Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g068310.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G14130.1)
Sequence

ATTCATTTTAAAACAAAAAGAATAATTTTTCTGATCAGATTTTCTTACCTATTAACATTA
CATATAGAAACCGAAGTTCCAAAAAAAGAAGAAAAAAGTTAAGAGCAAAAACACAAAATG
GAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGATGATTTTCCAAGGCAATTGTCCAAG
TTAATTTGGGCCTGTGAAGAATGGGGTTGTTTCAGAATTTTGAACCATGATAAAATCCTT
CCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTTATCTTCCAACT
GAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAA
AAAAACCCTCTTTATGAAGCTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGAT
GAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGAGAGACAATTAAGAAGTATGCT
GCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTG
CCAAATGTTTCTTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACAACTTCACG
CCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATT
CTACAGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTA
GCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGGTATGG
AGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGG
GTATCTATTGCTTCATTCATCTTGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAG
CTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGAAAG
CTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTG
TAA

Peptide Sequence

PEP ID

Solyc02g068310.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G14130.1)
Sequence

IHFKTKRIIFLIRFSYLLTLHIETEVPKKEEKS*EQKHKMESENSVPVIDLDDFPRQLSK
LIWACEEWGCFRILNHDKILPVSLMAEMKEVVRALFYLPTEIKKRNKDVLVGSGYMAPSE
KNPLYEAFGLYNMSCHEDLDEFCTQLDASPHQRETIKKYAAAINGLMMDILRKMSEGLGL
PNVSFEDWPCQFRINKYNFTPEVVGSSGVQIHTDLAFLTILQDDESVGGLEVMKKSGEFV
AVDRWPNTLLVNLGDIGTVWSNGRLHSVKHRVICKEAKLRVSIASFILGPRDTAVEPPSE
LVDAEHPRMYVPFTFTDYRKLRYSTKLQAGETLELMRTNL*

Transcript Sequence

Transcript ID

Solyc02g068310.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G14130.1)
Sequence

ATTCATTTTAAAACAAAAAGAATAATTTTTCTGATCAGATTTTCTTACCTATTAACATTA
CATATAGAAACCGAAGTTCCAAAAAAAGAAGAAAAAAGTTAAGAGCAAAAACACAAAATG
GAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGATGATTTTCCAAGGCAATTGTCCAAG
TTAATTTGGGCCTGTGAAGAATGGGGTTGTTTCAGAATTTTGAACCATGATAAAATCCTT
CCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTTATCTTCCAACT
GAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAA
AAAAACCCTCTTTATGAAGCTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGAT
GAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGAGAGACAATTAAGAAGTATGCT
GCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTG
CCAAATGTTTCTTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACAACTTCACG
CCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATT
CTACAGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTA
GCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGGTATGG
AGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGG
GTATCTATTGCTTCATTCATCTTGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAG
CTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGAAAG
CTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTG
TAAAACTTTGGCAAGCATCTAAGATCCTCCGTTATATTGATTTACAGAAATGATCTTGAA
AGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAA
GCTACAATAGCCTATAAAATGGCAGAGCATTTATGCATATCAGCAAAGCTTCTATTATCC
ATCTTTGTATTGTGTGTTCTTCTGTTATCTATTGCTTTTTAAAGAATAGAACAGGTCTTA
TCTTTCATTACAATTTGAGATCTTGGAATTCTTTAAGTTGTATGTAGTAGTACAGTTGAG
GCAACAAAGATACTTCGCCACCGTTTGTTTCCTTTTACATAATTTTGGTTGACAAAGACA
GGAAAACAGTAAATATGACATAATGTAACACTACTGAGTTATATGAATGTACATAGGCTG
CCTGATCTTTTCATCATGCTCCATTAACAAATTGAAAAGAAGAAAAATAACATCAAACAA
AAAGTGAAAAACTGAAGGAAATTTTTAACCTCCTCCCAGGAAAACATAATTACAGGAAAT
ATTTTTAAAAAATTGAAGGCCAAAAAAATCAATTTTCCTTTTGGTAATAGTTGTTTACCA
TCAAGTAACTACACCAAAGAGTGATCTGCATATGTTGGGGTCTCCCTGCTTTGATAGTCT
AGACTCCATCCTGAATTGAAGTGAGAAGTAGTAATGGATGTTGTGTCCATAACACTTGAG
TCTATGTCAATTGGCACCATTGATGGCCACACAAATGCTGGCTTGAATGGTGGAACTTCT
GGTGCTGGTGCTGACCCTGATATAATCTGAACTATTGCCTGTGTTTTAGGCCTGTCAGTA
GCTATAGGATGTGCACAAGCCAAACCAAGTAGTAAAAGTTTCTTTGCTTCATCAGCAACA
TAGTCATCTCCAAGCCTTGGATCAACAGCTTCCAAGATACGGCCATCGCGGTGCAAGTAC
CAAACCCAATCAACAAAGAATTGAAAGCCATTAATCTTGGTTCCAGGTCTCTGGCCACAT
ACAACTTCCAATAACACTGCCCCAAACGCGTACACATCAGATTGCTGTGTGGCTTTCCCT
GTGTGGAAACACTCTGGTGCAATGTATCCCATTGTACCAAGCACTCCTTCTGCCTCAGCA
TACGAGGTCCTTTCGTTGTCAAGTGCTCGCGCAAGGCCAAAGTCCCCAAGGCGCGCATTG
AACTTTGAGTCAAGCATGATGTTACTCGCCTTCAGGTCGCGATGGACCACCCTCTGCTCA
TACTCATTGTGCAGATAATGTAATGCTGAGGCCACACCTTGCACAATCTTGTAGCGGACG
TGCCAGCTCAGCGGCTCTTTATCTGGGCCCGCAAAGAGGTGCATATCTAGACTGCCATTA
GGCATGTATTCATATACAAGCAGTAGCTTTCCATTCTTGTGACACCATCCTGTCACCATA
ACATGCAATCTTGTAAGATGCTTATGTTTGTTTTTTAATCAGTAAAAATAACTAGATACA
GAAGTTGCACACTACCCAAATTGTCAACTTTTTGTTGTATTTTACAAACCTTATCTCTTT
GTAGGGCCAGATGACAAGAGTAGGTGACACAAAGATTAGGTGTTTGAAGATATGAATGTA
TACTAAAATACAGAATTAATGTCCTTTTCATTGGATTTAATTTATCATCATTCAACTAAC
ATCCAAAACTTGTGTTAATCATTGACAATGAATGAAAGGGATGTTAGGACAAGAAGGAAG
CTTCACAAAATTTTGACATAAAAAAATTGTATTGAACTTTGACGAATGGCTGCTTTATTC
CATGGTCAACAAAGGATGATCATCTTCTTTTAAGCAAATCAAAATGAAGCACTTCAAGAT
AGTGCCTTGTTCTTCTAAATTGGAGGGACCATAGCAACAAGTTGGTTCTTGGTCAAAACT
TTTAAGGCATTCCATTAGTTTTTCTAACTTCCTTGATATTTTTGGCTTGAACTCTTACGT
ACCATCAACTATTAAAACATTTACTGTAGTAGAGTGTGG