Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g067660.3.1
CDS Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)
Sequence

ATGAGCCAAGTTTCCTTGTTCAGTAGTGGCCAAGAATTGGCAAATTTGTTTCTGAGCTCA
GATCTACTTCATCATTCTTGGATCACAATCTCTGCCCTTAGCAGTCATCCTTATATCAAT
AAACCAATTTTGTTTAAAGTTTACCCATATCATTCAAATGGTGCTATTGTTGCTTTTGTA
TCCTCTCCCACTTGTAATCTTCAGAAAGAAATGGTCTCTTCAGAAGAGCTTCAAGGCTCT
CAATCTCCTTTTGACTTCATTTCTACCAAACTCAACCCTCATTTCTCAGTTAACAAAGCT
GCAATAACCCTTTTTGCTTCATTACTGAATGACCTCTCTGCCCTCAAAGAACAGTTGGAC
AGTTTTAGTCCTCTAATAATCACTGGAGTTTCGTTGGGAGGTTCTGTGGCATCTCTATTC
ACTCTCTGGCTACTTAAGGACAGTAATAAGCGTCCCACTTGTATCACTTTTGGTTCACCT
CTTCTTGGAGATAGTGGCCTGCAACAAGCCATATCAGAACGTCCATCATGGAATTCAAGC
TTCTTGCACGTAGTCTCCAACCAAGATCCAATCCCAAGATCTTTAATTTCACCTACTAAT
GTCTTTGCTGGTTCTATTCCCCAACCATGTATTTACATGCCATTCGGTATGTTCCTGCTG
TGCTCAGATTCAGACTGCTCTTGTTTTGAGGAACCTGAATCAGTTTTGGATCTTATGACG
GAAATGAACTTAAATAGCCAACACCAGGACAATCATTCCTTGGCTTTCGACTATGAGCAG
GTTTTGGAACGCCTCAAGCATAGAGTAATCCTTAAGGGAGCTTCTCAGTTGTTTCAGTTT
AGCGTGGATCAACTTCAAGCAGGTATTGATCTACAGCTAGAAGCAATCGGAATTGGTGGA
CAGCAGACCAGTAACATGAACTCTATAAGGACTAAAGTGAAGAAAAGAGTGGAAGAATCT
TTTGCAAAGAAGAGGAATGCCTTTGATCCTGGGAAGAAGCTAAACAAAATGAAAGAAGCT
ATGACATGGCTAGAGTGGTACAAGAAAGTAACCCTGAAAGAAGGAGGCTACTATGATAGT
TACAAACGCAGTGAGTATCGAGGCAGGGATGCTGTCAAAAGCAGACAAGAAATTGTCAAG
CACCAAAGAGTCCTCACTAAGTACTGGAAAACAATGGTTGCAGAAGCAGAGAAAATGCCA
CAAAGAGAGGAGGCAGTTTTTCGTACTCGTTGGCTGTATGCAGGGACAAACTATAGAAGG
ATGGTCGAACCACTCGACATAGCTGCATACTATATGAAACCAGGGAACACAGACTATGTA
AATCTTGGTAGATCCGAGCACTATAAAAAGTTGGAGGAATGGAGGAGAGAAGACAACCCG
TCTGGAAGTGGTAACGATAGAAGGAAGTGTGTTAGCCTCACCGAAGATTCGTGCTTTTGG
GCATATGTGGAGGAAGCTATTATAAATTCCAAAAGACTGAGAGAAGGGAGTCTACAAGAG
AAGGAAAATGCAAGGGAGTATTTGGTTAATTTTGGGGGATATGTTATGAATATGATAAGG
AGTTATTCAGTATCCTCTGATATTTTCCAGCTTCATAGTAGCTTCATGAATTGGTGGCAA
GAATATAGGCAAGATATTCTAAGCTGTTTGAGTAATTTGCCTTTGGCATTTTACATGGAA
AATGGAGAATACAAAAGTTATGCTTAG

Peptide Sequence

PEP ID

Solyc02g067660.3.1
PEP Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)
Sequence

MSQVSLFSSGQELANLFLSSDLLHHSWITISALSSHPYINKPILFKVYPYHSNGAIVAFV
SSPTCNLQKEMVSSEELQGSQSPFDFISTKLNPHFSVNKAAITLFASLLNDLSALKEQLD
SFSPLIITGVSLGGSVASLFTLWLLKDSNKRPTCITFGSPLLGDSGLQQAISERPSWNSS
FLHVVSNQDPIPRSLISPTNVFAGSIPQPCIYMPFGMFLLCSDSDCSCFEEPESVLDLMT
EMNLNSQHQDNHSLAFDYEQVLERLKHRVILKGASQLFQFSVDQLQAGIDLQLEAIGIGG
QQTSNMNSIRTKVKKRVEESFAKKRNAFDPGKKLNKMKEAMTWLEWYKKVTLKEGGYYDS
YKRSEYRGRDAVKSRQEIVKHQRVLTKYWKTMVAEAEKMPQREEAVFRTRWLYAGTNYRR
MVEPLDIAAYYMKPGNTDYVNLGRSEHYKKLEEWRREDNPSGSGNDRRKCVSLTEDSCFW
AYVEEAIINSKRLREGSLQEKENAREYLVNFGGYVMNMIRSYSVSSDIFQLHSSFMNWWQ
EYRQDILSCLSNLPLAFYMENGEYKSYA*

Transcript Sequence

Transcript ID

Solyc02g067660.3.1
Transcript Infomation

Phytoalexin-deficient 4-1 protein (AHRD V3.3 *** Q2TNK3_SOLTU)
Sequence

GAATCGAAGGGAGTGTTAGTTATACTAGTAGACTTGAGAGTCAAGCAAAATCAAGAAGTA
AACCATCCGTCCCTTCTTCTCCTTCAATTTCTGGGCATTTTCTTCTAGTCCTTTACATCT
ACTTTTCTCATTTGTCAAACTTGTATGTTAACTTTATCTTCTACTACTATGCTTATTTAT
ATTAAATGTTAGCTATGCCTTTAGGAATATCTCAAATTCTCCAAAGGCCAAGATGAGCCA
AGTTTCCTTGTTCAGTAGTGGCCAAGAATTGGCAAATTTGTTTCTGAGCTCAGATCTACT
TCATCATTCTTGGATCACAATCTCTGCCCTTAGCAGTCATCCTTATATCAATAAACCAAT
TTTGTTTAAAGTTTACCCATATCATTCAAATGGTGCTATTGTTGCTTTTGTATCCTCTCC
CACTTGTAATCTTCAGAAAGAAATGGTCTCTTCAGAAGAGCTTCAAGGCTCTCAATCTCC
TTTTGACTTCATTTCTACCAAACTCAACCCTCATTTCTCAGTTAACAAAGCTGCAATAAC
CCTTTTTGCTTCATTACTGAATGACCTCTCTGCCCTCAAAGAACAGTTGGACAGTTTTAG
TCCTCTAATAATCACTGGAGTTTCGTTGGGAGGTTCTGTGGCATCTCTATTCACTCTCTG
GCTACTTAAGGACAGTAATAAGCGTCCCACTTGTATCACTTTTGGTTCACCTCTTCTTGG
AGATAGTGGCCTGCAACAAGCCATATCAGAACGTCCATCATGGAATTCAAGCTTCTTGCA
CGTAGTCTCCAACCAAGATCCAATCCCAAGATCTTTAATTTCACCTACTAATGTCTTTGC
TGGTTCTATTCCCCAACCATGTATTTACATGCCATTCGGTATGTTCCTGCTGTGCTCAGA
TTCAGACTGCTCTTGTTTTGAGGAACCTGAATCAGTTTTGGATCTTATGACGGAAATGAA
CTTAAATAGCCAACACCAGGACAATCATTCCTTGGCTTTCGACTATGAGCAGGTTTTGGA
ACGCCTCAAGCATAGAGTAATCCTTAAGGGAGCTTCTCAGTTGTTTCAGTTTAGCGTGGA
TCAACTTCAAGCAGGTATTGATCTACAGCTAGAAGCAATCGGAATTGGTGGACAGCAGAC
CAGTAACATGAACTCTATAAGGACTAAAGTGAAGAAAAGAGTGGAAGAATCTTTTGCAAA
GAAGAGGAATGCCTTTGATCCTGGGAAGAAGCTAAACAAAATGAAAGAAGCTATGACATG
GCTAGAGTGGTACAAGAAAGTAACCCTGAAAGAAGGAGGCTACTATGATAGTTACAAACG
CAGTGAGTATCGAGGCAGGGATGCTGTCAAAAGCAGACAAGAAATTGTCAAGCACCAAAG
AGTCCTCACTAAGTACTGGAAAACAATGGTTGCAGAAGCAGAGAAAATGCCACAAAGAGA
GGAGGCAGTTTTTCGTACTCGTTGGCTGTATGCAGGGACAAACTATAGAAGGATGGTCGA
ACCACTCGACATAGCTGCATACTATATGAAACCAGGGAACACAGACTATGTAAATCTTGG
TAGATCCGAGCACTATAAAAAGTTGGAGGAATGGAGGAGAGAAGACAACCCGTCTGGAAG
TGGTAACGATAGAAGGAAGTGTGTTAGCCTCACCGAAGATTCGTGCTTTTGGGCATATGT
GGAGGAAGCTATTATAAATTCCAAAAGACTGAGAGAAGGGAGTCTACAAGAGAAGGAAAA
TGCAAGGGAGTATTTGGTTAATTTTGGGGGATATGTTATGAATATGATAAGGAGTTATTC
AGTATCCTCTGATATTTTCCAGCTTCATAGTAGCTTCATGAATTGGTGGCAAGAATATAG
GCAAGATATTCTAAGCTGTTTGAGTAATTTGCCTTTGGCATTTTACATGGAAAATGGAGA
ATACAAAAGTTATGCTTAGAACTACTTTAGTTGCATACTTAATAAGATTGGCATGTAACA
ATGTATCCCTTCCTGTTTATAATGAAGTTTTATCTTACTGGATTTTACTTTTCAGCTGTA
ATATCTTAAGAAGCTTGAATATCAATTTTCAAATTGTTTGGGGACTATTTTGAGGTGAAT
TTGAGCTGATTTTCAAATTAAAAACTTGAGGTTGAAAACGACTGCATCTATGTATATCCC
CTTTGTATCTCCTATATATCATGTATAACATACACATATTACATATATCCATGAAAATAT
GGGTATGATCAGTGATATACACGGTATATATACATGTGAT