Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g067030.3.1
CDS Infomation

SNF1
Sequence

ATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAA
CTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTA
ACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATG
GAGGAGAAAGTCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATA
CGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAA
TCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGT
AACTTTTTTCAGCAGATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCAT
AGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGAT
TTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCA
AACTATGCTGCCCCAGAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTA
TGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAA
AACATACCCAATCTTTTTAAGAAAATAAAGGGTGGAATATATACTCTGCCCAGCCATTTA
TCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATG
ACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCC
GTGCCTCCACCAGATACAACCCAACAAGCAAAGAAGATCGATGAAGAGATTCTTCAAGAG
GTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAA
AATGAGGGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGC
TATCTTGGAGCTGAATTTCAGGAGTCCATGGAATATGGTTACAACCGGATCAATTCTAAT
GAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCT
GGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGTCTCGAGCGCAT
CCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAA
AAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAA
GGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATT
GAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAGCTTTACAAA
ACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTC
CTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAA

Peptide Sequence

PEP ID

Solyc02g067030.3.1
PEP Infomation

SNF1
Sequence

MDGTAVQGTSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTLTGHKVAVKILNRRKIRNMDM
EEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEAR
NFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSP
NYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHL
SAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTTQQAKKIDEEILQE
VVKMGFDRNNLTESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESMEYGYNRINSN
ETAASPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWK
KIGQYNMKCRWVPSLPGHHEGMGVNSMHGNQFFGDDSSIIENDGATKLTNVVKFEVQLYK
TREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL*

Transcript Sequence

Transcript ID

Solyc02g067030.3.1
Transcript Infomation

SNF1
Sequence

TTTCTAGTATTTTTAAGAAGTTTTTTTTTTTCTGTGAATACCAGGGGGGAAAAATTAACA
GAATCAAAAATCAGTGAACTCCATTCTTGTGCTTCTGCAGCCATCCTTACCCCCACCCCC
CGAATCTCCTCCACCCCACGACTGGCCTCAACTTCTTCCCCCTGTATTCCAGGAGGCCAT
TGATACTCTCTTTCATCACCAAATGTTGAAGATAATCGCTTGATTTTCCCAATTTTCATA
TTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAGGAAAATGGA
CGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGG
GAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGG
GCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGA
GAAAGTCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCT
TTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGG
CGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTT
TTTTCAGCAGATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGA
CCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGG
TTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTA
TGCTGCCCCAGAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAG
CTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACAT
ACCCAATCTTTTTAAGAAAATAAAGGGTGGAATATATACTCTGCCCAGCCATTTATCAGC
TGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTAT
TCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCC
TCCACCAGATACAACCCAACAAGCAAAGAAGATCGATGAAGAGATTCTTCAAGAGGTGGT
TAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGA
GGGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCT
TGGAGCTGAATTTCAGGAGTCCATGGAATATGGTTACAACCGGATCAATTCTAATGAAAC
CGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGC
AAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGTCTCGAGCGCATCCACG
TGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGAT
TGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCAT
GGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAA
TGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAGCTTTACAAAACCAG
GGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGA
TCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCT
AAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTG
TCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTT
GATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTA
CAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCC
CTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTT
GAAATGTTTGTCTGAATAAAAACAAGTCC