Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g067640.3.1
CDS Infomation	Polygalacturonase 1 (AHRD V1 ***- O22311_SOLLC)%3B contains Interpro domain(s) IPR000408 Regulator of chromosome condensation%2C RCC1 IPR000743 Glycoside hydrolase%2C family 28
Sequence	ATGAGTCCCTTAGCAATTTTCTTCCTCTTTTTAATCAACTCATCATTAGCAGCAAATACC AATATTTACGATGTCCAAAATTATGGAGCAAAATCCGATGGAAAAACTGATTCATCAAAA GCCTTTTTGAATGCATGGGCAGCAGCCTGTGCTTCTAATACCCCTTCCACTATTAATGTA CCAGCTGGAAAATACTTAATTCACAATGCAAACTTCAATGGACAAACATGCAAGAGCAAA GCTATTACCATGCACATTGATGGGACTCTCTTAGCTCCATCTGATTATAATGTGATTGGC AATGAAGAAAATTGGATAAAATTTGAAAAAGTCAATGCCCTTTCCATCTATAGTGGTACC TTTGATGGTCAAGGTGCTTCTCTTTGGGCTTGCAAGAACCCCAACAACAAGAATTGCCCT GATGGAACTACGGCATTGACTTTTTACAACTCAAACAACATTATAATGAGTGGAGTAACA GTACAAAATAGCCAAAAGTTTCAAATTTTGGTAGACGGATGTCGTAACGTAAAGCTTCAA GGAGTAAAGGTATCAGCTCCAGGAAATAGTCCCAACACAGATGGAATTCATGTAAAATTA TCATCTGGAGTTAGCATTATAAACTCACATATTGGTACTGGAGACGATTGCATCTCTATT GGCCCTGGAACTTCAAACTTATGGATTGAAGGCATTGCTTGTGGCCCTGGCCATGGAATA AGCATTGGAAGCTTAGGCTGGAAACAACAAGAGTTGGGAGTCCAAAATGTGACAGTTAAG ACTGTGACTTTTAGTGGAACAACAAATGGTGTGAGAGTGAAAACATGGGCAAGGCCAAGC AATGGCTTTGTTAGAAATATTCTGTTTCAACATATTGTTATGGTTAATGTTAAAAACCCA ATCATCATAGATCAAAATTATTGTCCTAATCATGAAAGTTGTCCTCATCAGGGTTCTGGT ATAAAGATAAGCGATATAACATATCAAGACATACATGGAACATCAGCTACAAAGATCGCA GTAAAACTTGATTGTAGCAAAACTAATCCGTGCAGCGGCATAACACTTGAAGGTGTGAAT CTTAGTTATCAAAATCAGCAGACTGAAGCTTCATGTGTTAATGCAAGAGGAAGAGTTTCT GGTTTACAAAAAACTACCAATTGCCTATTGGAAAATTAG

Peptide Sequence

PEP ID	Solyc02g067640.3.1
PEP Infomation	Polygalacturonase 1 (AHRD V1 ***- O22311_SOLLC)%3B contains Interpro domain(s) IPR000408 Regulator of chromosome condensation%2C RCC1 IPR000743 Glycoside hydrolase%2C family 28
Sequence	MSPLAIFFLFLINSSLAANTNIYDVQNYGAKSDGKTDSSKAFLNAWAAACASNTPSTINV PAGKYLIHNANFNGQTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNALSIYSGT FDGQGASLWACKNPNNKNCPDGTTALTFYNSNNIIMSGVTVQNSQKFQILVDGCRNVKLQ GVKVSAPGNSPNTDGIHVKLSSGVSIINSHIGTGDDCISIGPGTSNLWIEGIACGPGHGI SIGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNILFQHIVMVNVKNP IIIDQNYCPNHESCPHQGSGIKISDITYQDIHGTSATKIAVKLDCSKTNPCSGITLEGVN LSYQNQQTEASCVNARGRVSGLQKTTNCLLEN*

Transcript Sequence

Transcript ID	Solyc02g067640.3.1
Transcript Infomation	Polygalacturonase 1 (AHRD V1 ***- O22311_SOLLC)%3B contains Interpro domain(s) IPR000408 Regulator of chromosome condensation%2C RCC1 IPR000743 Glycoside hydrolase%2C family 28
Sequence	ATGAGTCCCTTAGCAATTTTCTTCCTCTTTTTAATCAACTCATCATTAGCAGCAAATACC AATATTTACGATGTCCAAAATTATGGAGCAAAATCCGATGGAAAAACTGATTCATCAAAA GCCTTTTTGAATGCATGGGCAGCAGCCTGTGCTTCTAATACCCCTTCCACTATTAATGTA CCAGCTGGAAAATACTTAATTCACAATGCAAACTTCAATGGACAAACATGCAAGAGCAAA GCTATTACCATGCACATTGATGGGACTCTCTTAGCTCCATCTGATTATAATGTGATTGGC AATGAAGAAAATTGGATAAAATTTGAAAAAGTCAATGCCCTTTCCATCTATAGTGGTACC TTTGATGGTCAAGGTGCTTCTCTTTGGGCTTGCAAGAACCCCAACAACAAGAATTGCCCT GATGGAACTACGGCATTGACTTTTTACAACTCAAACAACATTATAATGAGTGGAGTAACA GTACAAAATAGCCAAAAGTTTCAAATTTTGGTAGACGGATGTCGTAACGTAAAGCTTCAA GGAGTAAAGGTATCAGCTCCAGGAAATAGTCCCAACACAGATGGAATTCATGTAAAATTA TCATCTGGAGTTAGCATTATAAACTCACATATTGGTACTGGAGACGATTGCATCTCTATT GGCCCTGGAACTTCAAACTTATGGATTGAAGGCATTGCTTGTGGCCCTGGCCATGGAATA AGCATTGGAAGCTTAGGCTGGAAACAACAAGAGTTGGGAGTCCAAAATGTGACAGTTAAG ACTGTGACTTTTAGTGGAACAACAAATGGTGTGAGAGTGAAAACATGGGCAAGGCCAAGC AATGGCTTTGTTAGAAATATTCTGTTTCAACATATTGTTATGGTTAATGTTAAAAACCCA ATCATCATAGATCAAAATTATTGTCCTAATCATGAAAGTTGTCCTCATCAGGGTTCTGGT ATAAAGATAAGCGATATAACATATCAAGACATACATGGAACATCAGCTACAAAGATCGCA GTAAAACTTGATTGTAGCAAAACTAATCCGTGCAGCGGCATAACACTTGAAGGTGTGAAT CTTAGTTATCAAAATCAGCAGACTGAAGCTTCATGTGTTAATGCAAGAGGAAGAGTTTCT GGTTTACAAAAAACTACCAATTGCCTATTGGAAAATTAGATAAACTAAATTTGTTTGTAA TTCAAAAAAATGAAATTGAAGTTGTGATTACATTATAAAGAATATTCGATTGTATTGTTG AAAATTCAATCTGTCCATCATGTATCAATTATATTAAATGAATTAATTGATATCATATTC CTCTTTTAATTATAAAATCGACCAAATTAATTTGGCCATAAACTCTATTTTTCATATCGA TCAGCTGTTGCCTAGGGAGGTGT