGATGCAAATGGGAAAGATATGCAAAGTTGCTACGAAGCCTCTAGTGGTGACTTA CACTGGTCTAATTCAAGCCTGTCTGGATTCTGGTGACATTCAGAGTGGAGCATACATCTT CAACCACATGCACCAGTTCTGCTCCCCAAATTTGATAACTTATAATATAATGCTAAAAGG TTATCTAGATAGTGGGATGTTTGAAGAAGCAAAGCAAATGTTTTTCAAGTTATTGGATAA TGGTAACTCTATTAGCAGTAAATTGGACGGTAAGGATAAGGTTTTCCCAGATGTCTACAC ATTCAACTTGATGTTGGATGCATGTGCTGCTGGAAAGAAATGGGATGATCTCAAGTTTGT GTACTCACATATGCTGAAATATGGATACCACTTCAATGCAAAGCGTCACATTCAGATGGT ACTTGACTCCTGCAGGGATGGAAAGGTGGAATTATTGGAAGCAACATGGAAGGACTTGGC TCGGGCTGATCGGGTTCCACCAGTGCCACTAGTCAAAGAAATGTTCCGCATGCAGCTGGA AAGAGGGAACATTGCTGCTGCCCTGACTTGTGTTACTGATTATCCTCCTGCTGAGTCTCA GGCATTTTCTGCCAAGTTTTGGATGAAGTTTTTTGAGGAAAATTCTGATCAATTATCAGA CGGTACGCTTTTCAGATTGCTACAAGAGGTGAGCCGGATTGTTGCCAGAAATGACAGCAA AATACTCAACAATCTAATGGCTTCTTGTAAAGAATTTTTGAGAACTCAATCGACAAAAGT AGATAGAGTTCATAGTGAAACAGCTCTAGTTTGTTAACTTTGCTACAGCCCAAAAGAAGA AAAATCATCAGATACTGATCTGTTCTTGAACAAGTGCTCTATTTGTTAAGAGTTAAGAGT CAAGTTCATAATCAACTATTCTTTATCAGTATAATCATATTTGATTGTTTAGTTCAGCAA GAAGTTATTGGAAAGAATTACCTTTGCCAAAATTGATTTCAAATTGTTGGAAATTATCAA ATATACAGAATTTATTACTGATATGGTCGAAGCAACTTCCATTTCTCCAAAAGTGGAGGC AATTATAACACCCAGTTTTCTATATACATCAAGAATAAACACGCAACAAATTCAAATGAG CATAGATGAGGGACGAAGCTATACTGGCCCAGAACTATTATTGATCTAAATATATGTTTT ACTAGACTAAGATACACATCATATATGACTGGATAAATAGGCTGACTAATACACAAAACT GTGTCATGTAATTCAATCTAGATGAACGAAAAAATATAGACCCCTCTTTCGCTTCCAAAA AAACTACTCTAGCAATACTAAAAATCCACGACAATGTTAAGCTGTGTGATGGGGTTCATG TCGATCTTCCACAACGATAAGTTGTCAATGCATTACGAAGACTTGACCAGAGATGAACCA TAACCATTAAGGTGTGATTTCTGCCATCTCCATGCAACCTGCAAACTCTCTTGAAGATCA GTGTGTTGGGCTGTCCAGTTCAGTTCAAGTTTTATCTTAGTAGGATCACTAAAGACTTCT GCATAATCACCAGGGCGACGA