Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g068380.3.1
CDS Infomation

allantoate amidohydrolase (AHRD V3.3 *** AT4G20070.1)
Sequence

ATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATG
AAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAAC
ACATCATTTGGTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTC
AAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAGGTAAGTGATGCAAATGGCTAC
CTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGG
ATGGAAGATGCAGGCTTGAAAACGTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCT
GAAGGAATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCTCATTTGGATACAGTTATT
GATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCA
CTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAGGTAATCGCATTTAGT
GATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATA
TTACCAGTTTCAGCGTTGCAAGTACATGATAAGAATGGTGTGACAGTGCAAGGTGCTCTG
AGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAA
TCTGTTTGGGGCTATGTTGAGGTTCACATTGAACAGGGACCTGTACTGGAGAATGTCGGT
CTCCCTCTTGGTTCAGTAAAAGGCATTGCAGGGCAGACAAGATTGAAGGTGACAGTGAAA
GGCACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCA
GCTGCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCA
TATGATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACT
GTTGGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAGGTCACATTC
ACCGTAGATGTACGTGCGATGGATGACTTAGGACGAGAAGCTATAATTTATGAATTCTCT
AATAGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAACGTTGAGAGAAAGCAT
GATGCAAATGCTGTGGTTTGCGATCCTAGCCTGAGTAGACAGCTAAAATCTGCATCTTAT
ACTGCTTTGAAAAGAATAACTGATGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGA
GCAGGACATGATGCAATGGCCATGTCTCATCTAACCAAGGTGGGAATGCTATTTGTGCGT
TGTCGCGGAGGCATCAGCCATTCTCCAGCAGAACATGTATTGGATGATGATGTTTGGGCA
GCTGGAATGGCTGTCCTTGCATTTTTGGAGACACTCTTGTAA

Peptide Sequence

PEP ID

Solyc02g068380.3.1
PEP Infomation

allantoate amidohydrolase (AHRD V3.3 *** AT4G20070.1)
Sequence

MAAPPPSITFSFPVPHAIMMKSMSILSFILLLSPLFAMANTSFGAENTEGIKYDLFPEIL
KEEAVGRLNELGKVSDANGYLERTFQSPASVRAGNLLRAWMEDAGLKTWVDQMGNVHGRA
EGINPSEKALLIGSHLDTVIDAGFFDGSLGIICAISALKALNSSGRLGKLRRPVEVIAFS
DEEGVRFQSTFLGSAAIAGILPVSALQVHDKNGVTVQGALRASSIETTEENLLQLKYEPE
SVWGYVEVHIEQGPVLENVGLPLGSVKGIAGQTRLKVTVKGTQGHAGTVPMNMRQDPMVA
AAELIVFLESLCKQPDYYLSYDGQCTSSTVESLAGSLVCTVGEISTWPSASNVIPGQVTF
TVDVRAMDDLGREAIIYEFSNRLYHMCDRRSVFCNVERKHDANAVVCDPSLSRQLKSASY
TALKRITDEDPGDVPVLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWA
AGMAVLAFLETLL*

Transcript Sequence

Transcript ID

Solyc02g068380.3.1
Transcript Infomation

allantoate amidohydrolase (AHRD V3.3 *** AT4G20070.1)
Sequence

GCGGTGAAAAAATTGCTAGGTTGTAAATAGTTGAGTATATAGTAGTGGTCTGTATTGGAT
TTCGACGATCTAAGTTCATTTTATCTTCTCTCATTCCAATTTTGGAGTGCCGTGGCGTTG
TTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATT
ACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTC
ATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTGGTGCTGAAAATACA
GAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTT
AATGAGCTTGGAAAGGTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCT
GCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAACG
TGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAAGGAATTAATCCAAGTGAAAAG
GCTTTGTTAATTGGCTCTCATTTGGATACAGTTATTGATGCTGGATTCTTTGATGGTTCA
TTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGT
AAACTCCGGCGGCCAGTTGAGGTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAG
TCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTA
CATGATAAGAATGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACA
GAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCTGTTTGGGGCTATGTTGAGGTT
CACATTGAACAGGGACCTGTACTGGAGAATGTCGGTCTCCCTCTTGGTTCAGTAAAAGGC
ATTGCAGGGCAGACAAGATTGAAGGTGACAGTGAAAGGCACACAAGGACATGCAGGGACA
GTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCTGCTGAACTAATTGTATTTCTG
GAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATATGATGGTCAATGCACATCTTCA
ACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTTGGAGAGATATCAACTTGGCCA
AGTGCAAGTAATGTCATTCCAGGCCAGGTCACATTCACCGTAGATGTACGTGCGATGGAT
GACTTAGGACGAGAAGCTATAATTTATGAATTCTCTAATAGACTCTACCATATGTGTGAT
AGGCGTTCTGTCTTCTGTAACGTTGAGAGAAAGCATGATGCAAATGCTGTGGTTTGCGAT
CCTAGCCTGAGTAGACAGCTAAAATCTGCATCTTATACTGCTTTGAAAAGAATAACTGAT
GAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCAGGACATGATGCAATGGCCATG
TCTCATCTAACCAAGGTGGGAATGCTATTTGTGCGTTGTCGCGGAGGCATCAGCCATTCT
CCAGCAGAACATGTATTGGATGATGATGTTTGGGCAGCTGGAATGGCTGTCCTTGCATTT
TTGGAGACACTCTTGTAATTGTTGGCATTTTGCAATGCAAACTAGTAGGCTAGTTTGCTA
TTCATAATCCCATTTTTGTATATATATGTATCCATTCAATTTCTATAGTTGTAGTAATGA
GAATGTATATTTGCAATAAAACAAGTTGACCTGTTACTTAATTTGAACTACCTTTTATCA
GAAGTCTCGATTCGAGTTAGCGGCGATATGACATGCAATGATGAGAACATACAGTAACCA
ATAACCTCGCTAAAACTTTCGAAAAAATTTAAGTACTTGTTGAAAAATTATGTAAGTGGT
TAATGGTGTCAAAAATTGGTTTAGCTCGTAGTTTAAACTCTTTGAGTTTACGCATTGCGG
ATGCTTTTTTTGTTTGAGAAATGGCTAACTGGTGAAAAAAGAAAAAGAGTAAAGAGTTCA
CATTTGGAGTCTCCAATGGTTAGTTGAATTTTCTTTGAAGAAGAAAGTGTTTGTTCAGAC
AGAGTAGTTAATTTCTCACCTTATGTTTGTCCCCACCATTTTTAATGACTTCCTTCAAAT
TTAAGGAACAACATTTTTCTTAATATAAAAATTTTGGATTAGATTTTAAAAAAGAT