Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g068480.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7JRQ3_MEDTR)
Sequence

ATGACAAAGAAGCGAGAAGTAGAAGATGGCGTGGTGCCTGCGGAGTCGACTGCAAAACGG
CAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTT
CTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGATGGTACGAAAGGACAC
ATTCCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGAC
GATAAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATT
AGGAGGGACTGCCCCTATCTTGATACTGTGAACAGACAGGTATTGGATTTTGACTTCGAG
AAATTTTGTTCGGTCTCTCTTACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAA
TATTTTCAAGGAAGGGGACCAAAATCTCATGCGTATACACACAGTCTTGAAGCAGGACAC
CACGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTC
ATAGATCCATCGCTTGATGACATTATTCATGTGCTGAATCCAAGATTTGCTCAAGAACAG
GTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTT
CCTGGAACGGTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAG
TCATTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAGAATTATCAACAC
AATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCACGCAAGG
AACTTTAAAGGACAGGTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAA
AAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAAT
ACCCTTCACACGGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTT
CAGGGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAG
AATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCT
TTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAG
AATATTATTCCCCAGGTTCCATTATTCAACATACTAAAGAAATTTGATGGTGATACTGTG
ACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGGGATACCGTGTGACAAAATTGCCAAAG
TATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTTATGGAGAAAAATCCT
ACACTTGTGAACTTCCCGGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCA
CCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGAT
GGAAAGCCAGGCGAAGGCTCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTGG
TATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAG
ACTTATATGCAGATATATGAGCAGCATCAGCAGTAA

Peptide Sequence

PEP ID

Solyc02g068480.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7JRQ3_MEDTR)
Sequence

MTKKREVEDGVVPAESTAKRQKVMDQSSPSLPPVAFENPLLPLASYDDDEDDEDDGTKGH
IPEQVINNGGDKEQNGYSSDDKEDEDDGRSQGKRNRAIEIRRDCPYLDTVNRQVLDFDFE
KFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVFINLRTEKVYCLPDGYEV
IDPSLDDIIHVLNPRFAQEQVKQLDKSRQWSRALDGSDYLPGTVGLNNIKETDFVNVTIQ
SLMRVTPLRNFFLIPENYQHNRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASK
KRFRIGAQSDPVEFMSWLLNTLHTELRSSKKGSSIIHRCFQGELEVVKEMHNRSIAEKRE
NGEDGEHESHNTGMETSRMPFIMLGLDLPPPPLFTDVMEKNIIPQVPLFNILKKFDGDTV
TEVVRPRIARMGYRVTKLPKYLILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIPLPA
PKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
TYMQIYEQHQQ*

Transcript Sequence

Transcript ID

Solyc02g068480.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7JRQ3_MEDTR)
Sequence

TCTTTGCTTCTTCTTCTTCTTCTTCTCGAGCTTTCTGCAAAAATTGTATCCAGAACGTTA
ATTTTCCAGTGAATCTTAAATAGTTTGGAGTGAGAAGAGAATGACAAAGAAGCGAGAAGT
AGAAGATGGCGTGGTGCCTGCGGAGTCGACTGCAAAACGGCAGAAGGTAATGGATCAGTC
GTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTTCTTCCACTTGCATCTTATGA
TGATGATGAAGACGACGAGGATGATGGTACGAAAGGACACATTCCTGAGCAAGTTATAAA
TAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGACGATAAAGAAGATGAGGATGA
TGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATTAGGAGGGACTGCCCCTATCT
TGATACTGTGAACAGACAGGTATTGGATTTTGACTTCGAGAAATTTTGTTCGGTCTCTCT
TACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAATATTTTCAAGGAAGGGGACC
AAAATCTCATGCGTATACACACAGTCTTGAAGCAGGACACCACGTGTTCATCAATTTACG
AACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGATGA
CATTATTCATGTGCTGAATCCAAGATTTGCTCAAGAACAGGTTAAGCAACTCGATAAGAG
CCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTTCCTGGAACGGTTGGGCTGAA
TAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAGTCATTGATGCGAGTAACTCC
CTTGAGAAACTTCTTTCTTATCCCTGAGAATTATCAACACAATAGATCTCCTCTTGTTCA
TAGATTTGGAGAGCTTACCCGAAAGATTTGGCACGCAAGGAACTTTAAAGGACAGGTCAG
TCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAAAAACGTTTTCGGATAGGTGC
CCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAATACCCTTCACACGGAGCTTAG
AAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTTCAGGGGGAATTGGAGGTTGT
GAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACA
TGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGA
TTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAGGTTCC
ATTATTCAACATACTAAAGAAATTTGATGGTGATACTGTGACTGAAGTTGTAAGGCCCCG
TATAGCAAGGATGGGATACCGTGTGACAAAATTGCCAAAGTATCTAATTCTCCACATGCG
TAGGTTTACAAAGAACAATTTCTTTATGGAGAAAAATCCTACACTTGTGAACTTCCCGGT
GAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCACCAAAGGAGAATGAGAAACT
TCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGATGGAAAGCCAGGCGAAGGCTC
ATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTGGTATGAGATGCAAGACCTACA
TGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAGACTTATATGCAGATATATGA
GCAGCATCAGCAGTAATGAACCTCACAAGTAACATCAGAAACATCAACCTCTGCCTCTCC
TCTTCTTTTTGAAATGCCAATTTCGACTTTTAGATATCTAATGAAGAGTATTCTACTCGT
TGAGGGATAGTGATCTTTGCGATTTATTTTTCCTTTGTTGTATGTAAATCCTGCTGTTTT
TGTGTTGCTTATGCTTAAGATTACTATTACATGGGGAATTATGAGAACTCTAGCTTTGGA
TTTATCCACTTGCTATTTTTTCTTCCATTTGTAGGAATATATATCTTCTTATGAATTCCA
ACTGAAATTTTAGTAAATTAAGATTGGAGTTAGATTTTAACTTCTTCAGATGTATACTGT
TTGGTTATTTTAAAAACTTATATTAGGATCAAATATCTCTTAAAATCAGTTAA